Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AC022306.2-201ENST00000617563 647 ntBASIC2.57□□□□□ -2
ATP2A1O14983 AC009831.4-201ENST00000620744 325 ntBASIC2.57□□□□□ -2
ATP2A1O14983 MIR6873-201ENST00000622788 63 ntBASIC2.57□□□□□ -2
ATP2A1O14983 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.57□□□□□ -2
ATP2A1O14983 MTND4P23-201ENST00000447723 1363 ntBASIC2.57□□□□□ -2
ATP2A1O14983 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.57□□□□□ -2
ATP2A1O14983 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.57□□□□□ -2
ATP2A1O14983 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
ATP2A1O14983 ZNF271P-202ENST00000465539 1970 ntBASIC2.56□□□□□ -2
ATP2A1O14983 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.56□□□□□ -2
ATP2A1O14983 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.56□□□□□ -2
ATP2A1O14983 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.56□□□□□ -2
ATP2A1O14983 AP006437.1-201ENST00000641440 3685 ntBASIC2.56□□□□□ -2
ATP2A1O14983 RNU6-845P-201ENST00000362578 103 ntBASIC2.56□□□□□ -2
ATP2A1O14983 RNU6-1140P-201ENST00000410517 106 ntBASIC2.56□□□□□ -2
ATP2A1O14983 AC098614.3-201ENST00000438957 440 ntBASIC2.56□□□□□ -2
ATP2A1O14983 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.56□□□□□ -2
ATP2A1O14983 AMD1P1-201ENST00000457220 922 ntBASIC2.56□□□□□ -2
ATP2A1O14983 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.56□□□□□ -2
ATP2A1O14983 U8.21-201ENST00000459536 136 ntBASIC2.56□□□□□ -2
ATP2A1O14983 MTCO1P29-201ENST00000496868 288 ntBASIC2.56□□□□□ -2
ATP2A1O14983 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.56□□□□□ -2
ATP2A1O14983 SCARNA3-201ENST00000517097 143 ntBASIC2.56□□□□□ -2
ATP2A1O14983 RNU1-104P-201ENST00000517280 175 ntBASIC2.56□□□□□ -2
ATP2A1O14983 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.56□□□□□ -2
ATP2A1O14983 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.56□□□□□ -2
ATP2A1O14983 MIR548S-201ENST00000581352 82 ntBASIC2.56□□□□□ -2
ATP2A1O14983 AL356280.1-201ENST00000603614 379 ntBASIC2.56□□□□□ -2
ATP2A1O14983 AC007792.1-201ENST00000623023 402 ntBASIC2.56□□□□□ -2
ATP2A1O14983 MIR219B-201ENST00000637023 88 ntBASIC2.56□□□□□ -2
ATP2A1O14983 AC241585.2-209ENST00000638217 143 ntBASIC2.56□□□□□ -2
ATP2A1O14983 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ATP2A1O14983 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.55□□□□□ -2
ATP2A1O14983 RNU1-57P-201ENST00000384491 166 ntBASIC2.55□□□□□ -2
ATP2A1O14983 RNU6-692P-201ENST00000384496 107 ntBASIC2.55□□□□□ -2
ATP2A1O14983 RNU6-1222P-201ENST00000384615 107 ntBASIC2.55□□□□□ -2
ATP2A1O14983 SNORA64-201ENST00000384674 134 ntBASIC2.55□□□□□ -2
ATP2A1O14983 RNU6-95P-201ENST00000384697 107 ntBASIC2.55□□□□□ -2
ATP2A1O14983 MIR544A-201ENST00000384855 91 ntBASIC2.55□□□□□ -2
ATP2A1O14983 CYCSP48-201ENST00000417124 323 ntBASIC2.55□□□□□ -2
ATP2A1O14983 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.55□□□□□ -2
ATP2A1O14983 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.55□□□□□ -2
ATP2A1O14983 snoU13.14-201ENST00000459372 104 ntBASIC2.55□□□□□ -2
ATP2A1O14983 AC130509.1-201ENST00000464158 433 ntBASIC2.55□□□□□ -2
ATP2A1O14983 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.55□□□□□ -2
ATP2A1O14983 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.55□□□□□ -2
ATP2A1O14983 SNORA25.11-201ENST00000515935 105 ntBASIC2.55□□□□□ -2
ATP2A1O14983 RNU6-1088P-201ENST00000516850 104 ntBASIC2.55□□□□□ -2
ATP2A1O14983 RNU6-273P-201ENST00000516937 96 ntBASIC2.55□□□□□ -2
ATP2A1O14983 RNA5SP454-201ENST00000517231 127 ntBASIC2.55□□□□□ -2
ATP2A1O14983 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.55□□□□□ -2
ATP2A1O14983 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.55□□□□□ -2
ATP2A1O14983 MIR3199-1-201ENST00000582434 88 ntBASIC2.55□□□□□ -2
ATP2A1O14983 AC073410.2-201ENST00000603240 332 ntBASIC2.55□□□□□ -2
ATP2A1O14983 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.54□□□□□ -2
ATP2A1O14983 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.54□□□□□ -2
ATP2A1O14983 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.54□□□□□ -2
ATP2A1O14983 MTND4P27-201ENST00000450813 1354 ntBASIC2.54□□□□□ -2
ATP2A1O14983 SNORA72.1-201ENST00000363485 129 ntBASIC2.54□□□□□ -2
ATP2A1O14983 Y_RNA.303-201ENST00000364998 94 ntBASIC2.54□□□□□ -2
ATP2A1O14983 MIR218-1-201ENST00000384999 110 ntBASIC2.54□□□□□ -2
ATP2A1O14983 U6atac.2-201ENST00000408644 118 ntBASIC2.54□□□□□ -2
ATP2A1O14983 AL030996.1-201ENST00000411430 235 ntBASIC2.54□□□□□ -2
ATP2A1O14983 AP000275.1-201ENST00000411943 390 ntBASIC2.54□□□□□ -2
ATP2A1O14983 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.54□□□□□ -2
ATP2A1O14983 AL590632.1-201ENST00000424289 371 ntBASIC2.54□□□□□ -2
ATP2A1O14983 RPL30P4-201ENST00000429309 333 ntBASIC2.54□□□□□ -2
ATP2A1O14983 HMGN2P3-201ENST00000433603 273 ntBASIC2.54□□□□□ -2
ATP2A1O14983 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.54□□□□□ -2
ATP2A1O14983 HMGN2P5-201ENST00000436882 273 ntBASIC2.54□□□□□ -2
ATP2A1O14983 PPP1R2P5-201ENST00000457256 603 ntBASIC2.54□□□□□ -2
ATP2A1O14983 snoU13.23-201ENST00000458863 104 ntBASIC2.54□□□□□ -2
ATP2A1O14983 RNU7-26P-201ENST00000458980 63 ntBASIC2.54□□□□□ -2
ATP2A1O14983 AC080013.2-201ENST00000460866 323 ntBASIC2.54□□□□□ -2
ATP2A1O14983 RPL30P12-201ENST00000474666 353 ntBASIC2.54□□□□□ -2
ATP2A1O14983 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.54□□□□□ -2
ATP2A1O14983 SMURF2P1-201ENST00000514992 481 ntBASIC2.54□□□□□ -2
ATP2A1O14983 SCARNA16.3-201ENST00000516595 184 ntBASIC2.54□□□□□ -2
ATP2A1O14983 RNU6-566P-201ENST00000516790 107 ntBASIC2.54□□□□□ -2
ATP2A1O14983 RNA5SP402-201ENST00000517148 110 ntBASIC2.54□□□□□ -2
ATP2A1O14983 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.54□□□□□ -2
ATP2A1O14983 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.54□□□□□ -2
ATP2A1O14983 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.54□□□□□ -2
ATP2A1O14983 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.54□□□□□ -2
ATP2A1O14983 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.54□□□□□ -2
ATP2A1O14983 AP001836.1-201ENST00000604675 523 ntBASIC2.54□□□□□ -2
ATP2A1O14983 AL356157.2-201ENST00000605122 111 ntBASIC2.54□□□□□ -2
ATP2A1O14983 AC104237.2-201ENST00000612456 443 ntBASIC2.54□□□□□ -2
ATP2A1O14983 HMGB1P24-202ENST00000615653 685 ntBASIC2.54□□□□□ -2
ATP2A1O14983 AL159153.1-201ENST00000619688 317 ntBASIC2.54□□□□□ -2
ATP2A1O14983 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
ATP2A1O14983 ZNF355P-201ENST00000427301 3216 ntBASIC2.53□□□□□ -2
ATP2A1O14983 SNORA67.1-201ENST00000364749 141 ntBASIC2.53□□□□□ -2
ATP2A1O14983 MIR1289-2-201ENST00000408360 111 ntBASIC2.53□□□□□ -2
ATP2A1O14983 RNU6-325P-201ENST00000411132 105 ntBASIC2.53□□□□□ -2
ATP2A1O14983 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.53□□□□□ -2
ATP2A1O14983 AL139396.1-201ENST00000421137 167 ntBASIC2.53□□□□□ -2
ATP2A1O14983 EIF4EP4-201ENST00000424916 578 ntBASIC2.53□□□□□ -2
ATP2A1O14983 RPL39P29-201ENST00000447779 157 ntBASIC2.53□□□□□ -2
ATP2A1O14983 MTND1P17-201ENST00000448961 204 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms