Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.77□□□□□ -2.13
MSH4O15457 AL359314.1-201ENST00000616913 261 ntBASIC1.77□□□□□ -2.13
MSH4O15457 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.77□□□□□ -2.13
MSH4O15457 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
MSH4O15457 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
MSH4O15457 RNU6-1285P-201ENST00000363480 105 ntBASIC1.76□□□□□ -2.13
MSH4O15457 SNORD116-1-201ENST00000384335 95 ntBASIC1.76□□□□□ -2.13
MSH4O15457 RNU6-692P-201ENST00000384496 107 ntBASIC1.76□□□□□ -2.13
MSH4O15457 SNORA67.5-201ENST00000391036 107 ntBASIC1.76□□□□□ -2.13
MSH4O15457 BTF3L4P2-201ENST00000392798 346 ntBASIC1.76□□□□□ -2.13
MSH4O15457 MIR1323-201ENST00000408090 73 ntBASIC1.76□□□□□ -2.13
MSH4O15457 MIR1262-201ENST00000408276 93 ntBASIC1.76□□□□□ -2.13
MSH4O15457 IFNA20P-201ENST00000436840 528 ntBASIC1.76□□□□□ -2.13
MSH4O15457 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.76□□□□□ -2.13
MSH4O15457 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.76□□□□□ -2.13
MSH4O15457 RN7SKP210-201ENST00000459176 261 ntBASIC1.76□□□□□ -2.13
MSH4O15457 RPS3AP17-201ENST00000472594 777 ntBASIC1.76□□□□□ -2.13
MSH4O15457 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.76□□□□□ -2.13
MSH4O15457 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.76□□□□□ -2.13
MSH4O15457 HIF1AP1-201ENST00000553642 175 ntBASIC1.76□□□□□ -2.13
MSH4O15457 AC006362.1-201ENST00000567392 174 ntBASIC1.76□□□□□ -2.13
MSH4O15457 AC103987.3-201ENST00000582071 292 ntBASIC1.76□□□□□ -2.13
MSH4O15457 AL096840.1-201ENST00000603287 93 ntBASIC1.76□□□□□ -2.13
MSH4O15457 AL391646.1-201ENST00000603860 190 ntBASIC1.76□□□□□ -2.13
MSH4O15457 AL645939.4-201ENST00000604495 135 ntBASIC1.76□□□□□ -2.13
MSH4O15457 AL627230.6-201ENST00000611129 280 ntBASIC1.76□□□□□ -2.13
MSH4O15457 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
MSH4O15457 AC005609.4-201ENST00000625071 447 ntBASIC1.76□□□□□ -2.13
MSH4O15457 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
MSH4O15457 AL354685.2-201ENST00000448218 1447 ntBASIC1.75□□□□□ -2.13
MSH4O15457 RNU6-661P-201ENST00000362409 107 ntBASIC1.75□□□□□ -2.13
MSH4O15457 Y_RNA.296-201ENST00000364930 108 ntBASIC1.75□□□□□ -2.13
MSH4O15457 RNU6-996P-201ENST00000365438 107 ntBASIC1.75□□□□□ -2.13
MSH4O15457 Y_RNA.359-201ENST00000365498 102 ntBASIC1.75□□□□□ -2.13
MSH4O15457 Y_RNA.399-201ENST00000383955 105 ntBASIC1.75□□□□□ -2.13
MSH4O15457 U8.10-201ENST00000384260 133 ntBASIC1.75□□□□□ -2.13
MSH4O15457 SNORD14D-201ENST00000384390 87 ntBASIC1.75□□□□□ -2.13
MSH4O15457 MIR29C-201ENST00000385231 88 ntBASIC1.75□□□□□ -2.13
MSH4O15457 AL117339.3-201ENST00000418733 162 ntBASIC1.75□□□□□ -2.13
MSH4O15457 CBX3P6-201ENST00000430257 527 ntBASIC1.75□□□□□ -2.13
MSH4O15457 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.75□□□□□ -2.13
MSH4O15457 AC002486.1-201ENST00000435098 391 ntBASIC1.75□□□□□ -2.13
MSH4O15457 AL360221.1-201ENST00000445989 335 ntBASIC1.75□□□□□ -2.13
MSH4O15457 AC245102.2-201ENST00000448956 180 ntBASIC1.75□□□□□ -2.13
MSH4O15457 AC013470.1-201ENST00000453438 462 ntBASIC1.75□□□□□ -2.13
MSH4O15457 RNU7-167P-201ENST00000459160 62 ntBASIC1.75□□□□□ -2.13
MSH4O15457 AC009646.1-201ENST00000510455 318 ntBASIC1.75□□□□□ -2.13
MSH4O15457 PTP4A1P4-201ENST00000512479 322 ntBASIC1.75□□□□□ -2.13
MSH4O15457 MTND3P5-201ENST00000512798 333 ntBASIC1.75□□□□□ -2.13
MSH4O15457 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.75□□□□□ -2.13
MSH4O15457 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.75□□□□□ -2.13
MSH4O15457 AL034555.1-201ENST00000604816 211 ntBASIC1.75□□□□□ -2.13
MSH4O15457 BX248123.2-201ENST00000606318 124 ntBASIC1.75□□□□□ -2.13
MSH4O15457 AC007684.1-201ENST00000609671 477 ntBASIC1.75□□□□□ -2.13
MSH4O15457 AC091932.3-201ENST00000624223 323 ntBASIC1.75□□□□□ -2.13
MSH4O15457 AC090582.1-201ENST00000636321 199 ntBASIC1.75□□□□□ -2.13
MSH4O15457 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
MSH4O15457 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
MSH4O15457 RNU6-60P-201ENST00000364792 103 ntBASIC1.74□□□□□ -2.13
MSH4O15457 RNU6-827P-201ENST00000365553 106 ntBASIC1.74□□□□□ -2.13
MSH4O15457 RNU6-1103P-201ENST00000384150 107 ntBASIC1.74□□□□□ -2.13
MSH4O15457 RNU6-43P-201ENST00000384302 107 ntBASIC1.74□□□□□ -2.13
MSH4O15457 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.74□□□□□ -2.13
MSH4O15457 HMGB1P18-201ENST00000438801 619 ntBASIC1.74□□□□□ -2.13
MSH4O15457 AL353689.1-201ENST00000438895 199 ntBASIC1.74□□□□□ -2.13
MSH4O15457 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.74□□□□□ -2.13
MSH4O15457 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.74□□□□□ -2.13
MSH4O15457 RPL23AP3-201ENST00000453844 468 ntBASIC1.74□□□□□ -2.13
MSH4O15457 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.74□□□□□ -2.13
MSH4O15457 AC093534.1-201ENST00000504977 132 ntBASIC1.74□□□□□ -2.13
MSH4O15457 AK3P2-201ENST00000507976 429 ntBASIC1.74□□□□□ -2.13
MSH4O15457 AC069113.1-201ENST00000517763 267 ntBASIC1.74□□□□□ -2.13
MSH4O15457 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.74□□□□□ -2.13
MSH4O15457 COPS8P3-201ENST00000526024 482 ntBASIC1.74□□□□□ -2.13
MSH4O15457 AC103996.1-201ENST00000555468 102 ntBASIC1.74□□□□□ -2.13
MSH4O15457 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.74□□□□□ -2.13
MSH4O15457 AC004223.2-201ENST00000590309 544 ntBASIC1.74□□□□□ -2.13
MSH4O15457 AC005034.5-201ENST00000604219 466 ntBASIC1.74□□□□□ -2.13
MSH4O15457 AC018889.1-201ENST00000605372 397 ntBASIC1.74□□□□□ -2.13
MSH4O15457 RN7SKP299-201ENST00000606679 301 ntBASIC1.74□□□□□ -2.13
MSH4O15457 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
MSH4O15457 U2.17-201ENST00000611454 95 ntBASIC1.74□□□□□ -2.13
MSH4O15457 AL354950.2-201ENST00000617939 290 ntBASIC1.74□□□□□ -2.13
MSH4O15457 MIR1248-201ENST00000629190 106 ntBASIC1.74□□□□□ -2.13
MSH4O15457 SNORD98-201ENST00000636377 67 ntBASIC1.74□□□□□ -2.13
MSH4O15457 RNU1-42P-201ENST00000364033 160 ntBASIC1.73□□□□□ -2.13
MSH4O15457 RNU6-1141P-201ENST00000364520 107 ntBASIC1.73□□□□□ -2.13
MSH4O15457 RNU6-234P-201ENST00000365229 104 ntBASIC1.73□□□□□ -2.13
MSH4O15457 Y_RNA.381-201ENST00000365666 102 ntBASIC1.73□□□□□ -2.13
MSH4O15457 RPS29P13-201ENST00000402041 169 ntBASIC1.73□□□□□ -2.13
MSH4O15457 SRIP3-201ENST00000413200 219 ntBASIC1.73□□□□□ -2.13
MSH4O15457 CDK8P2-201ENST00000415020 547 ntBASIC1.73□□□□□ -2.13
MSH4O15457 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.73□□□□□ -2.13
MSH4O15457 MTCO2P19-201ENST00000427513 598 ntBASIC1.73□□□□□ -2.13
MSH4O15457 AC010975.2-201ENST00000427781 588 ntBASIC1.73□□□□□ -2.13
MSH4O15457 AC073415.1-201ENST00000449240 153 ntBASIC1.73□□□□□ -2.13
MSH4O15457 RPL31P3-201ENST00000458430 332 ntBASIC1.73□□□□□ -2.13
MSH4O15457 RNU7-180P-201ENST00000459240 63 ntBASIC1.73□□□□□ -2.13
MSH4O15457 AC022447.4-201ENST00000504053 364 ntBASIC1.73□□□□□ -2.13
MSH4O15457 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 141.4 ms