Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.83□□□□□ -2.28
HHLA3Q9XRX5 AC100821.1-201ENST00000523153 2479 ntBASIC0.82□□□□□ -2.28
HHLA3Q9XRX5 AC233981.2-201ENST00000611524 1614 ntBASIC0.82□□□□□ -2.28
HHLA3Q9XRX5 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
HHLA3Q9XRX5 SNORD113-6-201ENST00000363345 75 ntBASIC0.82□□□□□ -2.28
HHLA3Q9XRX5 SNORA22-201ENST00000383907 134 ntBASIC0.82□□□□□ -2.28
HHLA3Q9XRX5 RNU6-142P-201ENST00000384019 107 ntBASIC0.82□□□□□ -2.28
HHLA3Q9XRX5 RNU6-43P-201ENST00000384302 107 ntBASIC0.82□□□□□ -2.28
HHLA3Q9XRX5 RNU6-692P-201ENST00000384496 107 ntBASIC0.82□□□□□ -2.28
HHLA3Q9XRX5 SNORA22C-201ENST00000384614 134 ntBASIC0.82□□□□□ -2.28
HHLA3Q9XRX5 MTCO3P41-201ENST00000414801 328 ntBASIC0.82□□□□□ -2.28
HHLA3Q9XRX5 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.82□□□□□ -2.28
HHLA3Q9XRX5 TOMM22P2-201ENST00000430735 237 ntBASIC0.82□□□□□ -2.28
HHLA3Q9XRX5 AL365184.2-201ENST00000431139 435 ntBASIC0.82□□□□□ -2.28
HHLA3Q9XRX5 AC245047.4-201ENST00000433189 144 ntBASIC0.82□□□□□ -2.28
HHLA3Q9XRX5 MTATP6P16-201ENST00000434543 526 ntBASIC0.82□□□□□ -2.28
HHLA3Q9XRX5 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.82□□□□□ -2.28
HHLA3Q9XRX5 OR2AQ1P-201ENST00000451972 200 ntBASIC0.82□□□□□ -2.28
HHLA3Q9XRX5 SNRPFP4-201ENST00000456366 242 ntBASIC0.82□□□□□ -2.28
HHLA3Q9XRX5 SNORA31.16-201ENST00000516773 139 ntBASIC0.82□□□□□ -2.28
HHLA3Q9XRX5 AC022616.3-201ENST00000523940 148 ntBASIC0.82□□□□□ -2.28
HHLA3Q9XRX5 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.82□□□□□ -2.28
HHLA3Q9XRX5 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.82□□□□□ -2.28
HHLA3Q9XRX5 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.82□□□□□ -2.28
HHLA3Q9XRX5 AC012507.3-201ENST00000603556 477 ntBASIC0.82□□□□□ -2.28
HHLA3Q9XRX5 AL359999.1-201ENST00000604513 294 ntBASIC0.82□□□□□ -2.28
HHLA3Q9XRX5 AL451064.1-201ENST00000607718 471 ntBASIC0.82□□□□□ -2.28
HHLA3Q9XRX5 AC138749.5-201ENST00000611461 208 ntBASIC0.82□□□□□ -2.28
HHLA3Q9XRX5 AL078604.3-201ENST00000615580 211 ntBASIC0.82□□□□□ -2.28
HHLA3Q9XRX5 AC116165.2-201ENST00000616705 206 ntBASIC0.82□□□□□ -2.28
HHLA3Q9XRX5 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.81□□□□□ -2.28
HHLA3Q9XRX5 RNU6-501P-201ENST00000364072 100 ntBASIC0.81□□□□□ -2.28
HHLA3Q9XRX5 SNORA25.8-201ENST00000364831 128 ntBASIC0.81□□□□□ -2.28
HHLA3Q9XRX5 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.81□□□□□ -2.28
HHLA3Q9XRX5 Y_RNA.576-201ENST00000384781 102 ntBASIC0.81□□□□□ -2.28
HHLA3Q9XRX5 MIR513B-201ENST00000385136 84 ntBASIC0.81□□□□□ -2.28
HHLA3Q9XRX5 RNU6-360P-201ENST00000390944 104 ntBASIC0.81□□□□□ -2.28
HHLA3Q9XRX5 MRPL42P2-201ENST00000403169 426 ntBASIC0.81□□□□□ -2.28
HHLA3Q9XRX5 OR6C66P-201ENST00000414917 930 ntBASIC0.81□□□□□ -2.28
HHLA3Q9XRX5 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.81□□□□□ -2.28
HHLA3Q9XRX5 AC004854.1-201ENST00000440356 349 ntBASIC0.81□□□□□ -2.28
HHLA3Q9XRX5 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.81□□□□□ -2.28
HHLA3Q9XRX5 RPL9P9-202ENST00000466501 579 ntBASIC0.81□□□□□ -2.28
HHLA3Q9XRX5 SNRPGP7-201ENST00000469016 106 ntBASIC0.81□□□□□ -2.28
HHLA3Q9XRX5 OR2A41P-201ENST00000473586 105 ntBASIC0.81□□□□□ -2.28
HHLA3Q9XRX5 AC093852.1-201ENST00000503587 266 ntBASIC0.81□□□□□ -2.28
HHLA3Q9XRX5 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.81□□□□□ -2.28
HHLA3Q9XRX5 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.81□□□□□ -2.28
HHLA3Q9XRX5 AC019176.1-201ENST00000518519 225 ntBASIC0.81□□□□□ -2.28
HHLA3Q9XRX5 AC019288.1-201ENST00000557918 224 ntBASIC0.81□□□□□ -2.28
HHLA3Q9XRX5 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.81□□□□□ -2.28
HHLA3Q9XRX5 HMGB1P33-201ENST00000563485 527 ntBASIC0.81□□□□□ -2.28
HHLA3Q9XRX5 PCMTD1P2-201ENST00000565017 355 ntBASIC0.81□□□□□ -2.28
HHLA3Q9XRX5 MTCO2P2-201ENST00000591258 225 ntBASIC0.81□□□□□ -2.28
HHLA3Q9XRX5 AP003465.2-201ENST00000602571 373 ntBASIC0.81□□□□□ -2.28
HHLA3Q9XRX5 AC090578.1-201ENST00000604955 591 ntBASIC0.81□□□□□ -2.28
HHLA3Q9XRX5 AC103810.9-201ENST00000606688 112 ntBASIC0.81□□□□□ -2.28
HHLA3Q9XRX5 AC099654.13-201ENST00000639774 207 ntBASIC0.81□□□□□ -2.28
HHLA3Q9XRX5 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 RNA5SP327-201ENST00000362494 101 ntBASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 RNU6-37P-201ENST00000362692 107 ntBASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 RNU6-11P-201ENST00000364234 107 ntBASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 RNU6-25P-201ENST00000383873 107 ntBASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 RNU6-1-201ENST00000383898 107 ntBASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 RNU6-116P-201ENST00000384042 109 ntBASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 RNU6-48P-201ENST00000384161 107 ntBASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 RNU6-36P-201ENST00000384172 107 ntBASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 RNU6-4P-201ENST00000384205 107 ntBASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 RNU6-5P-201ENST00000384238 107 ntBASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 RNU6-3P-201ENST00000384314 107 ntBASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 RNU6-16P-201ENST00000384385 107 ntBASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 RNU6-15P-201ENST00000384534 107 ntBASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 RNU6-2-201ENST00000384627 107 ntBASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 RNU6-29P-201ENST00000384637 107 ntBASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 RNU6-9-201ENST00000384776 107 ntBASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 RNU6-33P-201ENST00000384793 107 ntBASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 MIR520A-201ENST00000384862 85 ntBASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 MIR513A1-201ENST00000385138 129 ntBASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 RPL23AP32-201ENST00000395315 459 ntBASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 MTCYBP2-201ENST00000407745 171 ntBASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 RNU6-293P-201ENST00000411259 106 ntBASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 AL161935.2-201ENST00000414627 60 ntBASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 SSR1P2-201ENST00000415208 787 ntBASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 AC010975.2-201ENST00000427781 588 ntBASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 AC244670.1-201ENST00000436879 112 ntBASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 AC092473.1-201ENST00000441098 221 ntBASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 snoU13.30-201ENST00000458951 104 ntBASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 RNA5SP269-201ENST00000459032 137 ntBASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 TOMM22P6-201ENST00000465035 409 ntBASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 HMGN2P9-201ENST00000476875 229 ntBASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 RPL30P7-201ENST00000479312 323 ntBASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 AC079140.2-201ENST00000506193 142 ntBASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 AC074344.1-201ENST00000512823 224 ntBASIC0.8□□□□□ -2.28
HHLA3Q9XRX5 RNU6-237P-201ENST00000515985 71 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms