Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 DBIP2-201ENST00000419076 262 ntBASIC3.51□□□□□ -1.85
CCDC163A0A0D9SF12 Z96811.1-201ENST00000445880 108 ntBASIC3.51□□□□□ -1.85
CCDC163A0A0D9SF12 AC140059.1-201ENST00000489238 361 ntBASIC3.51□□□□□ -1.85
CCDC163A0A0D9SF12 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC163A0A0D9SF12 MRPS35P2-201ENST00000508242 191 ntBASIC3.51□□□□□ -1.85
CCDC163A0A0D9SF12 FCF1P8-201ENST00000510322 597 ntBASIC3.51□□□□□ -1.85
CCDC163A0A0D9SF12 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC163A0A0D9SF12 RNU6-911P-201ENST00000516523 104 ntBASIC3.51□□□□□ -1.85
CCDC163A0A0D9SF12 IGKV2-26-201ENST00000518305 343 ntBASIC3.51□□□□□ -1.85
CCDC163A0A0D9SF12 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC163A0A0D9SF12 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC163A0A0D9SF12 UBL5P4-201ENST00000562584 236 ntBASIC3.51□□□□□ -1.85
CCDC163A0A0D9SF12 CYP4A27P-201ENST00000567218 190 ntBASIC3.51□□□□□ -1.85
CCDC163A0A0D9SF12 AL390123.1-201ENST00000603216 237 ntBASIC3.51□□□□□ -1.85
CCDC163A0A0D9SF12 AL670379.2-201ENST00000604983 252 ntBASIC3.51□□□□□ -1.85
CCDC163A0A0D9SF12 MIR6852-201ENST00000621699 66 ntBASIC3.51□□□□□ -1.85
CCDC163A0A0D9SF12 AC243829.7-201ENST00000633081 225 ntBASIC3.51□□□□□ -1.85
CCDC163A0A0D9SF12 MIR7515-201ENST00000637837 67 ntBASIC3.51□□□□□ -1.85
CCDC163A0A0D9SF12 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC163A0A0D9SF12 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC163A0A0D9SF12 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC163A0A0D9SF12 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC163A0A0D9SF12 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC163A0A0D9SF12 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC163A0A0D9SF12 Y_RNA.176-201ENST00000363815 109 ntBASIC3.5□□□□□ -1.85
CCDC163A0A0D9SF12 RNU4-50P-201ENST00000364361 141 ntBASIC3.5□□□□□ -1.85
CCDC163A0A0D9SF12 Y_RNA.380-201ENST00000365663 111 ntBASIC3.5□□□□□ -1.85
CCDC163A0A0D9SF12 RNU6-1083P-201ENST00000384022 107 ntBASIC3.5□□□□□ -1.85
CCDC163A0A0D9SF12 RNU6-574P-201ENST00000384265 107 ntBASIC3.5□□□□□ -1.85
CCDC163A0A0D9SF12 MIR1252-201ENST00000408861 65 ntBASIC3.5□□□□□ -1.85
CCDC163A0A0D9SF12 CYCSP48-201ENST00000417124 323 ntBASIC3.5□□□□□ -1.85
CCDC163A0A0D9SF12 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC163A0A0D9SF12 RPL21P2-201ENST00000440049 481 ntBASIC3.5□□□□□ -1.85
CCDC163A0A0D9SF12 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC163A0A0D9SF12 AC073901.1-201ENST00000462471 408 ntBASIC3.5□□□□□ -1.85
CCDC163A0A0D9SF12 SNORA31.26-201ENST00000517250 137 ntBASIC3.5□□□□□ -1.85
CCDC163A0A0D9SF12 AC079598.5-201ENST00000547460 117 ntBASIC3.5□□□□□ -1.85
CCDC163A0A0D9SF12 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC163A0A0D9SF12 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC163A0A0D9SF12 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.5□□□□□ -1.85
CCDC163A0A0D9SF12 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC163A0A0D9SF12 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CCDC163A0A0D9SF12 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC163A0A0D9SF12 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CCDC163A0A0D9SF12 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
CCDC163A0A0D9SF12 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC163A0A0D9SF12 Y_RNA.47-201ENST00000362697 108 ntBASIC3.49□□□□□ -1.85
CCDC163A0A0D9SF12 Y_RNA.144-201ENST00000363521 113 ntBASIC3.49□□□□□ -1.85
CCDC163A0A0D9SF12 RNU6-1210P-201ENST00000363775 107 ntBASIC3.49□□□□□ -1.85
CCDC163A0A0D9SF12 RNU6-926P-201ENST00000384075 107 ntBASIC3.49□□□□□ -1.85
CCDC163A0A0D9SF12 U8.10-201ENST00000384260 133 ntBASIC3.49□□□□□ -1.85
CCDC163A0A0D9SF12 MIR218-1-201ENST00000384999 110 ntBASIC3.49□□□□□ -1.85
CCDC163A0A0D9SF12 CBX3P9-201ENST00000402326 552 ntBASIC3.49□□□□□ -1.85
CCDC163A0A0D9SF12 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.49□□□□□ -1.85
CCDC163A0A0D9SF12 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.49□□□□□ -1.85
CCDC163A0A0D9SF12 AC146507.2-201ENST00000460608 476 ntBASIC3.49□□□□□ -1.85
CCDC163A0A0D9SF12 TRBV12-2-201ENST00000489763 344 ntBASIC3.49□□□□□ -1.85
CCDC163A0A0D9SF12 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.49□□□□□ -1.85
CCDC163A0A0D9SF12 AC093852.1-201ENST00000503587 266 ntBASIC3.49□□□□□ -1.85
CCDC163A0A0D9SF12 RNU6-1198P-201ENST00000516904 67 ntBASIC3.49□□□□□ -1.85
CCDC163A0A0D9SF12 RNU6-58P-201ENST00000517143 103 ntBASIC3.49□□□□□ -1.85
CCDC163A0A0D9SF12 EIF4BP1-201ENST00000554881 351 ntBASIC3.49□□□□□ -1.85
CCDC163A0A0D9SF12 AC103810.1-201ENST00000579873 453 ntBASIC3.49□□□□□ -1.85
CCDC163A0A0D9SF12 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.49□□□□□ -1.85
CCDC163A0A0D9SF12 U4.6-201ENST00000621618 127 ntBASIC3.49□□□□□ -1.85
CCDC163A0A0D9SF12 AC090517.3-201ENST00000625170 141 ntBASIC3.49□□□□□ -1.85
CCDC163A0A0D9SF12 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC163A0A0D9SF12 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.49□□□□□ -1.85
CCDC163A0A0D9SF12 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC163A0A0D9SF12 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC163A0A0D9SF12 AC093908.1-201ENST00000623125 8092 ntBASIC3.48□□□□□ -1.85
CCDC163A0A0D9SF12 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC163A0A0D9SF12 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC163A0A0D9SF12 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC163A0A0D9SF12 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC163A0A0D9SF12 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC163A0A0D9SF12 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CCDC163A0A0D9SF12 RNA5SP374-201ENST00000362939 125 ntBASIC3.48□□□□□ -1.85
CCDC163A0A0D9SF12 Y_RNA.149-201ENST00000363558 117 ntBASIC3.48□□□□□ -1.85
CCDC163A0A0D9SF12 RNU6-196P-201ENST00000384315 107 ntBASIC3.48□□□□□ -1.85
CCDC163A0A0D9SF12 RNU6-378P-201ENST00000384324 107 ntBASIC3.48□□□□□ -1.85
CCDC163A0A0D9SF12 SNORA26.3-201ENST00000391119 136 ntBASIC3.48□□□□□ -1.85
CCDC163A0A0D9SF12 U3.39-201ENST00000408569 239 ntBASIC3.48□□□□□ -1.85
CCDC163A0A0D9SF12 AIMP1P2-201ENST00000425294 312 ntBASIC3.48□□□□□ -1.85
CCDC163A0A0D9SF12 AC104332.2-201ENST00000429959 156 ntBASIC3.48□□□□□ -1.85
CCDC163A0A0D9SF12 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC163A0A0D9SF12 RN7SL594P-201ENST00000470590 287 ntBASIC3.48□□□□□ -1.85
CCDC163A0A0D9SF12 AL121594.1-201ENST00000475906 575 ntBASIC3.48□□□□□ -1.85
CCDC163A0A0D9SF12 RN7SL504P-201ENST00000494496 287 ntBASIC3.48□□□□□ -1.85
CCDC163A0A0D9SF12 RNA5SP112-201ENST00000515937 99 ntBASIC3.48□□□□□ -1.85
CCDC163A0A0D9SF12 RNY3P15-201ENST00000516297 97 ntBASIC3.48□□□□□ -1.85
CCDC163A0A0D9SF12 MIR2355-201ENST00000517199 87 ntBASIC3.48□□□□□ -1.85
CCDC163A0A0D9SF12 HSPE1P18-201ENST00000517602 280 ntBASIC3.48□□□□□ -1.85
CCDC163A0A0D9SF12 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.48□□□□□ -1.85
CCDC163A0A0D9SF12 COX6CP5-201ENST00000527162 228 ntBASIC3.48□□□□□ -1.85
CCDC163A0A0D9SF12 AP002404.1-201ENST00000532005 451 ntBASIC3.48□□□□□ -1.85
CCDC163A0A0D9SF12 AC027288.2-201ENST00000553028 243 ntBASIC3.48□□□□□ -1.85
CCDC163A0A0D9SF12 AL442163.3-201ENST00000554110 156 ntBASIC3.48□□□□□ -1.85
CCDC163A0A0D9SF12 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC163A0A0D9SF12 LARP7P3-201ENST00000579888 337 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms