Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 AC092106.3-201ENST00000611308 722 ntBASIC0.49□□□□□ -2.33
TRAV4A0A0B4J268 MIR6835-201ENST00000621552 64 ntBASIC0.49□□□□□ -2.33
TRAV4A0A0B4J268 AL356596.1-201ENST00000624230 379 ntBASIC0.49□□□□□ -2.33
TRAV4A0A0B4J268 MIR6767-201ENST00000637302 66 ntBASIC0.49□□□□□ -2.33
TRAV4A0A0B4J268 AC068700.1-201ENST00000565862 3754 ntBASIC0.49□□□□□ -2.33
TRAV4A0A0B4J268 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
TRAV4A0A0B4J268 SNORA63.3-201ENST00000362682 132 ntBASIC0.48□□□□□ -2.33
TRAV4A0A0B4J268 RNU4-56P-201ENST00000364700 142 ntBASIC0.48□□□□□ -2.33
TRAV4A0A0B4J268 SNORA4.2-201ENST00000365313 147 ntBASIC0.48□□□□□ -2.33
TRAV4A0A0B4J268 RPS3AP1-201ENST00000413190 320 ntBASIC0.48□□□□□ -2.33
TRAV4A0A0B4J268 RAB28P5-201ENST00000427490 651 ntBASIC0.48□□□□□ -2.33
TRAV4A0A0B4J268 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.48□□□□□ -2.33
TRAV4A0A0B4J268 MTND5P2-201ENST00000442927 1142 ntBASIC0.48□□□□□ -2.33
TRAV4A0A0B4J268 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.48□□□□□ -2.33
TRAV4A0A0B4J268 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.48□□□□□ -2.33
TRAV4A0A0B4J268 AC117454.1-201ENST00000491120 168 ntBASIC0.48□□□□□ -2.33
TRAV4A0A0B4J268 AC116353.3-201ENST00000511215 249 ntBASIC0.48□□□□□ -2.33
TRAV4A0A0B4J268 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.48□□□□□ -2.33
TRAV4A0A0B4J268 SNORA31.2-201ENST00000516019 134 ntBASIC0.48□□□□□ -2.33
TRAV4A0A0B4J268 RNU5F-4P-201ENST00000516581 114 ntBASIC0.48□□□□□ -2.33
TRAV4A0A0B4J268 AP002453.2-201ENST00000533503 320 ntBASIC0.48□□□□□ -2.33
TRAV4A0A0B4J268 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.48□□□□□ -2.33
TRAV4A0A0B4J268 AC004817.2-201ENST00000561794 651 ntBASIC0.48□□□□□ -2.33
TRAV4A0A0B4J268 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.48□□□□□ -2.33
TRAV4A0A0B4J268 AC022432.1-201ENST00000595739 310 ntBASIC0.48□□□□□ -2.33
TRAV4A0A0B4J268 AL590095.2-201ENST00000604136 117 ntBASIC0.48□□□□□ -2.33
TRAV4A0A0B4J268 AC008147.4-201ENST00000617570 1204 ntBASIC0.48□□□□□ -2.33
TRAV4A0A0B4J268 MTND4P14-201ENST00000435799 1354 ntBASIC0.47□□□□□ -2.33
TRAV4A0A0B4J268 MTND4P16-201ENST00000466108 1367 ntBASIC0.47□□□□□ -2.33
TRAV4A0A0B4J268 AC073343.1-201ENST00000328239 651 ntBASIC0.47□□□□□ -2.33
TRAV4A0A0B4J268 Y_RNA.124-201ENST00000363339 93 ntBASIC0.47□□□□□ -2.33
TRAV4A0A0B4J268 Y_RNA.132-201ENST00000363421 102 ntBASIC0.47□□□□□ -2.33
TRAV4A0A0B4J268 RNU6-1026P-201ENST00000384465 108 ntBASIC0.47□□□□□ -2.33
TRAV4A0A0B4J268 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
TRAV4A0A0B4J268 RPS3AP37-201ENST00000419176 745 ntBASIC0.47□□□□□ -2.33
TRAV4A0A0B4J268 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.47□□□□□ -2.33
TRAV4A0A0B4J268 AC010531.2-201ENST00000465012 153 ntBASIC0.47□□□□□ -2.33
TRAV4A0A0B4J268 RNU7-51P-201ENST00000516560 62 ntBASIC0.47□□□□□ -2.33
TRAV4A0A0B4J268 RN7SKP49-201ENST00000516675 260 ntBASIC0.47□□□□□ -2.33
TRAV4A0A0B4J268 SUMO2P16-201ENST00000519475 264 ntBASIC0.47□□□□□ -2.33
TRAV4A0A0B4J268 MTND2P7-201ENST00000521337 640 ntBASIC0.47□□□□□ -2.33
TRAV4A0A0B4J268 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.47□□□□□ -2.33
TRAV4A0A0B4J268 AL121579.1-201ENST00000555129 305 ntBASIC0.47□□□□□ -2.33
TRAV4A0A0B4J268 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.47□□□□□ -2.33
TRAV4A0A0B4J268 SNORA59B-202ENST00000578183 701 ntBASIC0.47□□□□□ -2.33
TRAV4A0A0B4J268 RNU6-1192P-201ENST00000612197 107 ntBASIC0.47□□□□□ -2.33
TRAV4A0A0B4J268 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.47□□□□□ -2.33
TRAV4A0A0B4J268 RNU6-489P-201ENST00000618289 107 ntBASIC0.47□□□□□ -2.33
TRAV4A0A0B4J268 AC018630.2-201ENST00000534866 2403 ntBASIC0.47□□□□□ -2.33
TRAV4A0A0B4J268 AL445523.1-201ENST00000451184 1362 ntBASIC0.46□□□□□ -2.34
TRAV4A0A0B4J268 MIR96-201ENST00000362288 78 ntBASIC0.46□□□□□ -2.34
TRAV4A0A0B4J268 Y_RNA.46-201ENST00000362695 102 ntBASIC0.46□□□□□ -2.34
TRAV4A0A0B4J268 RNU1-93P-201ENST00000364704 169 ntBASIC0.46□□□□□ -2.34
TRAV4A0A0B4J268 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
TRAV4A0A0B4J268 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.46□□□□□ -2.34
TRAV4A0A0B4J268 RPS26P5-201ENST00000418544 335 ntBASIC0.46□□□□□ -2.34
TRAV4A0A0B4J268 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.46□□□□□ -2.34
TRAV4A0A0B4J268 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.46□□□□□ -2.34
TRAV4A0A0B4J268 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.46□□□□□ -2.34
TRAV4A0A0B4J268 MTCYBP1-201ENST00000454315 1119 ntBASIC0.46□□□□□ -2.34
TRAV4A0A0B4J268 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.46□□□□□ -2.34
TRAV4A0A0B4J268 RNU1-86P-201ENST00000516108 154 ntBASIC0.46□□□□□ -2.34
TRAV4A0A0B4J268 RNU1-107P-201ENST00000516617 154 ntBASIC0.46□□□□□ -2.34
TRAV4A0A0B4J268 AP001893.2-201ENST00000526949 202 ntBASIC0.46□□□□□ -2.34
TRAV4A0A0B4J268 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.46□□□□□ -2.34
TRAV4A0A0B4J268 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.46□□□□□ -2.34
TRAV4A0A0B4J268 MIR5697-201ENST00000578045 78 ntBASIC0.46□□□□□ -2.34
TRAV4A0A0B4J268 MIR3923-201ENST00000579521 83 ntBASIC0.46□□□□□ -2.34
TRAV4A0A0B4J268 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.46□□□□□ -2.34
TRAV4A0A0B4J268 AC012507.3-201ENST00000603556 477 ntBASIC0.46□□□□□ -2.34
TRAV4A0A0B4J268 AC108747.1-201ENST00000609508 535 ntBASIC0.46□□□□□ -2.34
TRAV4A0A0B4J268 AC126177.8-201ENST00000618339 1015 ntBASIC0.46□□□□□ -2.34
TRAV4A0A0B4J268 AC006386.1-201ENST00000619436 415 ntBASIC0.46□□□□□ -2.34
TRAV4A0A0B4J268 AC097372.5-201ENST00000623665 376 ntBASIC0.46□□□□□ -2.34
TRAV4A0A0B4J268 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
TRAV4A0A0B4J268 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 AL391994.1-201ENST00000254724 282 ntBASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 RNA5SP361-201ENST00000362686 118 ntBASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 U3.9-201ENST00000363823 204 ntBASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 SNORA72.2-201ENST00000365028 127 ntBASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 MIR508-201ENST00000384857 115 ntBASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 RNU6-298P-201ENST00000390888 96 ntBASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 RNU6-1054P-201ENST00000411293 104 ntBASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 RNA5SP111-201ENST00000411386 101 ntBASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 HIGD1AP15-201ENST00000416198 280 ntBASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 AL590135.1-201ENST00000422215 156 ntBASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 AC019205.3-201ENST00000424573 156 ntBASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 ISCA1P6-201ENST00000427740 390 ntBASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 AC244670.1-201ENST00000436879 112 ntBASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 AC016700.2-201ENST00000446011 156 ntBASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 AL360271.2-201ENST00000447710 161 ntBASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 AC015911.1-201ENST00000495111 156 ntBASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 RNU6-1098P-201ENST00000516772 96 ntBASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 RNU6-856P-201ENST00000516959 98 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms