Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 MIR2909-201ENST00000617113 69 ntBASIC-0.86□□□□□ -2.55
LINC01549A6NIU2 DLEU2_6.2-201ENST00000620994 136 ntBASIC-0.86□□□□□ -2.55
LINC01549A6NIU2 Y_RNA.122-201ENST00000363331 96 ntBASIC-0.87□□□□□ -2.55
LINC01549A6NIU2 SNORD118-201ENST00000363593 134 ntBASIC-0.87□□□□□ -2.55
LINC01549A6NIU2 RNU6-505P-201ENST00000384427 107 ntBASIC-0.87□□□□□ -2.55
LINC01549A6NIU2 SNORD41-201ENST00000386967 70 ntBASIC-0.87□□□□□ -2.55
LINC01549A6NIU2 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC-0.87□□□□□ -2.55
LINC01549A6NIU2 RN7SKP200-201ENST00000410564 320 ntBASIC-0.87□□□□□ -2.55
LINC01549A6NIU2 ARL5AP1-201ENST00000418991 388 ntBASIC-0.87□□□□□ -2.55
LINC01549A6NIU2 AL162725.1-201ENST00000435405 301 ntBASIC-0.87□□□□□ -2.55
LINC01549A6NIU2 MTCO1P19-201ENST00000443487 500 ntBASIC-0.87□□□□□ -2.55
LINC01549A6NIU2 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.87□□□□□ -2.55
LINC01549A6NIU2 AC023194.1-201ENST00000493084 308 ntBASIC-0.87□□□□□ -2.55
LINC01549A6NIU2 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.87□□□□□ -2.55
LINC01549A6NIU2 AC092436.3-201ENST00000511788 257 ntBASIC-0.87□□□□□ -2.55
LINC01549A6NIU2 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC-0.87□□□□□ -2.55
LINC01549A6NIU2 RNU6-528P-201ENST00000516926 100 ntBASIC-0.87□□□□□ -2.55
LINC01549A6NIU2 AC027419.1-201ENST00000522976 328 ntBASIC-0.87□□□□□ -2.55
LINC01549A6NIU2 AC008127.2-201ENST00000549925 1075 ntBASIC-0.87□□□□□ -2.55
LINC01549A6NIU2 AC136618.2-201ENST00000575091 400 ntBASIC-0.87□□□□□ -2.55
LINC01549A6NIU2 AC006157.1-201ENST00000611750 366 ntBASIC-0.87□□□□□ -2.55
LINC01549A6NIU2 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.87□□□□□ -2.55
LINC01549A6NIU2 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-0.88□□□□□ -2.55
LINC01549A6NIU2 RNA5SP325-201ENST00000363756 130 ntBASIC-0.88□□□□□ -2.55
LINC01549A6NIU2 RNU6-1210P-201ENST00000363775 107 ntBASIC-0.88□□□□□ -2.55
LINC01549A6NIU2 MIR573-201ENST00000384964 99 ntBASIC-0.88□□□□□ -2.55
LINC01549A6NIU2 RNU4-27P-201ENST00000410889 139 ntBASIC-0.88□□□□□ -2.55
LINC01549A6NIU2 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.88□□□□□ -2.55
LINC01549A6NIU2 AC123900.1-201ENST00000420390 96 ntBASIC-0.88□□□□□ -2.55
LINC01549A6NIU2 AC010153.1-201ENST00000432862 727 ntBASIC-0.88□□□□□ -2.55
LINC01549A6NIU2 AC092685.1-201ENST00000447960 1243 ntBASIC-0.88□□□□□ -2.55
LINC01549A6NIU2 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.88□□□□□ -2.55
LINC01549A6NIU2 AC245047.8-201ENST00000456455 284 ntBASIC-0.88□□□□□ -2.55
LINC01549A6NIU2 TRBVB-201ENST00000477100 408 ntBASIC-0.88□□□□□ -2.55
LINC01549A6NIU2 AP000797.1-201ENST00000478870 387 ntBASIC-0.88□□□□□ -2.55
LINC01549A6NIU2 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC-0.88□□□□□ -2.55
LINC01549A6NIU2 RBBP4P6-201ENST00000508098 202 ntBASIC-0.88□□□□□ -2.55
LINC01549A6NIU2 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.88□□□□□ -2.55
LINC01549A6NIU2 MTND1P15-201ENST00000579262 949 ntBASIC-0.88□□□□□ -2.55
LINC01549A6NIU2 MIR340-201ENST00000362125 95 ntBASIC-0.89□□□□□ -2.55
LINC01549A6NIU2 MIR103A2-201ENST00000362154 78 ntBASIC-0.89□□□□□ -2.55
LINC01549A6NIU2 RNU4-41P-201ENST00000364426 143 ntBASIC-0.89□□□□□ -2.55
LINC01549A6NIU2 SNORD114-12-201ENST00000365400 75 ntBASIC-0.89□□□□□ -2.55
LINC01549A6NIU2 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.89□□□□□ -2.55
LINC01549A6NIU2 RPL31P54-201ENST00000429803 370 ntBASIC-0.89□□□□□ -2.55
LINC01549A6NIU2 FTH1P25-201ENST00000447665 469 ntBASIC-0.89□□□□□ -2.55
LINC01549A6NIU2 RNU7-56P-201ENST00000458744 62 ntBASIC-0.89□□□□□ -2.55
LINC01549A6NIU2 snoU13.21-201ENST00000459368 105 ntBASIC-0.89□□□□□ -2.55
LINC01549A6NIU2 HMGN2P26-201ENST00000463169 339 ntBASIC-0.89□□□□□ -2.55
LINC01549A6NIU2 RPL32P14-201ENST00000463196 378 ntBASIC-0.89□□□□□ -2.55
LINC01549A6NIU2 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC-0.89□□□□□ -2.55
LINC01549A6NIU2 SUMO1P1-201ENST00000497904 306 ntBASIC-0.89□□□□□ -2.55
LINC01549A6NIU2 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC-0.89□□□□□ -2.55
LINC01549A6NIU2 AL391001.1-201ENST00000602747 715 ntBASIC-0.89□□□□□ -2.55
LINC01549A6NIU2 SUGT1P1-201ENST00000379514 476 ntBASIC-0.9□□□□□ -2.55
LINC01549A6NIU2 RNU6-418P-201ENST00000384035 107 ntBASIC-0.9□□□□□ -2.55
LINC01549A6NIU2 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-0.9□□□□□ -2.55
LINC01549A6NIU2 Y_RNA.597-201ENST00000410463 100 ntBASIC-0.9□□□□□ -2.55
LINC01549A6NIU2 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC-0.9□□□□□ -2.55
LINC01549A6NIU2 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.9□□□□□ -2.55
LINC01549A6NIU2 RNU4-18P-201ENST00000516751 149 ntBASIC-0.9□□□□□ -2.55
LINC01549A6NIU2 RNA5SP268-201ENST00000516828 124 ntBASIC-0.9□□□□□ -2.55
LINC01549A6NIU2 RNU11-2P-201ENST00000516898 142 ntBASIC-0.9□□□□□ -2.55
LINC01549A6NIU2 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.9□□□□□ -2.55
LINC01549A6NIU2 AC004223.2-201ENST00000590309 544 ntBASIC-0.9□□□□□ -2.55
LINC01549A6NIU2 LINC00216-201ENST00000623548 1126 ntBASIC-0.9□□□□□ -2.55
LINC01549A6NIU2 RNA5SP432-201ENST00000362480 116 ntBASIC-0.91□□□□□ -2.56
LINC01549A6NIU2 Y_RNA.226-201ENST00000364337 114 ntBASIC-0.91□□□□□ -2.56
LINC01549A6NIU2 RNU6-534P-201ENST00000364877 106 ntBASIC-0.91□□□□□ -2.56
LINC01549A6NIU2 MTCO1P3-201ENST00000429327 192 ntBASIC-0.91□□□□□ -2.56
LINC01549A6NIU2 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC-0.91□□□□□ -2.56
LINC01549A6NIU2 AC074133.1-201ENST00000515696 183 ntBASIC-0.91□□□□□ -2.56
LINC01549A6NIU2 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.91□□□□□ -2.56
LINC01549A6NIU2 AC023827.1-201ENST00000569247 97 ntBASIC-0.91□□□□□ -2.56
LINC01549A6NIU2 AC005730.3-201ENST00000583067 366 ntBASIC-0.91□□□□□ -2.56
LINC01549A6NIU2 MIR3136-201ENST00000583498 78 ntBASIC-0.91□□□□□ -2.56
LINC01549A6NIU2 SNORA25.18-201ENST00000607153 114 ntBASIC-0.91□□□□□ -2.56
LINC01549A6NIU2 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC-0.91□□□□□ -2.56
LINC01549A6NIU2 U6.99-201ENST00000637524 83 ntBASIC-0.91□□□□□ -2.56
LINC01549A6NIU2 RNA5SP323-201ENST00000391094 133 ntBASIC-0.92□□□□□ -2.56
LINC01549A6NIU2 MIR892B-201ENST00000401279 77 ntBASIC-0.92□□□□□ -2.56
LINC01549A6NIU2 MTATP6P27-201ENST00000416987 621 ntBASIC-0.92□□□□□ -2.56
LINC01549A6NIU2 AL590632.1-201ENST00000424289 371 ntBASIC-0.92□□□□□ -2.56
LINC01549A6NIU2 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.92□□□□□ -2.56
LINC01549A6NIU2 MTCO3P45-201ENST00000443036 613 ntBASIC-0.92□□□□□ -2.56
LINC01549A6NIU2 RNU7-159P-201ENST00000459284 62 ntBASIC-0.92□□□□□ -2.56
LINC01549A6NIU2 OR9P1P-201ENST00000496431 281 ntBASIC-0.92□□□□□ -2.56
LINC01549A6NIU2 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC-0.92□□□□□ -2.56
LINC01549A6NIU2 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC-0.92□□□□□ -2.56
LINC01549A6NIU2 AP002360.4-201ENST00000606980 481 ntBASIC-0.92□□□□□ -2.56
LINC01549A6NIU2 TUG1_2.1-201ENST00000614234 87 ntBASIC-0.92□□□□□ -2.56
LINC01549A6NIU2 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC-0.93□□□□□ -2.56
LINC01549A6NIU2 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.93□□□□□ -2.56
LINC01549A6NIU2 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.93□□□□□ -2.56
LINC01549A6NIU2 RNU6-288P-201ENST00000363690 104 ntBASIC-0.93□□□□□ -2.56
LINC01549A6NIU2 MIR1827-201ENST00000408549 66 ntBASIC-0.93□□□□□ -2.56
LINC01549A6NIU2 MTCO1P21-201ENST00000416634 589 ntBASIC-0.93□□□□□ -2.56
LINC01549A6NIU2 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-0.93□□□□□ -2.56
LINC01549A6NIU2 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC-0.93□□□□□ -2.56
LINC01549A6NIU2 MTCO2P18-201ENST00000457151 658 ntBASIC-0.93□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 160.5 ms