Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 RNU6-331P-201ENST00000384724 107 ntBASIC2.67□□□□□ -1.98
CLDN16Q9Y5I7 NDUFB4P4-201ENST00000404822 243 ntBASIC2.67□□□□□ -1.98
CLDN16Q9Y5I7 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.67□□□□□ -1.98
CLDN16Q9Y5I7 USMG5P1-201ENST00000425964 177 ntBASIC2.67□□□□□ -1.98
CLDN16Q9Y5I7 GPM6BP3-201ENST00000442797 145 ntBASIC2.67□□□□□ -1.98
CLDN16Q9Y5I7 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.67□□□□□ -1.98
CLDN16Q9Y5I7 AC016632.1-201ENST00000503994 196 ntBASIC2.67□□□□□ -1.98
CLDN16Q9Y5I7 AC091874.1-201ENST00000511402 339 ntBASIC2.67□□□□□ -1.98
CLDN16Q9Y5I7 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.67□□□□□ -1.98
CLDN16Q9Y5I7 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.67□□□□□ -1.98
CLDN16Q9Y5I7 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.67□□□□□ -1.98
CLDN16Q9Y5I7 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.67□□□□□ -1.98
CLDN16Q9Y5I7 MIR3199-1-201ENST00000582434 88 ntBASIC2.67□□□□□ -1.98
CLDN16Q9Y5I7 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.67□□□□□ -1.98
CLDN16Q9Y5I7 AL359198.2-201ENST00000611836 194 ntBASIC2.67□□□□□ -1.98
CLDN16Q9Y5I7 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.67□□□□□ -1.98
CLDN16Q9Y5I7 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
CLDN16Q9Y5I7 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.67□□□□□ -1.98
CLDN16Q9Y5I7 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.67□□□□□ -1.98
CLDN16Q9Y5I7 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
CLDN16Q9Y5I7 RNU6-596P-201ENST00000365395 98 ntBASIC2.66□□□□□ -1.98
CLDN16Q9Y5I7 Y_RNA.460-201ENST00000384255 102 ntBASIC2.66□□□□□ -1.98
CLDN16Q9Y5I7 RNU1-57P-201ENST00000384491 166 ntBASIC2.66□□□□□ -1.98
CLDN16Q9Y5I7 SNORD116-29-201ENST00000384516 83 ntBASIC2.66□□□□□ -1.98
CLDN16Q9Y5I7 MIR186-201ENST00000384988 86 ntBASIC2.66□□□□□ -1.98
CLDN16Q9Y5I7 AL591034.2-201ENST00000402839 359 ntBASIC2.66□□□□□ -1.98
CLDN16Q9Y5I7 RNU6-174P-201ENST00000410406 106 ntBASIC2.66□□□□□ -1.98
CLDN16Q9Y5I7 Y_RNA.646-201ENST00000410980 101 ntBASIC2.66□□□□□ -1.98
CLDN16Q9Y5I7 EIF1AXP1-201ENST00000419267 435 ntBASIC2.66□□□□□ -1.98
CLDN16Q9Y5I7 BX276092.3-201ENST00000424182 230 ntBASIC2.66□□□□□ -1.98
CLDN16Q9Y5I7 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.66□□□□□ -1.98
CLDN16Q9Y5I7 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.66□□□□□ -1.98
CLDN16Q9Y5I7 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.66□□□□□ -1.98
CLDN16Q9Y5I7 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.66□□□□□ -1.98
CLDN16Q9Y5I7 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.66□□□□□ -1.98
CLDN16Q9Y5I7 AP004217.1-201ENST00000480579 346 ntBASIC2.66□□□□□ -1.98
CLDN16Q9Y5I7 AC097473.1-201ENST00000508142 408 ntBASIC2.66□□□□□ -1.98
CLDN16Q9Y5I7 RN7SKP132-201ENST00000516001 208 ntBASIC2.66□□□□□ -1.98
CLDN16Q9Y5I7 AC109329.1-201ENST00000518744 317 ntBASIC2.66□□□□□ -1.98
CLDN16Q9Y5I7 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.66□□□□□ -1.98
CLDN16Q9Y5I7 AC107016.2-201ENST00000547968 190 ntBASIC2.66□□□□□ -1.98
CLDN16Q9Y5I7 AC005899.2-201ENST00000584353 90 ntBASIC2.66□□□□□ -1.98
CLDN16Q9Y5I7 AC090115.4-201ENST00000609970 188 ntBASIC2.66□□□□□ -1.98
CLDN16Q9Y5I7 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.66□□□□□ -1.98
CLDN16Q9Y5I7 AC092608.2-201ENST00000624427 218 ntBASIC2.66□□□□□ -1.98
CLDN16Q9Y5I7 AL137790.1-201ENST00000634283 177 ntBASIC2.66□□□□□ -1.98
CLDN16Q9Y5I7 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CLDN16Q9Y5I7 MTND5P19-201ENST00000424872 1794 ntBASIC2.66□□□□□ -1.98
CLDN16Q9Y5I7 MTND5P9-201ENST00000503854 1755 ntBASIC2.66□□□□□ -1.98
CLDN16Q9Y5I7 AC006026.1-201ENST00000444025 1803 ntBASIC2.65□□□□□ -1.98
CLDN16Q9Y5I7 MTND4P27-201ENST00000450813 1354 ntBASIC2.65□□□□□ -1.98
CLDN16Q9Y5I7 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CLDN16Q9Y5I7 RNU6-655P-201ENST00000362858 107 ntBASIC2.65□□□□□ -1.99
CLDN16Q9Y5I7 Y_RNA.419-201ENST00000384041 102 ntBASIC2.65□□□□□ -1.99
CLDN16Q9Y5I7 RNU6-968P-201ENST00000384076 107 ntBASIC2.65□□□□□ -1.99
CLDN16Q9Y5I7 AL590135.1-201ENST00000422215 156 ntBASIC2.65□□□□□ -1.99
CLDN16Q9Y5I7 EIF4EP2-201ENST00000422816 654 ntBASIC2.65□□□□□ -1.99
CLDN16Q9Y5I7 AC019205.3-201ENST00000424573 156 ntBASIC2.65□□□□□ -1.99
CLDN16Q9Y5I7 MTND4P28-201ENST00000426217 387 ntBASIC2.65□□□□□ -1.99
CLDN16Q9Y5I7 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.65□□□□□ -1.99
CLDN16Q9Y5I7 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.65□□□□□ -1.99
CLDN16Q9Y5I7 AC016700.2-201ENST00000446011 156 ntBASIC2.65□□□□□ -1.99
CLDN16Q9Y5I7 AL353705.4-201ENST00000449661 238 ntBASIC2.65□□□□□ -1.99
CLDN16Q9Y5I7 AC073901.1-201ENST00000462471 408 ntBASIC2.65□□□□□ -1.99
CLDN16Q9Y5I7 RN7SL499P-201ENST00000481141 276 ntBASIC2.65□□□□□ -1.99
CLDN16Q9Y5I7 AC140059.1-201ENST00000489238 361 ntBASIC2.65□□□□□ -1.99
CLDN16Q9Y5I7 AC015911.1-201ENST00000495111 156 ntBASIC2.65□□□□□ -1.99
CLDN16Q9Y5I7 HMGN1P13-201ENST00000505795 138 ntBASIC2.65□□□□□ -1.99
CLDN16Q9Y5I7 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.65□□□□□ -1.99
CLDN16Q9Y5I7 RNU2-53P-201ENST00000516257 147 ntBASIC2.65□□□□□ -1.99
CLDN16Q9Y5I7 SCARNA16.2-201ENST00000516520 172 ntBASIC2.65□□□□□ -1.99
CLDN16Q9Y5I7 RNA5SP384-201ENST00000516615 116 ntBASIC2.65□□□□□ -1.99
CLDN16Q9Y5I7 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CLDN16Q9Y5I7 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.65□□□□□ -1.99
CLDN16Q9Y5I7 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.65□□□□□ -1.99
CLDN16Q9Y5I7 RPL12P50-201ENST00000603116 116 ntBASIC2.65□□□□□ -1.99
CLDN16Q9Y5I7 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.65□□□□□ -1.99
CLDN16Q9Y5I7 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
CLDN16Q9Y5I7 AC092593.1-201ENST00000515413 1815 ntBASIC2.65□□□□□ -1.99
CLDN16Q9Y5I7 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CLDN16Q9Y5I7 AC233981.2-201ENST00000611524 1614 ntBASIC2.64□□□□□ -1.99
CLDN16Q9Y5I7 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.64□□□□□ -1.99
CLDN16Q9Y5I7 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CLDN16Q9Y5I7 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CLDN16Q9Y5I7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.64□□□□□ -1.99
CLDN16Q9Y5I7 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
CLDN16Q9Y5I7 SNORD50.1-201ENST00000362987 71 ntBASIC2.64□□□□□ -1.99
CLDN16Q9Y5I7 RNU4-56P-201ENST00000364700 142 ntBASIC2.64□□□□□ -1.99
CLDN16Q9Y5I7 RNU6-784P-201ENST00000384330 106 ntBASIC2.64□□□□□ -1.99
CLDN16Q9Y5I7 Y_RNA.533-201ENST00000384596 114 ntBASIC2.64□□□□□ -1.99
CLDN16Q9Y5I7 RNU6-1328P-201ENST00000410938 106 ntBASIC2.64□□□□□ -1.99
CLDN16Q9Y5I7 AL451074.5-201ENST00000415894 435 ntBASIC2.64□□□□□ -1.99
CLDN16Q9Y5I7 RPL23AP95-201ENST00000426806 265 ntBASIC2.64□□□□□ -1.99
CLDN16Q9Y5I7 AC078809.1-201ENST00000427601 140 ntBASIC2.64□□□□□ -1.99
CLDN16Q9Y5I7 AC022018.1-201ENST00000430685 241 ntBASIC2.64□□□□□ -1.99
CLDN16Q9Y5I7 MTCO3P10-201ENST00000455912 772 ntBASIC2.64□□□□□ -1.99
CLDN16Q9Y5I7 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.64□□□□□ -1.99
CLDN16Q9Y5I7 RNU7-26P-201ENST00000458980 63 ntBASIC2.64□□□□□ -1.99
CLDN16Q9Y5I7 AC023141.11-201ENST00000508864 202 ntBASIC2.64□□□□□ -1.99
CLDN16Q9Y5I7 AC091826.1-201ENST00000514065 313 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms