| BACE2 | Q9Y5Z0 | AP006245.1-201 | ENST00000522549 | 120 nt | BASIC | 3.69 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | UBL5P4-201 | ENST00000562584 | 236 nt | BASIC | 3.69 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | AC009779.6-201 | ENST00000603972 | 165 nt | BASIC | 3.69 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | AD001527.1-201 | ENST00000604228 | 379 nt | TSL 5 BASIC | 3.69 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | LINC01206-214 | ENST00000610910 | 456 nt | TSL 5 BASIC | 3.69 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | AL359198.2-201 | ENST00000611836 | 194 nt | BASIC | 3.69 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | MIR6076-201 | ENST00000617521 | 113 nt | BASIC | 3.69 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | FOXP2-224 | ENST00000635534 | 4290 nt | TSL 5 BASIC | 3.69 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | RBBP8P1-201 | ENST00000449447 | 1844 nt | BASIC | 3.69 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | PARP8-211 | ENST00000505554 | 3825 nt | TSL 5 BASIC | 3.69 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | ERMN-205 | ENST00000410096 | 3793 nt | APPRIS P1 TSL 1 (best) BASIC | 3.68 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | AC046195.1-201 | ENST00000518973 | 4171 nt | TSL 2 BASIC | 3.68 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | IQGAP2-202 | ENST00000379730 | 5442 nt | TSL 5 BASIC | 3.68 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | AKAP6-201 | ENST00000280979 | 15006 nt | APPRIS P1 TSL 1 (best) BASIC | 3.68 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | AC092268.1-201 | ENST00000342691 | 405 nt | BASIC | 3.68 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | RNU6-1266P-201 | ENST00000362794 | 105 nt | BASIC | 3.68 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | Y_RNA.117-201 | ENST00000363294 | 101 nt | BASIC | 3.68 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | U3.19-201 | ENST00000390893 | 196 nt | BASIC | 3.68 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | AL603908.1-201 | ENST00000406098 | 201 nt | BASIC | 3.68 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | RNU6-1001P-201 | ENST00000411265 | 100 nt | BASIC | 3.68 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | AC006989.1-201 | ENST00000427212 | 131 nt | BASIC | 3.68 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | AC078809.1-201 | ENST00000427601 | 140 nt | BASIC | 3.68 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | AC017083.1-201 | ENST00000428093 | 483 nt | BASIC | 3.68 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | AL445305.1-201 | ENST00000432577 | 575 nt | BASIC | 3.68 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | AC005002.2-201 | ENST00000438228 | 269 nt | BASIC | 3.68 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | RPL39P29-201 | ENST00000447779 | 157 nt | BASIC | 3.68 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | snoU13.6-201 | ENST00000458785 | 104 nt | BASIC | 3.68 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | AC012081.1-201 | ENST00000462382 | 477 nt | TSL 3 BASIC | 3.68 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | RPL30P12-201 | ENST00000474666 | 353 nt | BASIC | 3.68 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | RPL30P14-201 | ENST00000482744 | 348 nt | BASIC | 3.68 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | AKIRIN2P1-201 | ENST00000505898 | 352 nt | BASIC | 3.68 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | SNORA70.14-201 | ENST00000516205 | 110 nt | BASIC | 3.68 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | RNU5B-3P-201 | ENST00000516601 | 115 nt | BASIC | 3.68 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | AC022080.3-201 | ENST00000544433 | 482 nt | BASIC | 3.68 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | MDM2-232 | ENST00000544561 | 213 nt | TSL 5 BASIC | 3.68 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | POC1B-211 | ENST00000549504 | 581 nt | TSL 5 BASIC | 3.68 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | AC021231.3-201 | ENST00000558497 | 370 nt | BASIC | 3.68 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | AL133383.1-201 | ENST00000569292 | 901 nt | TSL 1 (best) BASIC | 3.68 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | AC090897.2-201 | ENST00000581715 | 130 nt | BASIC | 3.68 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | AL138963.2-201 | ENST00000605137 | 226 nt | BASIC | 3.68 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | YPEL5P2-201 | ENST00000605553 | 359 nt | BASIC | 3.68 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | MIR486-1-201 | ENST00000612171 | 68 nt | BASIC | 3.68 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | ADGRL4-201 | ENST00000370742 | 3527 nt | APPRIS P1 TSL 1 (best) BASIC | 3.68 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | KCNJ16-209 | ENST00000589377 | 3684 nt | APPRIS P1 TSL 5 BASIC | 3.68 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | OTUD4P1-201 | ENST00000237841 | 3067 nt | BASIC | 3.67 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | FAM126A-204 | ENST00000432176 | 13177 nt | APPRIS P1 TSL 1 (best) BASIC | 3.67 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | Y_RNA.65-201 | ENST00000362846 | 100 nt | BASIC | 3.67 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | RNU6-137P-201 | ENST00000363680 | 108 nt | BASIC | 3.67 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | Y_RNA.277-201 | ENST00000364754 | 102 nt | BASIC | 3.67 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | RNU6-290P-201 | ENST00000365212 | 101 nt | BASIC | 3.67 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | RNU6-487P-201 | ENST00000365430 | 104 nt | BASIC | 3.67 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | SNORD63-201 | ENST00000384262 | 68 nt | BASIC | 3.67 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | RNU6-622P-201 | ENST00000384272 | 103 nt | BASIC | 3.67 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | RNU6-159P-201 | ENST00000391080 | 106 nt | BASIC | 3.67 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | AL159169.1-201 | ENST00000421119 | 127 nt | BASIC | 3.67 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | AL161651.1-201 | ENST00000440882 | 223 nt | BASIC | 3.67 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | HSPE1P25-201 | ENST00000455484 | 251 nt | BASIC | 3.67 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | FCF1P8-201 | ENST00000510322 | 597 nt | BASIC | 3.67 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | RN7SKP49-201 | ENST00000516675 | 260 nt | BASIC | 3.67 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | RNU6-58P-201 | ENST00000517143 | 103 nt | BASIC | 3.67 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | RN7SKP57-201 | ENST00000517248 | 293 nt | BASIC | 3.67 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | AP000873.2-206 | ENST00000529811 | 429 nt | TSL 2 BASIC | 3.67 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | MAPK1-204 | ENST00000544786 | 951 nt | TSL 1 (best) BASIC | 3.67 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | AC104971.4-201 | ENST00000622763 | 249 nt | TSL 5 BASIC | 3.67 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | OR8K3-203 | ENST00000641662 | 2438 nt | APPRIS P1 BASIC | 3.67 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | CFHR4-202 | ENST00000367416 | 2178 nt | APPRIS P1 TSL 2 BASIC | 3.67 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | SLC9C1-205 | ENST00000487372 | 3979 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.67 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | AL079305.1-201 | ENST00000623159 | 3008 nt | BASIC | 3.67 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | BIRC3-201 | ENST00000263464 | 5197 nt | APPRIS P1 TSL 1 (best) BASIC | 3.67 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | MBNL1-220 | ENST00000493459 | 4205 nt | TSL 1 (best) BASIC | 3.66 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | EMSY-210 | ENST00000529032 | 6848 nt | APPRIS P3 TSL 1 (best) BASIC | 3.66 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | CATSPERB-201 | ENST00000256343 | 3623 nt | APPRIS P2 TSL 1 (best) BASIC | 3.66 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | RTTN-201 | ENST00000255674 | 6960 nt | TSL 5 BASIC | 3.66 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | RAPGEF6-210 | ENST00000512052 | 3535 nt | TSL 2 BASIC | 3.66 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | RNU4-90P-201 | ENST00000362773 | 141 nt | BASIC | 3.66 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | RNU6-1159P-201 | ENST00000362933 | 107 nt | BASIC | 3.66 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | RNU6-281P-201 | ENST00000384212 | 103 nt | BASIC | 3.66 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | RNA5SP390-201 | ENST00000410191 | 113 nt | BASIC | 3.66 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | RNU2-14P-201 | ENST00000411053 | 191 nt | BASIC | 3.66 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | ATP6V0E1P4-201 | ENST00000427294 | 242 nt | BASIC | 3.66 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | RN7SKP83-201 | ENST00000516512 | 178 nt | BASIC | 3.66 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | AC130289.1-201 | ENST00000577321 | 73 nt | BASIC | 3.66 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | AC022809.1-201 | ENST00000579247 | 428 nt | TSL 3 BASIC | 3.66 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | AL683887.1-201 | ENST00000603401 | 287 nt | TSL 3 BASIC | 3.66 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | BX284668.6-201 | ENST00000606899 | 438 nt | BASIC | 3.66 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | AC098479.1-201 | ENST00000609225 | 154 nt | BASIC | 3.66 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | U7.8-201 | ENST00000619968 | 63 nt | BASIC | 3.66 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | RNF17-201 | ENST00000255324 | 5119 nt | APPRIS P1 TSL 2 BASIC | 3.66 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | HTR2B-201 | ENST00000258400 | 2246 nt | APPRIS P1 TSL 1 (best) BASIC | 3.66 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | TAB3-203 | ENST00000378930 | 6255 nt | APPRIS P1 TSL 1 (best) BASIC | 3.66 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | LTN1-207 | ENST00000614971 | 7756 nt | TSL 1 (best) BASIC | 3.66 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | WDR49-201 | ENST00000308378 | 2594 nt | APPRIS P2 TSL 1 (best) BASIC | 3.65 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | POLK-201 | ENST00000241436 | 5911 nt | APPRIS P1 TSL 1 (best) BASIC | 3.65 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | ADAT2-203 | ENST00000606514 | 6651 nt | TSL 1 (best) BASIC | 3.65 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | AC087521.2-201 | ENST00000499066 | 2190 nt | TSL 2 BASIC | 3.65 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | LINC01938-201 | ENST00000521341 | 1864 nt | TSL 2 BASIC | 3.65 | □□□□□ -1.82 | | |
| BACE2 | Q9Y5Z0 | RNU6-1285P-201 | ENST00000363480 | 105 nt | BASIC | 3.65 | □□□□□ -1.83 | | |
| BACE2 | Q9Y5Z0 | SNORA38.1-201 | ENST00000364172 | 131 nt | BASIC | 3.65 | □□□□□ -1.83 | | |
| BACE2 | Q9Y5Z0 | SNORD58.1-201 | ENST00000391313 | 66 nt | BASIC | 3.65 | □□□□□ -1.83 | | |
| BACE2 | Q9Y5Z0 | RNU6ATAC10P-201 | ENST00000408635 | 111 nt | BASIC | 3.65 | □□□□□ -1.83 | | |