Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
SOX1O00570 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.06□□□□□ -1.76
SOX1O00570 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.05□□□□□ -1.76
SOX1O00570 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SOX1O00570 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SOX1O00570 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SOX1O00570 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
SOX1O00570 ADAM3A-203ENST00000461344 2157 ntBASIC4.05□□□□□ -1.76
SOX1O00570 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SOX1O00570 Y_RNA.488-201ENST00000384403 102 ntBASIC4.05□□□□□ -1.76
SOX1O00570 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.05□□□□□ -1.76
SOX1O00570 AL512633.1-201ENST00000399931 655 ntBASIC4.05□□□□□ -1.76
SOX1O00570 RN7SKP167-201ENST00000411047 285 ntBASIC4.05□□□□□ -1.76
SOX1O00570 AL160275.2-201ENST00000412010 394 ntBASIC4.05□□□□□ -1.76
SOX1O00570 HMGB1P37-201ENST00000439613 609 ntBASIC4.05□□□□□ -1.76
SOX1O00570 HMGN2P10-201ENST00000448085 265 ntBASIC4.05□□□□□ -1.76
SOX1O00570 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC4.05□□□□□ -1.76
SOX1O00570 RPL30P12-201ENST00000474666 353 ntBASIC4.05□□□□□ -1.76
SOX1O00570 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.05□□□□□ -1.76
SOX1O00570 AC140059.1-201ENST00000489238 361 ntBASIC4.05□□□□□ -1.76
SOX1O00570 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.05□□□□□ -1.76
SOX1O00570 RNU6-581P-201ENST00000516214 105 ntBASIC4.05□□□□□ -1.76
SOX1O00570 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SOX1O00570 MIR3145-201ENST00000580727 82 ntBASIC4.05□□□□□ -1.76
SOX1O00570 AL356575.1-201ENST00000603008 283 ntBASIC4.05□□□□□ -1.76
SOX1O00570 AC092628.2-201ENST00000622492 339 ntBASIC4.05□□□□□ -1.76
SOX1O00570 AC091932.3-201ENST00000624223 323 ntBASIC4.05□□□□□ -1.76
SOX1O00570 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.05□□□□□ -1.76
SOX1O00570 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.05□□□□□ -1.76
SOX1O00570 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SOX1O00570 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SOX1O00570 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SOX1O00570 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
SOX1O00570 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.04□□□□□ -1.76
SOX1O00570 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
SOX1O00570 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
SOX1O00570 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
SOX1O00570 RNU6-600P-201ENST00000362524 99 ntBASIC4.04□□□□□ -1.76
SOX1O00570 RNU6-1290P-201ENST00000362957 109 ntBASIC4.04□□□□□ -1.76
SOX1O00570 Y_RNA.238-201ENST00000364441 102 ntBASIC4.04□□□□□ -1.76
SOX1O00570 RNU6-487P-201ENST00000365430 104 ntBASIC4.04□□□□□ -1.76
SOX1O00570 RNU6-417P-201ENST00000384712 107 ntBASIC4.04□□□□□ -1.76
SOX1O00570 Y_RNA.568-201ENST00000384742 113 ntBASIC4.04□□□□□ -1.76
SOX1O00570 RNU2-54P-201ENST00000410299 190 ntBASIC4.04□□□□□ -1.76
SOX1O00570 RNU6-1199P-201ENST00000411249 104 ntBASIC4.04□□□□□ -1.76
SOX1O00570 ELOCP21-201ENST00000412558 336 ntBASIC4.04□□□□□ -1.76
SOX1O00570 RPS15AP5-201ENST00000436276 388 ntBASIC4.04□□□□□ -1.76
SOX1O00570 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.04□□□□□ -1.76
SOX1O00570 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.04□□□□□ -1.76
SOX1O00570 AC005840.1-201ENST00000498412 377 ntBASIC4.04□□□□□ -1.76
SOX1O00570 AC005921.1-201ENST00000510589 286 ntBASIC4.04□□□□□ -1.76
SOX1O00570 RNU5F-8P-201ENST00000515941 111 ntBASIC4.04□□□□□ -1.76
SOX1O00570 RNU6-313P-201ENST00000516317 112 ntBASIC4.04□□□□□ -1.76
SOX1O00570 RNU6-155P-201ENST00000516347 100 ntBASIC4.04□□□□□ -1.76
SOX1O00570 SUMO2P18-201ENST00000518873 252 ntBASIC4.04□□□□□ -1.76
SOX1O00570 AC021739.1-201ENST00000559631 174 ntBASIC4.04□□□□□ -1.76
SOX1O00570 MIR7106-201ENST00000612419 65 ntBASIC4.04□□□□□ -1.76
SOX1O00570 LINC00901.1-201ENST00000617252 152 ntBASIC4.04□□□□□ -1.76
SOX1O00570 AC091895.1-201ENST00000624494 256 ntBASIC4.04□□□□□ -1.76
SOX1O00570 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SOX1O00570 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SOX1O00570 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SOX1O00570 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SOX1O00570 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SOX1O00570 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
SOX1O00570 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SOX1O00570 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
SOX1O00570 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.03□□□□□ -1.76
SOX1O00570 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SOX1O00570 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SOX1O00570 Y_RNA.23-201ENST00000362496 106 ntBASIC4.03□□□□□ -1.76
SOX1O00570 RNU6-1272P-201ENST00000362776 107 ntBASIC4.03□□□□□ -1.76
SOX1O00570 Y_RNA.121-201ENST00000363309 113 ntBASIC4.03□□□□□ -1.76
SOX1O00570 Y_RNA.357-201ENST00000365487 109 ntBASIC4.03□□□□□ -1.76
SOX1O00570 RNA5SP475-201ENST00000410568 110 ntBASIC4.03□□□□□ -1.76
SOX1O00570 AC019205.3-201ENST00000424573 156 ntBASIC4.03□□□□□ -1.76
SOX1O00570 BTF3P11-201ENST00000426582 477 ntBASIC4.03□□□□□ -1.76
SOX1O00570 AL162725.1-201ENST00000435405 301 ntBASIC4.03□□□□□ -1.76
SOX1O00570 IFNA11P-201ENST00000446352 526 ntBASIC4.03□□□□□ -1.76
SOX1O00570 AC084357.1-201ENST00000473404 255 ntBASIC4.03□□□□□ -1.76
SOX1O00570 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.03□□□□□ -1.76
SOX1O00570 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.03□□□□□ -1.76
SOX1O00570 SNORA70.18-201ENST00000516696 98 ntBASIC4.03□□□□□ -1.76
SOX1O00570 AC115990.1-201ENST00000526957 301 ntBASIC4.03□□□□□ -1.76
SOX1O00570 AC090897.2-201ENST00000581715 130 ntBASIC4.03□□□□□ -1.76
SOX1O00570 AL008718.3-201ENST00000610217 321 ntBASIC4.03□□□□□ -1.76
SOX1O00570 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.03□□□□□ -1.76
SOX1O00570 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.03□□□□□ -1.76
SOX1O00570 USP8P1-201ENST00000494673 3183 ntBASIC4.03□□□□□ -1.76
SOX1O00570 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.03□□□□□ -1.76
SOX1O00570 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.03□□□□□ -1.76
SOX1O00570 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SOX1O00570 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SOX1O00570 RNU4-35P-201ENST00000362588 141 ntBASIC4.02□□□□□ -1.77
SOX1O00570 RNU1-62P-201ENST00000362599 164 ntBASIC4.02□□□□□ -1.77
SOX1O00570 RNA5SP189-201ENST00000364920 115 ntBASIC4.02□□□□□ -1.77
SOX1O00570 RNU6-622P-201ENST00000384272 103 ntBASIC4.02□□□□□ -1.77
SOX1O00570 RNU6-1154P-201ENST00000391001 104 ntBASIC4.02□□□□□ -1.77
SOX1O00570 RNU6-131P-201ENST00000391144 107 ntBASIC4.02□□□□□ -1.77
SOX1O00570 MIR320B2-201ENST00000408479 138 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms