Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CTNND1O60716 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.18□□□□□ -1.9
CTNND1O60716 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CTNND1O60716 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CTNND1O60716 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.17□□□□□ -1.9
CTNND1O60716 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CTNND1O60716 Y_RNA.40-201ENST00000362645 93 ntBASIC3.17□□□□□ -1.9
CTNND1O60716 SNORD50.1-201ENST00000362987 71 ntBASIC3.17□□□□□ -1.9
CTNND1O60716 Y_RNA.259-201ENST00000364619 101 ntBASIC3.17□□□□□ -1.9
CTNND1O60716 U3.13-201ENST00000364804 214 ntBASIC3.17□□□□□ -1.9
CTNND1O60716 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CTNND1O60716 RNU6-1304P-201ENST00000411374 106 ntBASIC3.17□□□□□ -1.9
CTNND1O60716 EIF4EP4-201ENST00000424916 578 ntBASIC3.17□□□□□ -1.9
CTNND1O60716 AC112220.1-201ENST00000434628 355 ntBASIC3.17□□□□□ -1.9
CTNND1O60716 RPS15AP7-201ENST00000439294 405 ntBASIC3.17□□□□□ -1.9
CTNND1O60716 Z96811.1-201ENST00000445880 108 ntBASIC3.17□□□□□ -1.9
CTNND1O60716 AC090525.1-201ENST00000479116 478 ntBASIC3.17□□□□□ -1.9
CTNND1O60716 RPL7P42-201ENST00000481005 679 ntBASIC3.17□□□□□ -1.9
CTNND1O60716 AIG1P1-201ENST00000503376 148 ntBASIC3.17□□□□□ -1.9
CTNND1O60716 AC022447.4-201ENST00000504053 364 ntBASIC3.17□□□□□ -1.9
CTNND1O60716 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.17□□□□□ -1.9
CTNND1O60716 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.17□□□□□ -1.9
CTNND1O60716 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.17□□□□□ -1.9
CTNND1O60716 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.17□□□□□ -1.9
CTNND1O60716 AP002770.2-201ENST00000543613 532 ntBASIC3.17□□□□□ -1.9
CTNND1O60716 AL590808.1-201ENST00000618696 141 ntBASIC3.17□□□□□ -1.9
CTNND1O60716 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.17□□□□□ -1.9
CTNND1O60716 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.16□□□□□ -1.9
CTNND1O60716 MTND5P9-201ENST00000503854 1755 ntBASIC3.16□□□□□ -1.9
CTNND1O60716 AC092268.1-201ENST00000342691 405 ntBASIC3.16□□□□□ -1.9
CTNND1O60716 Y_RNA.404-201ENST00000383978 102 ntBASIC3.16□□□□□ -1.9
CTNND1O60716 Y_RNA.504-201ENST00000384481 104 ntBASIC3.16□□□□□ -1.9
CTNND1O60716 SNORD116-29-201ENST00000384516 83 ntBASIC3.16□□□□□ -1.9
CTNND1O60716 MIR218-1-201ENST00000384999 110 ntBASIC3.16□□□□□ -1.9
CTNND1O60716 RNY4P36-201ENST00000391116 96 ntBASIC3.16□□□□□ -1.9
CTNND1O60716 U6atac.2-201ENST00000408644 118 ntBASIC3.16□□□□□ -1.9
CTNND1O60716 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.16□□□□□ -1.9
CTNND1O60716 AIMP1P2-201ENST00000425294 312 ntBASIC3.16□□□□□ -1.9
CTNND1O60716 USMG5P1-201ENST00000425964 177 ntBASIC3.16□□□□□ -1.9
CTNND1O60716 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.16□□□□□ -1.9
CTNND1O60716 Y_RNA.653-201ENST00000459091 95 ntBASIC3.16□□□□□ -1.9
CTNND1O60716 AC003982.1-202ENST00000469928 248 ntBASIC3.16□□□□□ -1.9
CTNND1O60716 TRBV12-1-201ENST00000479785 344 ntBASIC3.16□□□□□ -1.9
CTNND1O60716 FO393415.2-201ENST00000480085 343 ntBASIC3.16□□□□□ -1.9
CTNND1O60716 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.16□□□□□ -1.9
CTNND1O60716 AC097473.1-201ENST00000508142 408 ntBASIC3.16□□□□□ -1.9
CTNND1O60716 RNU2-53P-201ENST00000516257 147 ntBASIC3.16□□□□□ -1.9
CTNND1O60716 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.16□□□□□ -1.9
CTNND1O60716 AC027176.1-201ENST00000560204 514 ntBASIC3.16□□□□□ -1.9
CTNND1O60716 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.16□□□□□ -1.9
CTNND1O60716 MIR5696-201ENST00000578474 85 ntBASIC3.16□□□□□ -1.9
CTNND1O60716 MIR3199-1-201ENST00000582434 88 ntBASIC3.16□□□□□ -1.9
CTNND1O60716 AC005899.2-201ENST00000584353 90 ntBASIC3.16□□□□□ -1.9
CTNND1O60716 AC069234.5-201ENST00000611056 416 ntBASIC3.16□□□□□ -1.9
CTNND1O60716 AC084781.2-201ENST00000615568 161 ntBASIC3.16□□□□□ -1.9
CTNND1O60716 AC126177.8-201ENST00000618339 1015 ntBASIC3.16□□□□□ -1.9
CTNND1O60716 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CTNND1O60716 AC080128.1-201ENST00000474389 1917 ntBASIC3.16□□□□□ -1.9
CTNND1O60716 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.15□□□□□ -1.91
CTNND1O60716 RNU6-655P-201ENST00000362858 107 ntBASIC3.15□□□□□ -1.91
CTNND1O60716 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CTNND1O60716 AL078595.1-201ENST00000404458 226 ntBASIC3.15□□□□□ -1.91
CTNND1O60716 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.15□□□□□ -1.91
CTNND1O60716 AC008267.5-201ENST00000424928 265 ntBASIC3.15□□□□□ -1.91
CTNND1O60716 RPL30P4-201ENST00000429309 333 ntBASIC3.15□□□□□ -1.91
CTNND1O60716 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.15□□□□□ -1.91
CTNND1O60716 GPM6BP3-201ENST00000442797 145 ntBASIC3.15□□□□□ -1.91
CTNND1O60716 RPL30P15-201ENST00000457129 321 ntBASIC3.15□□□□□ -1.91
CTNND1O60716 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.15□□□□□ -1.91
CTNND1O60716 AL121594.1-201ENST00000475906 575 ntBASIC3.15□□□□□ -1.91
CTNND1O60716 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.15□□□□□ -1.91
CTNND1O60716 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.15□□□□□ -1.91
CTNND1O60716 AC005741.1-201ENST00000511094 432 ntBASIC3.15□□□□□ -1.91
CTNND1O60716 RNU5F-2P-201ENST00000516066 82 ntBASIC3.15□□□□□ -1.91
CTNND1O60716 RNU6-307P-201ENST00000516743 106 ntBASIC3.15□□□□□ -1.91
CTNND1O60716 RNU6-1213P-201ENST00000517075 94 ntBASIC3.15□□□□□ -1.91
CTNND1O60716 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.15□□□□□ -1.91
CTNND1O60716 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.15□□□□□ -1.91
CTNND1O60716 AC016256.1-201ENST00000547971 354 ntBASIC3.15□□□□□ -1.91
CTNND1O60716 AC009318.2-201ENST00000610917 651 ntBASIC3.15□□□□□ -1.91
CTNND1O60716 AL359198.2-201ENST00000611836 194 ntBASIC3.15□□□□□ -1.91
CTNND1O60716 AC133104.2-201ENST00000615272 193 ntBASIC3.15□□□□□ -1.91
CTNND1O60716 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.15□□□□□ -1.91
CTNND1O60716 SNORA43.4-201ENST00000629559 138 ntBASIC3.15□□□□□ -1.91
CTNND1O60716 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.15□□□□□ -1.91
CTNND1O60716 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.15□□□□□ -1.91
CTNND1O60716 AC026241.1-201ENST00000517873 2142 ntBASIC3.14□□□□□ -1.91
CTNND1O60716 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CTNND1O60716 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CTNND1O60716 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CTNND1O60716 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CTNND1O60716 RNU6-1210P-201ENST00000363775 107 ntBASIC3.14□□□□□ -1.91
CTNND1O60716 Y_RNA.535-201ENST00000384612 99 ntBASIC3.14□□□□□ -1.91
CTNND1O60716 RNU6-310P-201ENST00000384655 107 ntBASIC3.14□□□□□ -1.91
CTNND1O60716 RNU6-331P-201ENST00000384724 107 ntBASIC3.14□□□□□ -1.91
CTNND1O60716 MIR181B1-201ENST00000385240 110 ntBASIC3.14□□□□□ -1.91
CTNND1O60716 Y_RNA.646-201ENST00000410980 101 ntBASIC3.14□□□□□ -1.91
CTNND1O60716 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.14□□□□□ -1.91
CTNND1O60716 AL513124.1-201ENST00000450410 614 ntBASIC3.14□□□□□ -1.91
CTNND1O60716 AC079354.2-201ENST00000453523 154 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms