Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 MIR3935-201ENST00000583472 104 ntBASIC2.22□□□□□ -2.05
HMGB1P1B2RPK0 AC012314.7-201ENST00000619693 93 ntBASIC2.22□□□□□ -2.05
HMGB1P1B2RPK0 AC022079.1-201ENST00000621546 602 ntBASIC2.22□□□□□ -2.05
HMGB1P1B2RPK0 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.22□□□□□ -2.05
HMGB1P1B2RPK0 MTND4P23-201ENST00000447723 1363 ntBASIC2.22□□□□□ -2.05
HMGB1P1B2RPK0 RNU6-545P-201ENST00000362681 104 ntBASIC2.21□□□□□ -2.06
HMGB1P1B2RPK0 RNU4-42P-201ENST00000364738 142 ntBASIC2.21□□□□□ -2.06
HMGB1P1B2RPK0 SNORD31B-201ENST00000364977 69 ntBASIC2.21□□□□□ -2.06
HMGB1P1B2RPK0 MIR549A-201ENST00000385268 96 ntBASIC2.21□□□□□ -2.06
HMGB1P1B2RPK0 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.21□□□□□ -2.06
HMGB1P1B2RPK0 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.21□□□□□ -2.06
HMGB1P1B2RPK0 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.21□□□□□ -2.06
HMGB1P1B2RPK0 AC007547.1-201ENST00000462177 490 ntBASIC2.21□□□□□ -2.06
HMGB1P1B2RPK0 RPL9P9-202ENST00000466501 579 ntBASIC2.21□□□□□ -2.06
HMGB1P1B2RPK0 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.21□□□□□ -2.06
HMGB1P1B2RPK0 AC025465.4-201ENST00000513422 638 ntBASIC2.21□□□□□ -2.06
HMGB1P1B2RPK0 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.21□□□□□ -2.06
HMGB1P1B2RPK0 SNORA67.7-201ENST00000516664 135 ntBASIC2.21□□□□□ -2.06
HMGB1P1B2RPK0 SNORA44.1-201ENST00000517031 108 ntBASIC2.21□□□□□ -2.06
HMGB1P1B2RPK0 CENPUP1-201ENST00000526649 1202 ntBASIC2.21□□□□□ -2.06
HMGB1P1B2RPK0 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.21□□□□□ -2.06
HMGB1P1B2RPK0 MIR4325-201ENST00000583049 90 ntBASIC2.21□□□□□ -2.06
HMGB1P1B2RPK0 AC008739.3-201ENST00000603262 127 ntBASIC2.21□□□□□ -2.06
HMGB1P1B2RPK0 AC009994.1-201ENST00000606889 253 ntBASIC2.21□□□□□ -2.06
HMGB1P1B2RPK0 AC006133.1-201ENST00000617106 264 ntBASIC2.21□□□□□ -2.06
HMGB1P1B2RPK0 AC009509.4-201ENST00000619202 509 ntBASIC2.21□□□□□ -2.06
HMGB1P1B2RPK0 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.21□□□□□ -2.06
HMGB1P1B2RPK0 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
HMGB1P1B2RPK0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.2□□□□□ -2.06
HMGB1P1B2RPK0 RNU6-112P-201ENST00000363599 104 ntBASIC2.2□□□□□ -2.06
HMGB1P1B2RPK0 RNU6-1317P-201ENST00000364582 104 ntBASIC2.2□□□□□ -2.06
HMGB1P1B2RPK0 RNU6-877P-201ENST00000383868 107 ntBASIC2.2□□□□□ -2.06
HMGB1P1B2RPK0 SNORA67.4-201ENST00000384688 142 ntBASIC2.2□□□□□ -2.06
HMGB1P1B2RPK0 MIR7-3-201ENST00000384898 110 ntBASIC2.2□□□□□ -2.06
HMGB1P1B2RPK0 Y_RNA.582-201ENST00000391023 95 ntBASIC2.2□□□□□ -2.06
HMGB1P1B2RPK0 AL030996.1-201ENST00000411430 235 ntBASIC2.2□□□□□ -2.06
HMGB1P1B2RPK0 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.2□□□□□ -2.06
HMGB1P1B2RPK0 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.2□□□□□ -2.06
HMGB1P1B2RPK0 USP9YP28-201ENST00000435142 589 ntBASIC2.2□□□□□ -2.06
HMGB1P1B2RPK0 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.2□□□□□ -2.06
HMGB1P1B2RPK0 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.2□□□□□ -2.06
HMGB1P1B2RPK0 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.2□□□□□ -2.06
HMGB1P1B2RPK0 FAM206BP-201ENST00000510179 541 ntBASIC2.2□□□□□ -2.06
HMGB1P1B2RPK0 RNU4-29P-201ENST00000515943 174 ntBASIC2.2□□□□□ -2.06
HMGB1P1B2RPK0 RN7SKP132-201ENST00000516001 208 ntBASIC2.2□□□□□ -2.06
HMGB1P1B2RPK0 RNA5SP364-201ENST00000516938 78 ntBASIC2.2□□□□□ -2.06
HMGB1P1B2RPK0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.2□□□□□ -2.06
HMGB1P1B2RPK0 HSBP1P1-201ENST00000555205 166 ntBASIC2.2□□□□□ -2.06
HMGB1P1B2RPK0 AC027807.1-201ENST00000559921 996 ntBASIC2.2□□□□□ -2.06
HMGB1P1B2RPK0 AC012493.3-201ENST00000604494 112 ntBASIC2.2□□□□□ -2.06
HMGB1P1B2RPK0 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.2□□□□□ -2.06
HMGB1P1B2RPK0 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.2□□□□□ -2.06
HMGB1P1B2RPK0 DUXAP9-208ENST00000622815 614 ntBASIC2.2□□□□□ -2.06
HMGB1P1B2RPK0 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
HMGB1P1B2RPK0 Y_RNA.126-201ENST00000363382 111 ntBASIC2.19□□□□□ -2.06
HMGB1P1B2RPK0 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.19□□□□□ -2.06
HMGB1P1B2RPK0 snoU13.30-201ENST00000458951 104 ntBASIC2.19□□□□□ -2.06
HMGB1P1B2RPK0 RNU1-98P-201ENST00000458992 160 ntBASIC2.19□□□□□ -2.06
HMGB1P1B2RPK0 SRRM1P2-201ENST00000464531 1192 ntBASIC2.19□□□□□ -2.06
HMGB1P1B2RPK0 AC010531.2-201ENST00000465012 153 ntBASIC2.19□□□□□ -2.06
HMGB1P1B2RPK0 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.19□□□□□ -2.06
HMGB1P1B2RPK0 RPL9P6-201ENST00000492764 598 ntBASIC2.19□□□□□ -2.06
HMGB1P1B2RPK0 AC234781.5-201ENST00000508429 271 ntBASIC2.19□□□□□ -2.06
HMGB1P1B2RPK0 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.19□□□□□ -2.06
HMGB1P1B2RPK0 AC064807.4-201ENST00000607201 407 ntBASIC2.19□□□□□ -2.06
HMGB1P1B2RPK0 AC046143.2-201ENST00000609789 160 ntBASIC2.19□□□□□ -2.06
HMGB1P1B2RPK0 RMST_6.1-201ENST00000611980 203 ntBASIC2.19□□□□□ -2.06
HMGB1P1B2RPK0 MIR8074-201ENST00000615081 81 ntBASIC2.19□□□□□ -2.06
HMGB1P1B2RPK0 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.19□□□□□ -2.06
HMGB1P1B2RPK0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HMGB1P1B2RPK0 RNU6-862P-201ENST00000362804 105 ntBASIC2.18□□□□□ -2.06
HMGB1P1B2RPK0 RNU6-227P-201ENST00000362865 103 ntBASIC2.18□□□□□ -2.06
HMGB1P1B2RPK0 Y_RNA.132-201ENST00000363421 102 ntBASIC2.18□□□□□ -2.06
HMGB1P1B2RPK0 RNU4-20P-201ENST00000365601 151 ntBASIC2.18□□□□□ -2.06
HMGB1P1B2RPK0 RNU6-418P-201ENST00000384035 107 ntBASIC2.18□□□□□ -2.06
HMGB1P1B2RPK0 RNU6-38P-201ENST00000384085 107 ntBASIC2.18□□□□□ -2.06
HMGB1P1B2RPK0 RNY3P9-201ENST00000384727 106 ntBASIC2.18□□□□□ -2.06
HMGB1P1B2RPK0 RNU2-52P-201ENST00000410680 190 ntBASIC2.18□□□□□ -2.06
HMGB1P1B2RPK0 TIMM9P3-201ENST00000428659 274 ntBASIC2.18□□□□□ -2.06
HMGB1P1B2RPK0 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.18□□□□□ -2.06
HMGB1P1B2RPK0 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.18□□□□□ -2.06
HMGB1P1B2RPK0 RPL23AP63-201ENST00000498752 471 ntBASIC2.18□□□□□ -2.06
HMGB1P1B2RPK0 AC091133.4-201ENST00000511142 308 ntBASIC2.18□□□□□ -2.06
HMGB1P1B2RPK0 RNU6-1041P-201ENST00000516254 102 ntBASIC2.18□□□□□ -2.06
HMGB1P1B2RPK0 AC087854.1-201ENST00000519706 414 ntBASIC2.18□□□□□ -2.06
HMGB1P1B2RPK0 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.18□□□□□ -2.06
HMGB1P1B2RPK0 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.18□□□□□ -2.06
HMGB1P1B2RPK0 DEFB131C-201ENST00000528817 165 ntBASIC2.18□□□□□ -2.06
HMGB1P1B2RPK0 AC009063.1-201ENST00000563342 702 ntBASIC2.18□□□□□ -2.06
HMGB1P1B2RPK0 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.18□□□□□ -2.06
HMGB1P1B2RPK0 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.18□□□□□ -2.06
HMGB1P1B2RPK0 MIR3198-2-201ENST00000577868 80 ntBASIC2.18□□□□□ -2.06
HMGB1P1B2RPK0 ELOCP29-201ENST00000588193 334 ntBASIC2.18□□□□□ -2.06
HMGB1P1B2RPK0 AC068205.3-201ENST00000636385 468 ntBASIC2.18□□□□□ -2.06
HMGB1P1B2RPK0 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
HMGB1P1B2RPK0 RNU6-661P-201ENST00000362409 107 ntBASIC2.17□□□□□ -2.06
HMGB1P1B2RPK0 RNU1-76P-201ENST00000362903 159 ntBASIC2.17□□□□□ -2.06
HMGB1P1B2RPK0 Y_RNA.123-201ENST00000363338 102 ntBASIC2.17□□□□□ -2.06
HMGB1P1B2RPK0 SNORA69-201ENST00000383895 132 ntBASIC2.17□□□□□ -2.06
HMGB1P1B2RPK0 MIR34B-201ENST00000385076 84 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms