Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AL591043.1-201ENST00000432461 424 ntBASIC1.82□□□□□ -2.12
SMIM28A0A1B0GU29 GPM6BP3-201ENST00000442797 145 ntBASIC1.82□□□□□ -2.12
SMIM28A0A1B0GU29 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.82□□□□□ -2.12
SMIM28A0A1B0GU29 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.82□□□□□ -2.12
SMIM28A0A1B0GU29 RPL39P29-201ENST00000447779 157 ntBASIC1.82□□□□□ -2.12
SMIM28A0A1B0GU29 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.82□□□□□ -2.12
SMIM28A0A1B0GU29 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.82□□□□□ -2.12
SMIM28A0A1B0GU29 RNU6-261P-201ENST00000459506 102 ntBASIC1.82□□□□□ -2.12
SMIM28A0A1B0GU29 AC009646.1-201ENST00000510455 318 ntBASIC1.82□□□□□ -2.12
SMIM28A0A1B0GU29 RNA5SP401-201ENST00000515920 127 ntBASIC1.82□□□□□ -2.12
SMIM28A0A1B0GU29 SNORA4.4-201ENST00000515921 135 ntBASIC1.82□□□□□ -2.12
SMIM28A0A1B0GU29 RNA5SP364-201ENST00000516938 78 ntBASIC1.82□□□□□ -2.12
SMIM28A0A1B0GU29 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.82□□□□□ -2.12
SMIM28A0A1B0GU29 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.82□□□□□ -2.12
SMIM28A0A1B0GU29 COPS8P3-201ENST00000526024 482 ntBASIC1.82□□□□□ -2.12
SMIM28A0A1B0GU29 CENPUP1-201ENST00000526649 1202 ntBASIC1.82□□□□□ -2.12
SMIM28A0A1B0GU29 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.82□□□□□ -2.12
SMIM28A0A1B0GU29 MIR3618-201ENST00000580330 88 ntBASIC1.82□□□□□ -2.12
SMIM28A0A1B0GU29 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.82□□□□□ -2.12
SMIM28A0A1B0GU29 AC007229.1-201ENST00000590455 412 ntBASIC1.82□□□□□ -2.12
SMIM28A0A1B0GU29 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.82□□□□□ -2.12
SMIM28A0A1B0GU29 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SMIM28A0A1B0GU29 RNU6-1085P-201ENST00000363576 107 ntBASIC1.81□□□□□ -2.12
SMIM28A0A1B0GU29 SNORA16B-201ENST00000364674 135 ntBASIC1.81□□□□□ -2.12
SMIM28A0A1B0GU29 RNA5SP240-201ENST00000365355 128 ntBASIC1.81□□□□□ -2.12
SMIM28A0A1B0GU29 SNORA25B-201ENST00000365507 128 ntBASIC1.81□□□□□ -2.12
SMIM28A0A1B0GU29 MIR514A2-201ENST00000385131 88 ntBASIC1.81□□□□□ -2.12
SMIM28A0A1B0GU29 MIR514A3-201ENST00000385132 88 ntBASIC1.81□□□□□ -2.12
SMIM28A0A1B0GU29 SNORD37.1-201ENST00000390968 65 ntBASIC1.81□□□□□ -2.12
SMIM28A0A1B0GU29 RPS29P13-201ENST00000402041 169 ntBASIC1.81□□□□□ -2.12
SMIM28A0A1B0GU29 CBX3P9-201ENST00000402326 552 ntBASIC1.81□□□□□ -2.12
SMIM28A0A1B0GU29 RNU2-48P-201ENST00000410694 191 ntBASIC1.81□□□□□ -2.12
SMIM28A0A1B0GU29 RNU6-293P-201ENST00000411259 106 ntBASIC1.81□□□□□ -2.12
SMIM28A0A1B0GU29 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.81□□□□□ -2.12
SMIM28A0A1B0GU29 SNAP23P1-201ENST00000433229 246 ntBASIC1.81□□□□□ -2.12
SMIM28A0A1B0GU29 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.81□□□□□ -2.12
SMIM28A0A1B0GU29 MTCO2P7-201ENST00000446518 666 ntBASIC1.81□□□□□ -2.12
SMIM28A0A1B0GU29 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.81□□□□□ -2.12
SMIM28A0A1B0GU29 SRRM1P2-201ENST00000464531 1192 ntBASIC1.81□□□□□ -2.12
SMIM28A0A1B0GU29 RPS27P21-201ENST00000486977 252 ntBASIC1.81□□□□□ -2.12
SMIM28A0A1B0GU29 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.81□□□□□ -2.12
SMIM28A0A1B0GU29 RPL39P5-202ENST00000512505 151 ntBASIC1.81□□□□□ -2.12
SMIM28A0A1B0GU29 RNU6-377P-201ENST00000515965 102 ntBASIC1.81□□□□□ -2.12
SMIM28A0A1B0GU29 RNU6-586P-201ENST00000517265 104 ntBASIC1.81□□□□□ -2.12
SMIM28A0A1B0GU29 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.81□□□□□ -2.12
SMIM28A0A1B0GU29 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.81□□□□□ -2.12
SMIM28A0A1B0GU29 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.81□□□□□ -2.12
SMIM28A0A1B0GU29 AC107304.1-201ENST00000604229 296 ntBASIC1.81□□□□□ -2.12
SMIM28A0A1B0GU29 RNU6-85P-201ENST00000605989 107 ntBASIC1.81□□□□□ -2.12
SMIM28A0A1B0GU29 AF250324.2-201ENST00000608299 610 ntBASIC1.81□□□□□ -2.12
SMIM28A0A1B0GU29 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
SMIM28A0A1B0GU29 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.81□□□□□ -2.12
SMIM28A0A1B0GU29 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
SMIM28A0A1B0GU29 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.8□□□□□ -2.12
SMIM28A0A1B0GU29 RNU6-1285P-201ENST00000363480 105 ntBASIC1.8□□□□□ -2.12
SMIM28A0A1B0GU29 RNU6-457P-201ENST00000363999 107 ntBASIC1.8□□□□□ -2.12
SMIM28A0A1B0GU29 SNORD32A-201ENST00000364805 84 ntBASIC1.8□□□□□ -2.12
SMIM28A0A1B0GU29 SNORD48-201ENST00000364953 64 ntBASIC1.8□□□□□ -2.12
SMIM28A0A1B0GU29 RNU4-66P-201ENST00000365199 138 ntBASIC1.8□□□□□ -2.12
SMIM28A0A1B0GU29 RNU6-1068P-201ENST00000410958 103 ntBASIC1.8□□□□□ -2.12
SMIM28A0A1B0GU29 POLHP1-201ENST00000411806 470 ntBASIC1.8□□□□□ -2.12
SMIM28A0A1B0GU29 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.8□□□□□ -2.12
SMIM28A0A1B0GU29 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.8□□□□□ -2.12
SMIM28A0A1B0GU29 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.8□□□□□ -2.12
SMIM28A0A1B0GU29 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.8□□□□□ -2.12
SMIM28A0A1B0GU29 CYP2C59P-201ENST00000457790 269 ntBASIC1.8□□□□□ -2.12
SMIM28A0A1B0GU29 TPTE2P5-203ENST00000458118 728 ntBASIC1.8□□□□□ -2.12
SMIM28A0A1B0GU29 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.8□□□□□ -2.12
SMIM28A0A1B0GU29 RN7SL274P-201ENST00000492268 272 ntBASIC1.8□□□□□ -2.12
SMIM28A0A1B0GU29 AC091874.1-201ENST00000511402 339 ntBASIC1.8□□□□□ -2.12
SMIM28A0A1B0GU29 SNORA14.1-201ENST00000516113 141 ntBASIC1.8□□□□□ -2.12
SMIM28A0A1B0GU29 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.8□□□□□ -2.12
SMIM28A0A1B0GU29 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.8□□□□□ -2.12
SMIM28A0A1B0GU29 AP005597.4-201ENST00000526762 229 ntBASIC1.8□□□□□ -2.12
SMIM28A0A1B0GU29 CBX3P4-201ENST00000538909 354 ntBASIC1.8□□□□□ -2.12
SMIM28A0A1B0GU29 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.8□□□□□ -2.12
SMIM28A0A1B0GU29 AL512360.1-201ENST00000555346 234 ntBASIC1.8□□□□□ -2.12
SMIM28A0A1B0GU29 MIR3126-201ENST00000577443 74 ntBASIC1.8□□□□□ -2.12
SMIM28A0A1B0GU29 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.8□□□□□ -2.12
SMIM28A0A1B0GU29 AP000942.3-201ENST00000603702 160 ntBASIC1.8□□□□□ -2.12
SMIM28A0A1B0GU29 AC092747.3-201ENST00000603769 301 ntBASIC1.8□□□□□ -2.12
SMIM28A0A1B0GU29 AC092807.2-201ENST00000609367 243 ntBASIC1.8□□□□□ -2.12
SMIM28A0A1B0GU29 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.8□□□□□ -2.12
SMIM28A0A1B0GU29 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.8□□□□□ -2.12
SMIM28A0A1B0GU29 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.8□□□□□ -2.12
SMIM28A0A1B0GU29 Y_RNA.140-201ENST00000363474 103 ntBASIC1.79□□□□□ -2.12
SMIM28A0A1B0GU29 RNU6-522P-201ENST00000364497 107 ntBASIC1.79□□□□□ -2.12
SMIM28A0A1B0GU29 RNU6-43P-201ENST00000384302 107 ntBASIC1.79□□□□□ -2.12
SMIM28A0A1B0GU29 MIR17-201ENST00000385012 84 ntBASIC1.79□□□□□ -2.12
SMIM28A0A1B0GU29 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.79□□□□□ -2.12
SMIM28A0A1B0GU29 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.79□□□□□ -2.12
SMIM28A0A1B0GU29 AC108667.1-201ENST00000428618 249 ntBASIC1.79□□□□□ -2.12
SMIM28A0A1B0GU29 RPS15AP10-201ENST00000432472 382 ntBASIC1.79□□□□□ -2.12
SMIM28A0A1B0GU29 AC009238.1-201ENST00000442165 424 ntBASIC1.79□□□□□ -2.12
SMIM28A0A1B0GU29 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.79□□□□□ -2.12
SMIM28A0A1B0GU29 MTND1P1-201ENST00000445453 368 ntBASIC1.79□□□□□ -2.12
SMIM28A0A1B0GU29 AC009237.6-201ENST00000446969 424 ntBASIC1.79□□□□□ -2.12
SMIM28A0A1B0GU29 RPL30P1-201ENST00000488676 339 ntBASIC1.79□□□□□ -2.12
SMIM28A0A1B0GU29 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SMIM28A0A1B0GU29 RNU5F-2P-201ENST00000516066 82 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms