Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 COX6CP10-201ENST00000416832 224 ntBASIC3.4□□□□□ -1.87
CNOT4O95628 AC002075.2-201ENST00000425207 252 ntBASIC3.4□□□□□ -1.87
CNOT4O95628 RPS15AP5-201ENST00000436276 388 ntBASIC3.4□□□□□ -1.87
CNOT4O95628 RPL23AP58-201ENST00000440453 469 ntBASIC3.4□□□□□ -1.87
CNOT4O95628 AC096638.1-201ENST00000444678 216 ntBASIC3.4□□□□□ -1.87
CNOT4O95628 RPL23AP14-201ENST00000468281 468 ntBASIC3.4□□□□□ -1.87
CNOT4O95628 RPS27AP10-201ENST00000496103 208 ntBASIC3.4□□□□□ -1.87
CNOT4O95628 BTF3L4P4-201ENST00000506381 449 ntBASIC3.4□□□□□ -1.87
CNOT4O95628 RNU1-95P-201ENST00000516357 160 ntBASIC3.4□□□□□ -1.87
CNOT4O95628 Y_RNA.683-201ENST00000516508 93 ntBASIC3.4□□□□□ -1.87
CNOT4O95628 SCARNA13-201ENST00000516672 275 ntBASIC3.4□□□□□ -1.87
CNOT4O95628 RNU1-128P-201ENST00000516704 160 ntBASIC3.4□□□□□ -1.87
CNOT4O95628 AK6P2-201ENST00000549020 471 ntBASIC3.4□□□□□ -1.87
CNOT4O95628 AC025281.1-201ENST00000567026 265 ntBASIC3.4□□□□□ -1.87
CNOT4O95628 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.4□□□□□ -1.87
CNOT4O95628 AC008739.2-201ENST00000597006 317 ntBASIC3.4□□□□□ -1.87
CNOT4O95628 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.4□□□□□ -1.87
CNOT4O95628 AC096577.2-201ENST00000611455 153 ntBASIC3.4□□□□□ -1.87
CNOT4O95628 AC024581.2-201ENST00000619986 252 ntBASIC3.4□□□□□ -1.87
CNOT4O95628 U2.21-201ENST00000637295 81 ntBASIC3.4□□□□□ -1.87
CNOT4O95628 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CNOT4O95628 SRP72P2-201ENST00000344851 1979 ntBASIC3.4□□□□□ -1.87
CNOT4O95628 ADAM3A-203ENST00000461344 2157 ntBASIC3.39□□□□□ -1.87
CNOT4O95628 RNA5SP322-201ENST00000363617 119 ntBASIC3.39□□□□□ -1.87
CNOT4O95628 RNU6-740P-201ENST00000364734 105 ntBASIC3.39□□□□□ -1.87
CNOT4O95628 RNY4P28-201ENST00000365281 93 ntBASIC3.39□□□□□ -1.87
CNOT4O95628 RNU6-142P-201ENST00000384019 107 ntBASIC3.39□□□□□ -1.87
CNOT4O95628 SNORA29-201ENST00000384183 140 ntBASIC3.39□□□□□ -1.87
CNOT4O95628 Y_RNA.506-201ENST00000384494 102 ntBASIC3.39□□□□□ -1.87
CNOT4O95628 RNU6-125P-201ENST00000384505 107 ntBASIC3.39□□□□□ -1.87
CNOT4O95628 RNU6-21P-201ENST00000384710 107 ntBASIC3.39□□□□□ -1.87
CNOT4O95628 MIR34B-201ENST00000385076 84 ntBASIC3.39□□□□□ -1.87
CNOT4O95628 RNU6-493P-201ENST00000391321 108 ntBASIC3.39□□□□□ -1.87
CNOT4O95628 AL591419.1-201ENST00000427423 339 ntBASIC3.39□□□□□ -1.87
CNOT4O95628 AC098831.1-201ENST00000440661 216 ntBASIC3.39□□□□□ -1.87
CNOT4O95628 AC073901.1-201ENST00000462471 408 ntBASIC3.39□□□□□ -1.87
CNOT4O95628 RN7SKP49-201ENST00000516675 260 ntBASIC3.39□□□□□ -1.87
CNOT4O95628 RN7SKP282-201ENST00000516824 299 ntBASIC3.39□□□□□ -1.87
CNOT4O95628 SNORA70.24-201ENST00000517233 118 ntBASIC3.39□□□□□ -1.87
CNOT4O95628 AC016256.1-201ENST00000547971 354 ntBASIC3.39□□□□□ -1.87
CNOT4O95628 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.39□□□□□ -1.87
CNOT4O95628 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.39□□□□□ -1.87
CNOT4O95628 MIR4423-201ENST00000580922 80 ntBASIC3.39□□□□□ -1.87
CNOT4O95628 MIR5187-201ENST00000583479 76 ntBASIC3.39□□□□□ -1.87
CNOT4O95628 AC020895.1-201ENST00000595362 272 ntBASIC3.39□□□□□ -1.87
CNOT4O95628 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.39□□□□□ -1.87
CNOT4O95628 UCA1.1-201ENST00000620952 75 ntBASIC3.39□□□□□ -1.87
CNOT4O95628 AC092435.3-201ENST00000565538 3654 ntBASIC3.39□□□□□ -1.87
CNOT4O95628 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CNOT4O95628 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CNOT4O95628 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.39□□□□□ -1.87
CNOT4O95628 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
CNOT4O95628 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CNOT4O95628 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.38□□□□□ -1.87
CNOT4O95628 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CNOT4O95628 AC110491.1-201ENST00000562191 2010 ntBASIC3.38□□□□□ -1.87
CNOT4O95628 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CNOT4O95628 SNORA25.1-201ENST00000362326 128 ntBASIC3.38□□□□□ -1.87
CNOT4O95628 RNU6-778P-201ENST00000363269 103 ntBASIC3.38□□□□□ -1.87
CNOT4O95628 RNU6-1020P-201ENST00000363684 107 ntBASIC3.38□□□□□ -1.87
CNOT4O95628 SNORD32A-201ENST00000364805 84 ntBASIC3.38□□□□□ -1.87
CNOT4O95628 Y_RNA.319-201ENST00000365138 92 ntBASIC3.38□□□□□ -1.87
CNOT4O95628 SNORA5A-201ENST00000384111 134 ntBASIC3.38□□□□□ -1.87
CNOT4O95628 SNORD116-20-201ENST00000384529 92 ntBASIC3.38□□□□□ -1.87
CNOT4O95628 Y_RNA.569-201ENST00000384749 103 ntBASIC3.38□□□□□ -1.87
CNOT4O95628 BPY2DP-201ENST00000422208 265 ntBASIC3.38□□□□□ -1.87
CNOT4O95628 AL139247.1-201ENST00000422768 325 ntBASIC3.38□□□□□ -1.87
CNOT4O95628 RPL23AP95-201ENST00000426806 265 ntBASIC3.38□□□□□ -1.87
CNOT4O95628 AL365496.1-201ENST00000426885 215 ntBASIC3.38□□□□□ -1.87
CNOT4O95628 AC005300.1-201ENST00000428401 373 ntBASIC3.38□□□□□ -1.87
CNOT4O95628 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.38□□□□□ -1.87
CNOT4O95628 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.38□□□□□ -1.87
CNOT4O95628 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.38□□□□□ -1.87
CNOT4O95628 RPL26P26-201ENST00000480251 434 ntBASIC3.38□□□□□ -1.87
CNOT4O95628 MRPL42P6-201ENST00000486397 371 ntBASIC3.38□□□□□ -1.87
CNOT4O95628 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.38□□□□□ -1.87
CNOT4O95628 SNORD116-28-201ENST00000516123 91 ntBASIC3.38□□□□□ -1.87
CNOT4O95628 RNU6-861P-201ENST00000516745 106 ntBASIC3.38□□□□□ -1.87
CNOT4O95628 RNU7-110P-201ENST00000516891 62 ntBASIC3.38□□□□□ -1.87
CNOT4O95628 AC027288.2-201ENST00000553028 243 ntBASIC3.38□□□□□ -1.87
CNOT4O95628 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.38□□□□□ -1.87
CNOT4O95628 AL356157.2-201ENST00000605122 111 ntBASIC3.38□□□□□ -1.87
CNOT4O95628 AC004832.5-201ENST00000608677 401 ntBASIC3.38□□□□□ -1.87
CNOT4O95628 AC005296.1-201ENST00000616145 209 ntBASIC3.38□□□□□ -1.87
CNOT4O95628 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CNOT4O95628 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CNOT4O95628 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
CNOT4O95628 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CNOT4O95628 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CNOT4O95628 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.37□□□□□ -1.87
CNOT4O95628 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.37□□□□□ -1.87
CNOT4O95628 RNU5B-2P-201ENST00000363036 113 ntBASIC3.37□□□□□ -1.87
CNOT4O95628 Y_RNA.122-201ENST00000363331 96 ntBASIC3.37□□□□□ -1.87
CNOT4O95628 Y_RNA.292-201ENST00000364904 97 ntBASIC3.37□□□□□ -1.87
CNOT4O95628 RNU6-514P-201ENST00000384208 107 ntBASIC3.37□□□□□ -1.87
CNOT4O95628 SNORA11.2-201ENST00000408318 127 ntBASIC3.37□□□□□ -1.87
CNOT4O95628 RNU6-1140P-201ENST00000410517 106 ntBASIC3.37□□□□□ -1.87
CNOT4O95628 RNU2-49P-201ENST00000410666 184 ntBASIC3.37□□□□□ -1.87
CNOT4O95628 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.37□□□□□ -1.87
CNOT4O95628 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 145.1 ms