Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PCDH17O14917 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.84□□□□□ -1.95
PCDH17O14917 MIR5571-201ENST00000577998 113 ntBASIC2.84□□□□□ -1.95
PCDH17O14917 MIR4672-201ENST00000583126 81 ntBASIC2.84□□□□□ -1.95
PCDH17O14917 RPL12P50-201ENST00000603116 116 ntBASIC2.84□□□□□ -1.95
PCDH17O14917 AL034555.1-201ENST00000604816 211 ntBASIC2.84□□□□□ -1.95
PCDH17O14917 AL050343.2-201ENST00000607338 280 ntBASIC2.84□□□□□ -1.95
PCDH17O14917 AC137590.2-201ENST00000619709 240 ntBASIC2.84□□□□□ -1.95
PCDH17O14917 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.84□□□□□ -1.95
PCDH17O14917 SNORA43.4-201ENST00000629559 138 ntBASIC2.84□□□□□ -1.95
PCDH17O14917 SNORD98-201ENST00000636377 67 ntBASIC2.84□□□□□ -1.95
PCDH17O14917 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.84□□□□□ -1.95
PCDH17O14917 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.84□□□□□ -1.96
PCDH17O14917 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.84□□□□□ -1.96
PCDH17O14917 Y_RNA.146-201ENST00000363549 102 ntBASIC2.83□□□□□ -1.96
PCDH17O14917 RNU1-109P-201ENST00000383960 147 ntBASIC2.83□□□□□ -1.96
PCDH17O14917 RNU6-890P-201ENST00000384121 107 ntBASIC2.83□□□□□ -1.96
PCDH17O14917 SNORA54-201ENST00000384281 123 ntBASIC2.83□□□□□ -1.96
PCDH17O14917 CBX3P9-201ENST00000402326 552 ntBASIC2.83□□□□□ -1.96
PCDH17O14917 AL590135.1-201ENST00000422215 156 ntBASIC2.83□□□□□ -1.96
PCDH17O14917 AC019205.3-201ENST00000424573 156 ntBASIC2.83□□□□□ -1.96
PCDH17O14917 AIMP1P2-201ENST00000425294 312 ntBASIC2.83□□□□□ -1.96
PCDH17O14917 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.83□□□□□ -1.96
PCDH17O14917 AC016700.2-201ENST00000446011 156 ntBASIC2.83□□□□□ -1.96
PCDH17O14917 UBE2V1P7-201ENST00000446395 340 ntBASIC2.83□□□□□ -1.96
PCDH17O14917 AL353705.4-201ENST00000449661 238 ntBASIC2.83□□□□□ -1.96
PCDH17O14917 AC080013.2-201ENST00000460866 323 ntBASIC2.83□□□□□ -1.96
PCDH17O14917 AC015911.1-201ENST00000495111 156 ntBASIC2.83□□□□□ -1.96
PCDH17O14917 AC023141.11-201ENST00000508864 202 ntBASIC2.83□□□□□ -1.96
PCDH17O14917 RNU6-264P-201ENST00000517134 104 ntBASIC2.83□□□□□ -1.96
PCDH17O14917 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.83□□□□□ -1.96
PCDH17O14917 MIR5696-201ENST00000578474 85 ntBASIC2.83□□□□□ -1.96
PCDH17O14917 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.83□□□□□ -1.96
PCDH17O14917 SCARNA4-201ENST00000629045 128 ntBASIC2.83□□□□□ -1.96
PCDH17O14917 AC080128.1-201ENST00000474389 1917 ntBASIC2.83□□□□□ -1.96
PCDH17O14917 AC108206.1-201ENST00000570186 4159 ntBASIC2.83□□□□□ -1.96
PCDH17O14917 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.83□□□□□ -1.96
PCDH17O14917 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.83□□□□□ -1.96
PCDH17O14917 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PCDH17O14917 AL161431.1-201ENST00000618966 4205 ntBASIC2.82□□□□□ -1.96
PCDH17O14917 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PCDH17O14917 Y_RNA.40-201ENST00000362645 93 ntBASIC2.82□□□□□ -1.96
PCDH17O14917 Y_RNA.187-201ENST00000363918 113 ntBASIC2.82□□□□□ -1.96
PCDH17O14917 RNU6-461P-201ENST00000364195 107 ntBASIC2.82□□□□□ -1.96
PCDH17O14917 RNU4-9P-201ENST00000364951 139 ntBASIC2.82□□□□□ -1.96
PCDH17O14917 SNORA9.2-201ENST00000365361 133 ntBASIC2.82□□□□□ -1.96
PCDH17O14917 Y_RNA.533-201ENST00000384596 114 ntBASIC2.82□□□□□ -1.96
PCDH17O14917 RNU6-1328P-201ENST00000410938 106 ntBASIC2.82□□□□□ -1.96
PCDH17O14917 RNU6-1304P-201ENST00000411374 106 ntBASIC2.82□□□□□ -1.96
PCDH17O14917 AC243428.1-201ENST00000421099 264 ntBASIC2.82□□□□□ -1.96
PCDH17O14917 AF228730.4-201ENST00000421457 183 ntBASIC2.82□□□□□ -1.96
PCDH17O14917 AL590556.1-201ENST00000423231 483 ntBASIC2.82□□□□□ -1.96
PCDH17O14917 AC022018.1-201ENST00000430685 241 ntBASIC2.82□□□□□ -1.96
PCDH17O14917 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.82□□□□□ -1.96
PCDH17O14917 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.82□□□□□ -1.96
PCDH17O14917 AP004217.1-201ENST00000480579 346 ntBASIC2.82□□□□□ -1.96
PCDH17O14917 RN7SL633P-201ENST00000488974 297 ntBASIC2.82□□□□□ -1.96
PCDH17O14917 HMGB1P35-201ENST00000503360 598 ntBASIC2.82□□□□□ -1.96
PCDH17O14917 AC093303.1-201ENST00000514549 295 ntBASIC2.82□□□□□ -1.96
PCDH17O14917 RNA5SP76-201ENST00000516277 87 ntBASIC2.82□□□□□ -1.96
PCDH17O14917 RNA5SP384-201ENST00000516615 116 ntBASIC2.82□□□□□ -1.96
PCDH17O14917 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.82□□□□□ -1.96
PCDH17O14917 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.82□□□□□ -1.96
PCDH17O14917 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.82□□□□□ -1.96
PCDH17O14917 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.82□□□□□ -1.96
PCDH17O14917 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.82□□□□□ -1.96
PCDH17O14917 AC080078.3-201ENST00000605407 463 ntBASIC2.82□□□□□ -1.96
PCDH17O14917 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.82□□□□□ -1.96
PCDH17O14917 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
PCDH17O14917 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PCDH17O14917 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
PCDH17O14917 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.81□□□□□ -1.96
PCDH17O14917 MIR218-1-201ENST00000384999 110 ntBASIC2.81□□□□□ -1.96
PCDH17O14917 HMGN2P35-201ENST00000412164 270 ntBASIC2.81□□□□□ -1.96
PCDH17O14917 AC008267.5-201ENST00000424928 265 ntBASIC2.81□□□□□ -1.96
PCDH17O14917 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.81□□□□□ -1.96
PCDH17O14917 MTCO3P10-201ENST00000455912 772 ntBASIC2.81□□□□□ -1.96
PCDH17O14917 RN7SKP210-201ENST00000459176 261 ntBASIC2.81□□□□□ -1.96
PCDH17O14917 AC090525.1-201ENST00000479116 478 ntBASIC2.81□□□□□ -1.96
PCDH17O14917 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.81□□□□□ -1.96
PCDH17O14917 RNU5F-2P-201ENST00000516066 82 ntBASIC2.81□□□□□ -1.96
PCDH17O14917 CBX3P8-201ENST00000532412 525 ntBASIC2.81□□□□□ -1.96
PCDH17O14917 RPL30P11-203ENST00000598995 310 ntBASIC2.81□□□□□ -1.96
PCDH17O14917 AL158827.2-201ENST00000602494 330 ntBASIC2.81□□□□□ -1.96
PCDH17O14917 AL449363.1-201ENST00000617815 186 ntBASIC2.81□□□□□ -1.96
PCDH17O14917 AC092608.2-201ENST00000624427 218 ntBASIC2.81□□□□□ -1.96
PCDH17O14917 AL691447.3-201ENST00000635020 330 ntBASIC2.81□□□□□ -1.96
PCDH17O14917 MTND4P27-201ENST00000450813 1354 ntBASIC2.81□□□□□ -1.96
PCDH17O14917 AC006026.1-201ENST00000444025 1803 ntBASIC2.81□□□□□ -1.96
PCDH17O14917 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.81□□□□□ -1.96
PCDH17O14917 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PCDH17O14917 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
PCDH17O14917 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.8□□□□□ -1.96
PCDH17O14917 RNU6-595P-201ENST00000363944 107 ntBASIC2.8□□□□□ -1.96
PCDH17O14917 RNU6-1040P-201ENST00000383974 107 ntBASIC2.8□□□□□ -1.96
PCDH17O14917 RNU6-331P-201ENST00000384724 107 ntBASIC2.8□□□□□ -1.96
PCDH17O14917 MIR627-201ENST00000384979 97 ntBASIC2.8□□□□□ -1.96
PCDH17O14917 MIR29B2-201ENST00000385055 81 ntBASIC2.8□□□□□ -1.96
PCDH17O14917 SNORD67-201ENST00000390833 111 ntBASIC2.8□□□□□ -1.96
PCDH17O14917 RNU6-700P-201ENST00000391043 107 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms