Protein–RNA interactions for Protein: A6NJ46

NKX6-3, Homeobox protein Nkx-6.3, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3A6NJ46 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.09□□□□□ -2.07
NKX6-3A6NJ46 AC007336.1-201ENST00000576365 3828 ntBASIC2.09□□□□□ -2.07
NKX6-3A6NJ46 AC011712.1-201ENST00000588959 234 ntBASIC2.09□□□□□ -2.07
NKX6-3A6NJ46 MIR6840-201ENST00000611937 71 ntBASIC2.09□□□□□ -2.07
NKX6-3A6NJ46 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.09□□□□□ -2.08
NKX6-3A6NJ46 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
NKX6-3A6NJ46 CBX3P1-201ENST00000325243 554 ntBASIC2.08□□□□□ -2.08
NKX6-3A6NJ46 Y_RNA.123-201ENST00000363338 102 ntBASIC2.08□□□□□ -2.08
NKX6-3A6NJ46 RNU6-1285P-201ENST00000363480 105 ntBASIC2.08□□□□□ -2.08
NKX6-3A6NJ46 RNA5SP68-201ENST00000363885 119 ntBASIC2.08□□□□□ -2.08
NKX6-3A6NJ46 RNU6-1141P-201ENST00000364520 107 ntBASIC2.08□□□□□ -2.08
NKX6-3A6NJ46 AC003685.2-201ENST00000422795 395 ntBASIC2.08□□□□□ -2.08
NKX6-3A6NJ46 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.08□□□□□ -2.08
NKX6-3A6NJ46 IPO7P1-201ENST00000442031 636 ntBASIC2.08□□□□□ -2.08
NKX6-3A6NJ46 MTND1P11-201ENST00000456661 876 ntBASIC2.08□□□□□ -2.08
NKX6-3A6NJ46 AC130509.1-201ENST00000464158 433 ntBASIC2.08□□□□□ -2.08
NKX6-3A6NJ46 MTCO2P30-201ENST00000503662 364 ntBASIC2.08□□□□□ -2.08
NKX6-3A6NJ46 AC010486.1-201ENST00000511793 424 ntBASIC2.08□□□□□ -2.08
NKX6-3A6NJ46 RNU6-864P-201ENST00000516256 108 ntBASIC2.08□□□□□ -2.08
NKX6-3A6NJ46 RNA5SP320-201ENST00000516263 124 ntBASIC2.08□□□□□ -2.08
NKX6-3A6NJ46 AP005902.1-201ENST00000521358 186 ntBASIC2.08□□□□□ -2.08
NKX6-3A6NJ46 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.08□□□□□ -2.08
NKX6-3A6NJ46 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.08□□□□□ -2.08
NKX6-3A6NJ46 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.08□□□□□ -2.08
NKX6-3A6NJ46 AC100830.2-201ENST00000581636 240 ntBASIC2.08□□□□□ -2.08
NKX6-3A6NJ46 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.08□□□□□ -2.08
NKX6-3A6NJ46 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.08□□□□□ -2.08
NKX6-3A6NJ46 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.08□□□□□ -2.08
NKX6-3A6NJ46 AL133216.2-202ENST00000634512 349 ntBASIC2.08□□□□□ -2.08
NKX6-3A6NJ46 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
NKX6-3A6NJ46 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
NKX6-3A6NJ46 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
NKX6-3A6NJ46 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.08□□□□□ -2.08
NKX6-3A6NJ46 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
NKX6-3A6NJ46 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
NKX6-3A6NJ46 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
NKX6-3A6NJ46 RNU6-227P-201ENST00000362865 103 ntBASIC2.07□□□□□ -2.08
NKX6-3A6NJ46 RNA5SP456-201ENST00000364002 114 ntBASIC2.07□□□□□ -2.08
NKX6-3A6NJ46 RNU1-91P-201ENST00000364746 163 ntBASIC2.07□□□□□ -2.08
NKX6-3A6NJ46 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
NKX6-3A6NJ46 SNORD116-11-201ENST00000383882 92 ntBASIC2.07□□□□□ -2.08
NKX6-3A6NJ46 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
NKX6-3A6NJ46 CBX3P9-201ENST00000402326 552 ntBASIC2.07□□□□□ -2.08
NKX6-3A6NJ46 HMGB3P2-201ENST00000411913 584 ntBASIC2.07□□□□□ -2.08
NKX6-3A6NJ46 AP000275.1-201ENST00000411943 390 ntBASIC2.07□□□□□ -2.08
NKX6-3A6NJ46 IFNA20P-201ENST00000436840 528 ntBASIC2.07□□□□□ -2.08
NKX6-3A6NJ46 GPM6BP3-201ENST00000442797 145 ntBASIC2.07□□□□□ -2.08
NKX6-3A6NJ46 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.07□□□□□ -2.08
NKX6-3A6NJ46 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.07□□□□□ -2.08
NKX6-3A6NJ46 CYP2C59P-201ENST00000457790 269 ntBASIC2.07□□□□□ -2.08
NKX6-3A6NJ46 snoU13.14-201ENST00000459372 104 ntBASIC2.07□□□□□ -2.08
NKX6-3A6NJ46 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.07□□□□□ -2.08
NKX6-3A6NJ46 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.07□□□□□ -2.08
NKX6-3A6NJ46 Y_RNA.682-201ENST00000516457 100 ntBASIC2.07□□□□□ -2.08
NKX6-3A6NJ46 RNU6-965P-201ENST00000516721 96 ntBASIC2.07□□□□□ -2.08
NKX6-3A6NJ46 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.07□□□□□ -2.08
NKX6-3A6NJ46 IMMP1LP2-201ENST00000552954 492 ntBASIC2.07□□□□□ -2.08
NKX6-3A6NJ46 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.07□□□□□ -2.08
NKX6-3A6NJ46 RPS3AP23-202ENST00000574601 686 ntBASIC2.07□□□□□ -2.08
NKX6-3A6NJ46 MIR4742-201ENST00000581069 85 ntBASIC2.07□□□□□ -2.08
NKX6-3A6NJ46 VN1R107P-201ENST00000601784 209 ntBASIC2.07□□□□□ -2.08
NKX6-3A6NJ46 AL034555.1-201ENST00000604816 211 ntBASIC2.07□□□□□ -2.08
NKX6-3A6NJ46 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
NKX6-3A6NJ46 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
NKX6-3A6NJ46 RNU6-944P-201ENST00000364023 107 ntBASIC2.06□□□□□ -2.08
NKX6-3A6NJ46 RNU6-743P-201ENST00000364151 106 ntBASIC2.06□□□□□ -2.08
NKX6-3A6NJ46 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
NKX6-3A6NJ46 Y_RNA.390-201ENST00000383932 102 ntBASIC2.06□□□□□ -2.08
NKX6-3A6NJ46 RNU6-1013P-201ENST00000384180 107 ntBASIC2.06□□□□□ -2.08
NKX6-3A6NJ46 SNORA41-201ENST00000384675 132 ntBASIC2.06□□□□□ -2.08
NKX6-3A6NJ46 MT-TL1-201ENST00000386347 75 ntBASIC2.06□□□□□ -2.08
NKX6-3A6NJ46 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
NKX6-3A6NJ46 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
NKX6-3A6NJ46 SNORA12-201ENST00000391162 147 ntBASIC2.06□□□□□ -2.08
NKX6-3A6NJ46 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
NKX6-3A6NJ46 Y_RNA.597-201ENST00000410463 100 ntBASIC2.06□□□□□ -2.08
NKX6-3A6NJ46 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.06□□□□□ -2.08
NKX6-3A6NJ46 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.06□□□□□ -2.08
NKX6-3A6NJ46 PCMTD1P1-201ENST00000455560 355 ntBASIC2.06□□□□□ -2.08
NKX6-3A6NJ46 RPS29P27-201ENST00000463711 170 ntBASIC2.06□□□□□ -2.08
NKX6-3A6NJ46 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.06□□□□□ -2.08
NKX6-3A6NJ46 AC068781.1-201ENST00000488231 618 ntBASIC2.06□□□□□ -2.08
NKX6-3A6NJ46 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.06□□□□□ -2.08
NKX6-3A6NJ46 HMGB1P35-201ENST00000503360 598 ntBASIC2.06□□□□□ -2.08
NKX6-3A6NJ46 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.06□□□□□ -2.08
NKX6-3A6NJ46 RNA5SP148-201ENST00000516527 94 ntBASIC2.06□□□□□ -2.08
NKX6-3A6NJ46 AC115990.1-201ENST00000526957 301 ntBASIC2.06□□□□□ -2.08
NKX6-3A6NJ46 AC078795.3-201ENST00000602913 472 ntBASIC2.06□□□□□ -2.08
NKX6-3A6NJ46 AC008121.3-201ENST00000618726 433 ntBASIC2.06□□□□□ -2.08
NKX6-3A6NJ46 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.06□□□□□ -2.08
NKX6-3A6NJ46 AC243829.7-201ENST00000633081 225 ntBASIC2.06□□□□□ -2.08
NKX6-3A6NJ46 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.06□□□□□ -2.08
NKX6-3A6NJ46 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
NKX6-3A6NJ46 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
NKX6-3A6NJ46 AL596028.1-201ENST00000326971 197 ntBASIC2.05□□□□□ -2.08
NKX6-3A6NJ46 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.05□□□□□ -2.08
NKX6-3A6NJ46 RNU4-82P-201ENST00000362443 140 ntBASIC2.05□□□□□ -2.08
NKX6-3A6NJ46 RNA5SP240-201ENST00000365355 128 ntBASIC2.05□□□□□ -2.08
NKX6-3A6NJ46 MIR517A-201ENST00000385001 87 ntBASIC2.05□□□□□ -2.08
NKX6-3A6NJ46 AL355497.1-201ENST00000406262 551 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 277.8 ms