Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 BNIP3P30-201ENST00000601184 574 ntBASIC1.73□□□□□ -2.13
RETP07949 RNU6-91P-201ENST00000607774 107 ntBASIC1.73□□□□□ -2.13
RETP07949 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.73□□□□□ -2.13
RETP07949 MIR5739-201ENST00000619803 80 ntBASIC1.73□□□□□ -2.13
RETP07949 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.73□□□□□ -2.13
RETP07949 AC139792.3-201ENST00000623525 224 ntBASIC1.73□□□□□ -2.13
RETP07949 AC124864.2-201ENST00000624736 186 ntBASIC1.73□□□□□ -2.13
RETP07949 AC068137.4-201ENST00000638485 296 ntBASIC1.73□□□□□ -2.13
RETP07949 RNU1-23P-201ENST00000363361 144 ntBASIC1.72□□□□□ -2.13
RETP07949 RNU6-529P-201ENST00000363383 104 ntBASIC1.72□□□□□ -2.13
RETP07949 RNU6-72P-201ENST00000384285 79 ntBASIC1.72□□□□□ -2.13
RETP07949 RNU6-1158P-201ENST00000391167 107 ntBASIC1.72□□□□□ -2.13
RETP07949 RNU6-903P-201ENST00000391270 109 ntBASIC1.72□□□□□ -2.13
RETP07949 MTCO3P40-201ENST00000392516 676 ntBASIC1.72□□□□□ -2.13
RETP07949 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
RETP07949 UBE2V1P10-201ENST00000414685 269 ntBASIC1.72□□□□□ -2.13
RETP07949 VN1R36P-201ENST00000414936 291 ntBASIC1.72□□□□□ -2.13
RETP07949 EDDM3CP-201ENST00000415977 425 ntBASIC1.72□□□□□ -2.13
RETP07949 AC008267.5-201ENST00000424928 265 ntBASIC1.72□□□□□ -2.13
RETP07949 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.72□□□□□ -2.13
RETP07949 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.72□□□□□ -2.13
RETP07949 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.72□□□□□ -2.13
RETP07949 MTND1P1-201ENST00000445453 368 ntBASIC1.72□□□□□ -2.13
RETP07949 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.72□□□□□ -2.13
RETP07949 AC027575.1-201ENST00000481064 460 ntBASIC1.72□□□□□ -2.13
RETP07949 AL163973.1-201ENST00000484753 577 ntBASIC1.72□□□□□ -2.13
RETP07949 HMGB1P30-201ENST00000492455 606 ntBASIC1.72□□□□□ -2.13
RETP07949 Y_RNA.655-201ENST00000515919 96 ntBASIC1.72□□□□□ -2.13
RETP07949 AP005435.4-201ENST00000529514 284 ntBASIC1.72□□□□□ -2.13
RETP07949 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.72□□□□□ -2.13
RETP07949 MIR4452-201ENST00000583004 71 ntBASIC1.72□□□□□ -2.13
RETP07949 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.72□□□□□ -2.13
RETP07949 AP001330.5-201ENST00000607176 411 ntBASIC1.72□□□□□ -2.13
RETP07949 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.72□□□□□ -2.13
RETP07949 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.72□□□□□ -2.13
RETP07949 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
RETP07949 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
RETP07949 AC138393.1-203ENST00000327086 343 ntBASIC1.71□□□□□ -2.14
RETP07949 Y_RNA.41-201ENST00000362646 102 ntBASIC1.71□□□□□ -2.14
RETP07949 Y_RNA.112-201ENST00000363250 102 ntBASIC1.71□□□□□ -2.14
RETP07949 SNORD48-201ENST00000364953 64 ntBASIC1.71□□□□□ -2.14
RETP07949 RNU6-715P-201ENST00000365204 103 ntBASIC1.71□□□□□ -2.14
RETP07949 RNU6-996P-201ENST00000365438 107 ntBASIC1.71□□□□□ -2.14
RETP07949 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
RETP07949 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
RETP07949 Y_RNA.409-201ENST00000383990 98 ntBASIC1.71□□□□□ -2.14
RETP07949 RNU6-517P-201ENST00000384362 110 ntBASIC1.71□□□□□ -2.14
RETP07949 Y_RNA.481-201ENST00000384373 102 ntBASIC1.71□□□□□ -2.14
RETP07949 RNU6-45P-201ENST00000384471 107 ntBASIC1.71□□□□□ -2.14
RETP07949 SNORD116-20-201ENST00000384529 92 ntBASIC1.71□□□□□ -2.14
RETP07949 MTCYBP8-201ENST00000422855 651 ntBASIC1.71□□□□□ -2.14
RETP07949 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.71□□□□□ -2.14
RETP07949 TIMM9P3-201ENST00000428659 274 ntBASIC1.71□□□□□ -2.14
RETP07949 AL606489.2-201ENST00000433886 234 ntBASIC1.71□□□□□ -2.14
RETP07949 AL161788.1-201ENST00000441805 169 ntBASIC1.71□□□□□ -2.14
RETP07949 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.71□□□□□ -2.14
RETP07949 AC073415.1-201ENST00000449240 153 ntBASIC1.71□□□□□ -2.14
RETP07949 SNRPFP3-201ENST00000457792 225 ntBASIC1.71□□□□□ -2.14
RETP07949 TPTE2P5-203ENST00000458118 728 ntBASIC1.71□□□□□ -2.14
RETP07949 SRRM1P2-201ENST00000464531 1192 ntBASIC1.71□□□□□ -2.14
RETP07949 AC018868.1-201ENST00000491307 315 ntBASIC1.71□□□□□ -2.14
RETP07949 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.71□□□□□ -2.14
RETP07949 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.71□□□□□ -2.14
RETP07949 MTND3P25-201ENST00000509243 135 ntBASIC1.71□□□□□ -2.14
RETP07949 LRRC34P2-201ENST00000514850 553 ntBASIC1.71□□□□□ -2.14
RETP07949 RNA5SP220-201ENST00000516298 104 ntBASIC1.71□□□□□ -2.14
RETP07949 RNU6-1178P-201ENST00000516674 107 ntBASIC1.71□□□□□ -2.14
RETP07949 AP001893.2-201ENST00000526949 202 ntBASIC1.71□□□□□ -2.14
RETP07949 AC104383.1-201ENST00000530297 370 ntBASIC1.71□□□□□ -2.14
RETP07949 CBX3P4-201ENST00000538909 354 ntBASIC1.71□□□□□ -2.14
RETP07949 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.71□□□□□ -2.14
RETP07949 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.71□□□□□ -2.14
RETP07949 MIR4419B-201ENST00000577260 68 ntBASIC1.71□□□□□ -2.14
RETP07949 SNORD53B-201ENST00000577887 78 ntBASIC1.71□□□□□ -2.14
RETP07949 MIR3618-201ENST00000580330 88 ntBASIC1.71□□□□□ -2.14
RETP07949 AC073539.2-201ENST00000597113 165 ntBASIC1.71□□□□□ -2.14
RETP07949 RPL30P11-203ENST00000598995 310 ntBASIC1.71□□□□□ -2.14
RETP07949 AL773524.1-201ENST00000614065 229 ntBASIC1.71□□□□□ -2.14
RETP07949 AL354950.2-201ENST00000617939 290 ntBASIC1.71□□□□□ -2.14
RETP07949 AL359880.1-201ENST00000621879 266 ntBASIC1.71□□□□□ -2.14
RETP07949 AC139792.2-201ENST00000624218 587 ntBASIC1.71□□□□□ -2.14
RETP07949 AC099654.12-201ENST00000639868 649 ntBASIC1.71□□□□□ -2.14
RETP07949 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
RETP07949 MTND4P14-201ENST00000435799 1354 ntBASIC1.71□□□□□ -2.14
RETP07949 RNU6-552P-201ENST00000362869 119 ntBASIC1.7□□□□□ -2.14
RETP07949 SNORD114-19-201ENST00000363072 75 ntBASIC1.7□□□□□ -2.14
RETP07949 RNU6-1085P-201ENST00000363576 107 ntBASIC1.7□□□□□ -2.14
RETP07949 Y_RNA.255-201ENST00000364581 97 ntBASIC1.7□□□□□ -2.14
RETP07949 Y_RNA.381-201ENST00000365666 102 ntBASIC1.7□□□□□ -2.14
RETP07949 MIR613-201ENST00000385248 95 ntBASIC1.7□□□□□ -2.14
RETP07949 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
RETP07949 RPL21P1-201ENST00000399532 476 ntBASIC1.7□□□□□ -2.14
RETP07949 AC096920.1-201ENST00000423991 241 ntBASIC1.7□□□□□ -2.14
RETP07949 AL669831.1-202ENST00000428504 417 ntBASIC1.7□□□□□ -2.14
RETP07949 AL645568.3-201ENST00000433683 316 ntBASIC1.7□□□□□ -2.14
RETP07949 GTF2IP13-201ENST00000438487 386 ntBASIC1.7□□□□□ -2.14
RETP07949 AC009238.1-201ENST00000442165 424 ntBASIC1.7□□□□□ -2.14
RETP07949 AC009237.6-201ENST00000446969 424 ntBASIC1.7□□□□□ -2.14
RETP07949 AC012308.1-201ENST00000451232 178 ntBASIC1.7□□□□□ -2.14
RETP07949 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms