Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 HMGB1P35-201ENST00000503360 598 ntBASIC1.93□□□□□ -2.1
LCMT2O60294 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.93□□□□□ -2.1
LCMT2O60294 AC091885.1-201ENST00000506658 268 ntBASIC1.93□□□□□ -2.1
LCMT2O60294 AK3P2-201ENST00000507976 429 ntBASIC1.93□□□□□ -2.1
LCMT2O60294 RPL39P5-202ENST00000512505 151 ntBASIC1.93□□□□□ -2.1
LCMT2O60294 SNORD60.2-201ENST00000516883 86 ntBASIC1.93□□□□□ -2.1
LCMT2O60294 AP005597.4-201ENST00000526762 229 ntBASIC1.93□□□□□ -2.1
LCMT2O60294 AC026271.5-201ENST00000577873 130 ntBASIC1.93□□□□□ -2.1
LCMT2O60294 MIR5692C1-201ENST00000585309 91 ntBASIC1.93□□□□□ -2.1
LCMT2O60294 ELOCP5-201ENST00000604924 333 ntBASIC1.93□□□□□ -2.1
LCMT2O60294 AC004492.1-201ENST00000607036 742 ntBASIC1.93□□□□□ -2.1
LCMT2O60294 DISC2.1-201ENST00000612827 205 ntBASIC1.93□□□□□ -2.1
LCMT2O60294 SDR42E1P4-201ENST00000620894 481 ntBASIC1.93□□□□□ -2.1
LCMT2O60294 uc_338.20-201ENST00000621563 178 ntBASIC1.93□□□□□ -2.1
LCMT2O60294 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.93□□□□□ -2.1
LCMT2O60294 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.93□□□□□ -2.1
LCMT2O60294 MIR548F1-201ENST00000408667 84 ntBASIC1.92□□□□□ -2.1
LCMT2O60294 AC096920.1-201ENST00000423991 241 ntBASIC1.92□□□□□ -2.1
LCMT2O60294 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LCMT2O60294 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.92□□□□□ -2.1
LCMT2O60294 RNU6-717P-201ENST00000459076 104 ntBASIC1.92□□□□□ -2.1
LCMT2O60294 RNU7-138P-201ENST00000459479 64 ntBASIC1.92□□□□□ -2.1
LCMT2O60294 AC025033.1-201ENST00000463883 194 ntBASIC1.92□□□□□ -2.1
LCMT2O60294 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.92□□□□□ -2.1
LCMT2O60294 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.92□□□□□ -2.1
LCMT2O60294 RPL38P4-201ENST00000502376 214 ntBASIC1.92□□□□□ -2.1
LCMT2O60294 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.92□□□□□ -2.1
LCMT2O60294 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.92□□□□□ -2.1
LCMT2O60294 AC079140.5-201ENST00000507882 310 ntBASIC1.92□□□□□ -2.1
LCMT2O60294 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.92□□□□□ -2.1
LCMT2O60294 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.92□□□□□ -2.1
LCMT2O60294 RNU6-323P-201ENST00000521915 107 ntBASIC1.92□□□□□ -2.1
LCMT2O60294 MTND1P35-201ENST00000526739 508 ntBASIC1.92□□□□□ -2.1
LCMT2O60294 IMMP1LP2-201ENST00000552954 492 ntBASIC1.92□□□□□ -2.1
LCMT2O60294 MIR3124-201ENST00000582636 67 ntBASIC1.92□□□□□ -2.1
LCMT2O60294 AC091135.1-201ENST00000585943 307 ntBASIC1.92□□□□□ -2.1
LCMT2O60294 AC104984.5-201ENST00000586878 94 ntBASIC1.92□□□□□ -2.1
LCMT2O60294 BNIP3P25-201ENST00000596023 559 ntBASIC1.92□□□□□ -2.1
LCMT2O60294 AL357078.3-201ENST00000607528 618 ntBASIC1.92□□□□□ -2.1
LCMT2O60294 AC064836.2-201ENST00000609491 462 ntBASIC1.92□□□□□ -2.1
LCMT2O60294 MIR6715A-201ENST00000615929 79 ntBASIC1.92□□□□□ -2.1
LCMT2O60294 AC007792.1-201ENST00000623023 402 ntBASIC1.92□□□□□ -2.1
LCMT2O60294 AC090517.3-201ENST00000625170 141 ntBASIC1.92□□□□□ -2.1
LCMT2O60294 AC024614.3-201ENST00000637860 256 ntBASIC1.92□□□□□ -2.1
LCMT2O60294 AC002543.1-201ENST00000299783 1954 ntBASIC1.92□□□□□ -2.1
LCMT2O60294 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
LCMT2O60294 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.92□□□□□ -2.1
LCMT2O60294 snoU2_19.1-201ENST00000362361 80 ntBASIC1.91□□□□□ -2.1
LCMT2O60294 RNU6-1285P-201ENST00000363480 105 ntBASIC1.91□□□□□ -2.1
LCMT2O60294 RNY4P14-201ENST00000363656 96 ntBASIC1.91□□□□□ -2.1
LCMT2O60294 RNU6-1210P-201ENST00000363775 107 ntBASIC1.91□□□□□ -2.1
LCMT2O60294 Y_RNA.256-201ENST00000364594 104 ntBASIC1.91□□□□□ -2.1
LCMT2O60294 Y_RNA.402-201ENST00000383972 102 ntBASIC1.91□□□□□ -2.1
LCMT2O60294 RNU6-1274P-201ENST00000384557 107 ntBASIC1.91□□□□□ -2.1
LCMT2O60294 RNU6-1222P-201ENST00000384615 107 ntBASIC1.91□□□□□ -2.1
LCMT2O60294 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
LCMT2O60294 CBX3P9-201ENST00000402326 552 ntBASIC1.91□□□□□ -2.1
LCMT2O60294 AL512604.1-201ENST00000404812 257 ntBASIC1.91□□□□□ -2.1
LCMT2O60294 RNU4-26P-201ENST00000410270 107 ntBASIC1.91□□□□□ -2.1
LCMT2O60294 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.91□□□□□ -2.1
LCMT2O60294 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.91□□□□□ -2.1
LCMT2O60294 MRPS10P2-201ENST00000431226 381 ntBASIC1.91□□□□□ -2.1
LCMT2O60294 ERLEC1P1-201ENST00000433806 578 ntBASIC1.91□□□□□ -2.1
LCMT2O60294 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.91□□□□□ -2.1
LCMT2O60294 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.91□□□□□ -2.1
LCMT2O60294 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.91□□□□□ -2.1
LCMT2O60294 SNRPGP7-201ENST00000469016 106 ntBASIC1.91□□□□□ -2.1
LCMT2O60294 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.91□□□□□ -2.1
LCMT2O60294 RPL30P1-201ENST00000488676 339 ntBASIC1.91□□□□□ -2.1
LCMT2O60294 YWHAEP4-201ENST00000505390 198 ntBASIC1.91□□□□□ -2.1
LCMT2O60294 Y_RNA.665-201ENST00000516177 98 ntBASIC1.91□□□□□ -2.1
LCMT2O60294 RNU1-40P-201ENST00000516816 164 ntBASIC1.91□□□□□ -2.1
LCMT2O60294 RNU1-97P-201ENST00000516872 164 ntBASIC1.91□□□□□ -2.1
LCMT2O60294 RNU6-667P-201ENST00000517186 102 ntBASIC1.91□□□□□ -2.1
LCMT2O60294 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.91□□□□□ -2.1
LCMT2O60294 AC109635.3-201ENST00000529536 185 ntBASIC1.91□□□□□ -2.1
LCMT2O60294 AC025423.5-201ENST00000550230 219 ntBASIC1.91□□□□□ -2.1
LCMT2O60294 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.91□□□□□ -2.1
LCMT2O60294 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.91□□□□□ -2.1
LCMT2O60294 BNIP3P16-201ENST00000589779 534 ntBASIC1.91□□□□□ -2.1
LCMT2O60294 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.91□□□□□ -2.1
LCMT2O60294 CTHRC1P1-201ENST00000605383 469 ntBASIC1.91□□□□□ -2.1
LCMT2O60294 AC104458.1-201ENST00000608243 463 ntBASIC1.91□□□□□ -2.1
LCMT2O60294 RMST_3.1-201ENST00000611651 109 ntBASIC1.91□□□□□ -2.1
LCMT2O60294 FAM157A-202ENST00000615155 405 ntBASIC1.91□□□□□ -2.1
LCMT2O60294 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.91□□□□□ -2.1
LCMT2O60294 CENPCP1-201ENST00000533085 2578 ntBASIC1.91□□□□□ -2.1
LCMT2O60294 SNORD32A-201ENST00000364805 84 ntBASIC1.9□□□□□ -2.11
LCMT2O60294 RNU4-12P-201ENST00000365233 139 ntBASIC1.9□□□□□ -2.11
LCMT2O60294 Y_RNA.450-201ENST00000384198 113 ntBASIC1.9□□□□□ -2.11
LCMT2O60294 RNU6-43P-201ENST00000384302 107 ntBASIC1.9□□□□□ -2.11
LCMT2O60294 MIR518A2-201ENST00000384966 87 ntBASIC1.9□□□□□ -2.11
LCMT2O60294 RNU6-1245P-201ENST00000411130 106 ntBASIC1.9□□□□□ -2.11
LCMT2O60294 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.9□□□□□ -2.11
LCMT2O60294 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.9□□□□□ -2.11
LCMT2O60294 SNAP23P1-201ENST00000433229 246 ntBASIC1.9□□□□□ -2.11
LCMT2O60294 AL137159.1-201ENST00000452808 512 ntBASIC1.9□□□□□ -2.11
LCMT2O60294 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.9□□□□□ -2.11
LCMT2O60294 AC091874.1-201ENST00000511402 339 ntBASIC1.9□□□□□ -2.11
LCMT2O60294 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms