Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 RNY1P7-201ENST00000384743 110 ntBASIC4.67□□□□□ -1.66
PCDHB3Q9Y5E6 AC114755.2-201ENST00000413520 361 ntBASIC4.67□□□□□ -1.66
PCDHB3Q9Y5E6 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHB3Q9Y5E6 AC091390.1-201ENST00000433904 331 ntBASIC4.67□□□□□ -1.66
PCDHB3Q9Y5E6 RNU1-104P-201ENST00000517280 175 ntBASIC4.67□□□□□ -1.66
PCDHB3Q9Y5E6 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.67□□□□□ -1.66
PCDHB3Q9Y5E6 AC024220.1-201ENST00000603675 484 ntBASIC4.67□□□□□ -1.66
PCDHB3Q9Y5E6 AC008745.1-201ENST00000604064 271 ntBASIC4.67□□□□□ -1.66
PCDHB3Q9Y5E6 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.67□□□□□ -1.66
PCDHB3Q9Y5E6 AC093732.2-201ENST00000607950 274 ntBASIC4.67□□□□□ -1.66
PCDHB3Q9Y5E6 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB3Q9Y5E6 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB3Q9Y5E6 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB3Q9Y5E6 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHB3Q9Y5E6 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB3Q9Y5E6 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB3Q9Y5E6 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHB3Q9Y5E6 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PCDHB3Q9Y5E6 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PCDHB3Q9Y5E6 AC010733.2-201ENST00000589496 5702 ntBASIC4.66□□□□□ -1.66
PCDHB3Q9Y5E6 RNU6-1113P-201ENST00000384348 107 ntBASIC4.66□□□□□ -1.66
PCDHB3Q9Y5E6 MIR29B2-201ENST00000385055 81 ntBASIC4.66□□□□□ -1.66
PCDHB3Q9Y5E6 PPIAP31-201ENST00000405422 495 ntBASIC4.66□□□□□ -1.66
PCDHB3Q9Y5E6 AL355796.1-201ENST00000406706 323 ntBASIC4.66□□□□□ -1.66
PCDHB3Q9Y5E6 CALM2P4-201ENST00000430810 426 ntBASIC4.66□□□□□ -1.66
PCDHB3Q9Y5E6 AL121890.1-201ENST00000435457 205 ntBASIC4.66□□□□□ -1.66
PCDHB3Q9Y5E6 AC109327.2-201ENST00000448339 378 ntBASIC4.66□□□□□ -1.66
PCDHB3Q9Y5E6 snoU13.1-201ENST00000459157 104 ntBASIC4.66□□□□□ -1.66
PCDHB3Q9Y5E6 AC010469.1-201ENST00000463864 576 ntBASIC4.66□□□□□ -1.66
PCDHB3Q9Y5E6 RPL39P34-201ENST00000477141 156 ntBASIC4.66□□□□□ -1.66
PCDHB3Q9Y5E6 S100A11P1-201ENST00000477525 312 ntBASIC4.66□□□□□ -1.66
PCDHB3Q9Y5E6 SNORA18.4-201ENST00000516440 124 ntBASIC4.66□□□□□ -1.66
PCDHB3Q9Y5E6 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.66□□□□□ -1.66
PCDHB3Q9Y5E6 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDHB3Q9Y5E6 MAPK10-320ENST00000641462 6696 ntBASIC4.66□□□□□ -1.66
PCDHB3Q9Y5E6 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHB3Q9Y5E6 RNU6-529P-201ENST00000363383 104 ntBASIC4.65□□□□□ -1.67
PCDHB3Q9Y5E6 RNU6-820P-201ENST00000384273 107 ntBASIC4.65□□□□□ -1.67
PCDHB3Q9Y5E6 AL445584.1-201ENST00000431451 330 ntBASIC4.65□□□□□ -1.67
PCDHB3Q9Y5E6 MTATP6P21-201ENST00000440681 189 ntBASIC4.65□□□□□ -1.67
PCDHB3Q9Y5E6 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDHB3Q9Y5E6 SNORD108-201ENST00000459332 71 ntBASIC4.65□□□□□ -1.67
PCDHB3Q9Y5E6 RNU6-1073P-201ENST00000517182 106 ntBASIC4.65□□□□□ -1.67
PCDHB3Q9Y5E6 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.65□□□□□ -1.67
PCDHB3Q9Y5E6 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.65□□□□□ -1.67
PCDHB3Q9Y5E6 AP001880.2-201ENST00000538233 448 ntBASIC4.65□□□□□ -1.67
PCDHB3Q9Y5E6 HSPE1P5-201ENST00000561489 272 ntBASIC4.65□□□□□ -1.67
PCDHB3Q9Y5E6 RNU6-94P-201ENST00000607728 107 ntBASIC4.65□□□□□ -1.67
PCDHB3Q9Y5E6 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHB3Q9Y5E6 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
PCDHB3Q9Y5E6 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHB3Q9Y5E6 AL672167.1-203ENST00000641299 2975 ntBASIC4.65□□□□□ -1.67
PCDHB3Q9Y5E6 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHB3Q9Y5E6 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHB3Q9Y5E6 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHB3Q9Y5E6 AL136360.1-201ENST00000503377 1900 ntBASIC4.64□□□□□ -1.67
PCDHB3Q9Y5E6 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHB3Q9Y5E6 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHB3Q9Y5E6 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDHB3Q9Y5E6 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHB3Q9Y5E6 RNA5SP191-201ENST00000362585 102 ntBASIC4.64□□□□□ -1.67
PCDHB3Q9Y5E6 Y_RNA.220-201ENST00000364244 109 ntBASIC4.64□□□□□ -1.67
PCDHB3Q9Y5E6 MIR195-201ENST00000385194 87 ntBASIC4.64□□□□□ -1.67
PCDHB3Q9Y5E6 MIR624-201ENST00000385217 97 ntBASIC4.64□□□□□ -1.67
PCDHB3Q9Y5E6 SNORD78.1-201ENST00000390866 65 ntBASIC4.64□□□□□ -1.67
PCDHB3Q9Y5E6 RNA5SP127-201ENST00000411051 133 ntBASIC4.64□□□□□ -1.67
PCDHB3Q9Y5E6 AL645939.1-201ENST00000453429 797 ntBASIC4.64□□□□□ -1.67
PCDHB3Q9Y5E6 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDHB3Q9Y5E6 AC145146.1-201ENST00000496370 254 ntBASIC4.64□□□□□ -1.67
PCDHB3Q9Y5E6 SNORD77.4-201ENST00000516158 81 ntBASIC4.64□□□□□ -1.67
PCDHB3Q9Y5E6 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHB3Q9Y5E6 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDHB3Q9Y5E6 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHB3Q9Y5E6 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHB3Q9Y5E6 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.64□□□□□ -1.67
PCDHB3Q9Y5E6 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.64□□□□□ -1.67
PCDHB3Q9Y5E6 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
PCDHB3Q9Y5E6 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.63□□□□□ -1.67
PCDHB3Q9Y5E6 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHB3Q9Y5E6 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHB3Q9Y5E6 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.63□□□□□ -1.67
PCDHB3Q9Y5E6 RNU6-1305P-201ENST00000364353 104 ntBASIC4.63□□□□□ -1.67
PCDHB3Q9Y5E6 Y_RNA.323-201ENST00000365157 109 ntBASIC4.63□□□□□ -1.67
PCDHB3Q9Y5E6 RNU6-1152P-201ENST00000384576 107 ntBASIC4.63□□□□□ -1.67
PCDHB3Q9Y5E6 MIR450A2-201ENST00000385022 100 ntBASIC4.63□□□□□ -1.67
PCDHB3Q9Y5E6 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
PCDHB3Q9Y5E6 MIR1185-2-201ENST00000408687 86 ntBASIC4.63□□□□□ -1.67
PCDHB3Q9Y5E6 RNU2-32P-201ENST00000411193 191 ntBASIC4.63□□□□□ -1.67
PCDHB3Q9Y5E6 AF228730.3-201ENST00000436691 102 ntBASIC4.63□□□□□ -1.67
PCDHB3Q9Y5E6 RPS26P55-201ENST00000471178 356 ntBASIC4.63□□□□□ -1.67
PCDHB3Q9Y5E6 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.63□□□□□ -1.67
PCDHB3Q9Y5E6 RNA5SP392-201ENST00000516905 112 ntBASIC4.63□□□□□ -1.67
PCDHB3Q9Y5E6 AC105245.1-201ENST00000581934 244 ntBASIC4.63□□□□□ -1.67
PCDHB3Q9Y5E6 AL035470.1-201ENST00000622571 220 ntBASIC4.63□□□□□ -1.67
PCDHB3Q9Y5E6 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.63□□□□□ -1.67
PCDHB3Q9Y5E6 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHB3Q9Y5E6 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHB3Q9Y5E6 AC006971.1-201ENST00000407916 4486 ntBASIC4.63□□□□□ -1.67
PCDHB3Q9Y5E6 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHB3Q9Y5E6 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms