Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 AL356280.1-201ENST00000603614 379 ntBASIC2.11□□□□□ -2.07
PHF1O43189 Y_RNA.804-201ENST00000615262 101 ntBASIC2.11□□□□□ -2.07
PHF1O43189 AC063943.3-201ENST00000615562 356 ntBASIC2.11□□□□□ -2.07
PHF1O43189 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.11□□□□□ -2.07
PHF1O43189 MIR3199-2-201ENST00000636243 86 ntBASIC2.11□□□□□ -2.07
PHF1O43189 MIR7515-201ENST00000637837 67 ntBASIC2.11□□□□□ -2.07
PHF1O43189 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PHF1O43189 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
PHF1O43189 RNU1-52P-201ENST00000384190 164 ntBASIC2.1□□□□□ -2.07
PHF1O43189 Y_RNA.509-201ENST00000384506 99 ntBASIC2.1□□□□□ -2.07
PHF1O43189 Y_RNA.529-201ENST00000384586 119 ntBASIC2.1□□□□□ -2.07
PHF1O43189 AL590632.1-201ENST00000424289 371 ntBASIC2.1□□□□□ -2.07
PHF1O43189 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PHF1O43189 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.1□□□□□ -2.07
PHF1O43189 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PHF1O43189 RNU7-26P-201ENST00000458980 63 ntBASIC2.1□□□□□ -2.07
PHF1O43189 AC130509.1-201ENST00000464158 433 ntBASIC2.1□□□□□ -2.07
PHF1O43189 MED28P2-201ENST00000475771 317 ntBASIC2.1□□□□□ -2.07
PHF1O43189 AP001025.1-201ENST00000486139 332 ntBASIC2.1□□□□□ -2.07
PHF1O43189 HMGB3P3-201ENST00000510526 400 ntBASIC2.1□□□□□ -2.07
PHF1O43189 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.1□□□□□ -2.07
PHF1O43189 Y_RNA.682-201ENST00000516457 100 ntBASIC2.1□□□□□ -2.07
PHF1O43189 ACA59.2-201ENST00000517061 156 ntBASIC2.1□□□□□ -2.07
PHF1O43189 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.1□□□□□ -2.07
PHF1O43189 IMMP1LP2-201ENST00000552954 492 ntBASIC2.1□□□□□ -2.07
PHF1O43189 TRAV32-201ENST00000553993 340 ntBASIC2.1□□□□□ -2.07
PHF1O43189 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.1□□□□□ -2.07
PHF1O43189 AL137847.3-201ENST00000611521 109 ntBASIC2.1□□□□□ -2.07
PHF1O43189 AC104237.2-201ENST00000612456 443 ntBASIC2.1□□□□□ -2.07
PHF1O43189 U4.3-201ENST00000621047 82 ntBASIC2.1□□□□□ -2.07
PHF1O43189 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
PHF1O43189 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
PHF1O43189 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
PHF1O43189 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
PHF1O43189 SNORD114-1-201ENST00000362705 72 ntBASIC2.09□□□□□ -2.07
PHF1O43189 RNU6-336P-201ENST00000364891 107 ntBASIC2.09□□□□□ -2.07
PHF1O43189 RNU6-1280P-201ENST00000365211 107 ntBASIC2.09□□□□□ -2.07
PHF1O43189 RNU6-827P-201ENST00000365553 106 ntBASIC2.09□□□□□ -2.07
PHF1O43189 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.09□□□□□ -2.07
PHF1O43189 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
PHF1O43189 RNU6-622P-201ENST00000384272 103 ntBASIC2.09□□□□□ -2.07
PHF1O43189 RNU6-843P-201ENST00000384454 104 ntBASIC2.09□□□□□ -2.07
PHF1O43189 RNU6-748P-201ENST00000384648 107 ntBASIC2.09□□□□□ -2.07
PHF1O43189 MIR144-201ENST00000384886 86 ntBASIC2.09□□□□□ -2.07
PHF1O43189 MIR548F5-201ENST00000408421 86 ntBASIC2.09□□□□□ -2.07
PHF1O43189 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.09□□□□□ -2.07
PHF1O43189 FABP5P14-201ENST00000437273 393 ntBASIC2.09□□□□□ -2.07
PHF1O43189 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
PHF1O43189 AC007969.2-201ENST00000441891 191 ntBASIC2.09□□□□□ -2.07
PHF1O43189 AC093019.1-201ENST00000443135 252 ntBASIC2.09□□□□□ -2.07
PHF1O43189 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.09□□□□□ -2.07
PHF1O43189 RNA5SP402-201ENST00000517148 110 ntBASIC2.09□□□□□ -2.07
PHF1O43189 SNORA31.23-201ENST00000517219 133 ntBASIC2.09□□□□□ -2.07
PHF1O43189 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.09□□□□□ -2.07
PHF1O43189 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.09□□□□□ -2.07
PHF1O43189 AC023824.2-201ENST00000566185 400 ntBASIC2.09□□□□□ -2.07
PHF1O43189 AC005668.1-201ENST00000571142 476 ntBASIC2.09□□□□□ -2.07
PHF1O43189 AC007151.1-201ENST00000572774 483 ntBASIC2.09□□□□□ -2.07
PHF1O43189 MIR4790-201ENST00000577799 79 ntBASIC2.09□□□□□ -2.07
PHF1O43189 BNIP3P16-201ENST00000589779 534 ntBASIC2.09□□□□□ -2.07
PHF1O43189 AL121917.1-203ENST00000605534 577 ntBASIC2.09□□□□□ -2.07
PHF1O43189 RNU6-91P-201ENST00000607774 107 ntBASIC2.09□□□□□ -2.07
PHF1O43189 AL133215.3-201ENST00000609801 448 ntBASIC2.09□□□□□ -2.07
PHF1O43189 AC011890.2-201ENST00000613393 294 ntBASIC2.09□□□□□ -2.07
PHF1O43189 AC112487.2-201ENST00000637950 304 ntBASIC2.09□□□□□ -2.07
PHF1O43189 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
PHF1O43189 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
PHF1O43189 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
PHF1O43189 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
PHF1O43189 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
PHF1O43189 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.08□□□□□ -2.08
PHF1O43189 Y_RNA.226-201ENST00000364337 114 ntBASIC2.08□□□□□ -2.08
PHF1O43189 RNU6-593P-201ENST00000364716 112 ntBASIC2.08□□□□□ -2.08
PHF1O43189 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
PHF1O43189 AL030996.1-201ENST00000411430 235 ntBASIC2.08□□□□□ -2.08
PHF1O43189 AC074085.1-201ENST00000413598 418 ntBASIC2.08□□□□□ -2.08
PHF1O43189 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.08□□□□□ -2.08
PHF1O43189 AL139396.1-201ENST00000421137 167 ntBASIC2.08□□□□□ -2.08
PHF1O43189 PTGES3P4-201ENST00000426243 356 ntBASIC2.08□□□□□ -2.08
PHF1O43189 RNU7-187P-201ENST00000458985 68 ntBASIC2.08□□□□□ -2.08
PHF1O43189 RNU6-1037P-201ENST00000459571 107 ntBASIC2.08□□□□□ -2.08
PHF1O43189 RN7SL636P-201ENST00000497504 294 ntBASIC2.08□□□□□ -2.08
PHF1O43189 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.08□□□□□ -2.08
PHF1O43189 PTP4A1P4-201ENST00000512479 322 ntBASIC2.08□□□□□ -2.08
PHF1O43189 RNU5B-3P-201ENST00000516601 115 ntBASIC2.08□□□□□ -2.08
PHF1O43189 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.08□□□□□ -2.08
PHF1O43189 AC104576.1-201ENST00000524225 88 ntBASIC2.08□□□□□ -2.08
PHF1O43189 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.08□□□□□ -2.08
PHF1O43189 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.08□□□□□ -2.08
PHF1O43189 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.08□□□□□ -2.08
PHF1O43189 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.08□□□□□ -2.08
PHF1O43189 MTND4P23-201ENST00000447723 1363 ntBASIC2.08□□□□□ -2.08
PHF1O43189 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.07□□□□□ -2.08
PHF1O43189 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
PHF1O43189 Y_RNA.61-201ENST00000362835 102 ntBASIC2.07□□□□□ -2.08
PHF1O43189 RNU6-428P-201ENST00000362942 107 ntBASIC2.07□□□□□ -2.08
PHF1O43189 RNU6-797P-201ENST00000363101 109 ntBASIC2.07□□□□□ -2.08
PHF1O43189 RNU4-73P-201ENST00000363164 141 ntBASIC2.07□□□□□ -2.08
PHF1O43189 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
PHF1O43189 SNORD116-20-201ENST00000384529 92 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms