Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CLDN3O15551 RN7SKP101-201ENST00000411376 320 ntBASIC1.76□□□□□ -2.13
CLDN3O15551 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.76□□□□□ -2.13
CLDN3O15551 RPS6P15-201ENST00000431996 751 ntBASIC1.76□□□□□ -2.13
CLDN3O15551 AL035666.1-201ENST00000446195 348 ntBASIC1.76□□□□□ -2.13
CLDN3O15551 GMFBP1-201ENST00000467831 427 ntBASIC1.76□□□□□ -2.13
CLDN3O15551 AC132942.1-201ENST00000486753 483 ntBASIC1.76□□□□□ -2.13
CLDN3O15551 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.76□□□□□ -2.13
CLDN3O15551 SNORA31.16-201ENST00000516773 139 ntBASIC1.76□□□□□ -2.13
CLDN3O15551 AC022880.1-201ENST00000534017 973 ntBASIC1.76□□□□□ -2.13
CLDN3O15551 AC103996.1-201ENST00000555468 102 ntBASIC1.76□□□□□ -2.13
CLDN3O15551 AC109446.1-201ENST00000566172 220 ntBASIC1.76□□□□□ -2.13
CLDN3O15551 AC022254.1-201ENST00000567857 235 ntBASIC1.76□□□□□ -2.13
CLDN3O15551 AC063944.3-201ENST00000609969 533 ntBASIC1.76□□□□□ -2.13
CLDN3O15551 ZNF72P-201ENST00000425869 1908 ntBASIC1.76□□□□□ -2.13
CLDN3O15551 CBX3P1-201ENST00000325243 554 ntBASIC1.75□□□□□ -2.13
CLDN3O15551 RNU6-234P-201ENST00000365229 104 ntBASIC1.75□□□□□ -2.13
CLDN3O15551 RNU6-26P-201ENST00000383985 107 ntBASIC1.75□□□□□ -2.13
CLDN3O15551 RNU2-29P-201ENST00000410423 189 ntBASIC1.75□□□□□ -2.13
CLDN3O15551 RN7SKP142-201ENST00000411236 328 ntBASIC1.75□□□□□ -2.13
CLDN3O15551 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.75□□□□□ -2.13
CLDN3O15551 HMGN2P18-201ENST00000450680 270 ntBASIC1.75□□□□□ -2.13
CLDN3O15551 SNRPFP3-201ENST00000457792 225 ntBASIC1.75□□□□□ -2.13
CLDN3O15551 RNU6-333P-201ENST00000459117 107 ntBASIC1.75□□□□□ -2.13
CLDN3O15551 AC087884.1-201ENST00000469738 328 ntBASIC1.75□□□□□ -2.13
CLDN3O15551 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.75□□□□□ -2.13
CLDN3O15551 AC005741.1-201ENST00000511094 432 ntBASIC1.75□□□□□ -2.13
CLDN3O15551 RN7SKP219-201ENST00000516825 296 ntBASIC1.75□□□□□ -2.13
CLDN3O15551 SNORA25.17-201ENST00000517184 124 ntBASIC1.75□□□□□ -2.13
CLDN3O15551 AC069113.1-201ENST00000517763 267 ntBASIC1.75□□□□□ -2.13
CLDN3O15551 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.75□□□□□ -2.13
CLDN3O15551 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.75□□□□□ -2.13
CLDN3O15551 AC025449.1-201ENST00000603896 529 ntBASIC1.75□□□□□ -2.13
CLDN3O15551 ZNF680P1-201ENST00000436625 1469 ntBASIC1.75□□□□□ -2.13
CLDN3O15551 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CLDN3O15551 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CLDN3O15551 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CLDN3O15551 SNORA48.1-201ENST00000390879 135 ntBASIC1.74□□□□□ -2.13
CLDN3O15551 SNORA67.5-201ENST00000391036 107 ntBASIC1.74□□□□□ -2.13
CLDN3O15551 AC009310.1-201ENST00000414414 451 ntBASIC1.74□□□□□ -2.13
CLDN3O15551 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.74□□□□□ -2.13
CLDN3O15551 AL117339.3-201ENST00000418733 162 ntBASIC1.74□□□□□ -2.13
CLDN3O15551 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.74□□□□□ -2.13
CLDN3O15551 AC132479.1-201ENST00000449160 144 ntBASIC1.74□□□□□ -2.13
CLDN3O15551 AC013470.1-201ENST00000453438 462 ntBASIC1.74□□□□□ -2.13
CLDN3O15551 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.74□□□□□ -2.13
CLDN3O15551 RNU6-237P-201ENST00000515985 71 ntBASIC1.74□□□□□ -2.13
CLDN3O15551 RNVU1-2-201ENST00000516326 135 ntBASIC1.74□□□□□ -2.13
CLDN3O15551 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.74□□□□□ -2.13
CLDN3O15551 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.74□□□□□ -2.13
CLDN3O15551 AGGF1P4-201ENST00000568249 801 ntBASIC1.74□□□□□ -2.13
CLDN3O15551 AL391840.1-201ENST00000571144 367 ntBASIC1.74□□□□□ -2.13
CLDN3O15551 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.74□□□□□ -2.13
CLDN3O15551 AC103810.8-201ENST00000607347 118 ntBASIC1.74□□□□□ -2.13
CLDN3O15551 AC073114.1-201ENST00000612027 490 ntBASIC1.74□□□□□ -2.13
CLDN3O15551 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CLDN3O15551 LINC02555-201ENST00000563933 1951 ntBASIC1.73□□□□□ -2.13
CLDN3O15551 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.73□□□□□ -2.13
CLDN3O15551 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.73□□□□□ -2.13
CLDN3O15551 RPS29P13-201ENST00000402041 169 ntBASIC1.73□□□□□ -2.13
CLDN3O15551 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.73□□□□□ -2.13
CLDN3O15551 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.73□□□□□ -2.13
CLDN3O15551 MTCO2P11-201ENST00000431069 680 ntBASIC1.73□□□□□ -2.13
CLDN3O15551 FTH1P25-201ENST00000447665 469 ntBASIC1.73□□□□□ -2.13
CLDN3O15551 AC027575.1-201ENST00000481064 460 ntBASIC1.73□□□□□ -2.13
CLDN3O15551 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.73□□□□□ -2.13
CLDN3O15551 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.73□□□□□ -2.13
CLDN3O15551 AC105417.1-201ENST00000514691 285 ntBASIC1.73□□□□□ -2.13
CLDN3O15551 RNU6-430P-201ENST00000517078 107 ntBASIC1.73□□□□□ -2.13
CLDN3O15551 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.73□□□□□ -2.13
CLDN3O15551 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.73□□□□□ -2.13
CLDN3O15551 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.73□□□□□ -2.13
CLDN3O15551 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.73□□□□□ -2.13
CLDN3O15551 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.73□□□□□ -2.13
CLDN3O15551 VN1R107P-201ENST00000601784 209 ntBASIC1.73□□□□□ -2.13
CLDN3O15551 AC068944.2-201ENST00000610373 403 ntBASIC1.73□□□□□ -2.13
CLDN3O15551 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CLDN3O15551 AC120349.3-201ENST00000624377 529 ntBASIC1.73□□□□□ -2.13
CLDN3O15551 RNU6-552P-201ENST00000362869 119 ntBASIC1.72□□□□□ -2.13
CLDN3O15551 RNU6-1120P-201ENST00000362988 108 ntBASIC1.72□□□□□ -2.13
CLDN3O15551 SNORD114-6-201ENST00000364393 72 ntBASIC1.72□□□□□ -2.13
CLDN3O15551 MTCO3P41-201ENST00000414801 328 ntBASIC1.72□□□□□ -2.13
CLDN3O15551 MTATP6P18-201ENST00000417994 673 ntBASIC1.72□□□□□ -2.13
CLDN3O15551 NCOR1P3-201ENST00000420479 303 ntBASIC1.72□□□□□ -2.13
CLDN3O15551 AC078809.1-201ENST00000427601 140 ntBASIC1.72□□□□□ -2.13
CLDN3O15551 SNAP23P1-201ENST00000433229 246 ntBASIC1.72□□□□□ -2.13
CLDN3O15551 MTND4P32-201ENST00000437189 1237 ntBASIC1.72□□□□□ -2.13
CLDN3O15551 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.72□□□□□ -2.13
CLDN3O15551 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.72□□□□□ -2.13
CLDN3O15551 COPS8P3-201ENST00000526024 482 ntBASIC1.72□□□□□ -2.13
CLDN3O15551 SNORD53B-201ENST00000577887 78 ntBASIC1.72□□□□□ -2.13
CLDN3O15551 MIR3169-201ENST00000578032 83 ntBASIC1.72□□□□□ -2.13
CLDN3O15551 MIR3923-201ENST00000579521 83 ntBASIC1.72□□□□□ -2.13
CLDN3O15551 AC012507.3-201ENST00000603556 477 ntBASIC1.72□□□□□ -2.13
CLDN3O15551 AC109347.2-201ENST00000610220 349 ntBASIC1.72□□□□□ -2.13
CLDN3O15551 U2.17-201ENST00000611454 95 ntBASIC1.72□□□□□ -2.13
CLDN3O15551 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.72□□□□□ -2.13
CLDN3O15551 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.72□□□□□ -2.13
CLDN3O15551 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CLDN3O15551 SNORD32A-201ENST00000364805 84 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 158 ms