Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 MAPK10-373ENST00000641983 6772 ntBASIC4.65□□□□□ -1.66
COL17A1Q9UMD9 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.65□□□□□ -1.66
COL17A1Q9UMD9 AC138393.1-203ENST00000327086 343 ntBASIC4.65□□□□□ -1.66
COL17A1Q9UMD9 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
COL17A1Q9UMD9 MIR22-201ENST00000362190 85 ntBASIC4.65□□□□□ -1.66
COL17A1Q9UMD9 Y_RNA.309-201ENST00000365046 111 ntBASIC4.65□□□□□ -1.66
COL17A1Q9UMD9 RNU6-429P-201ENST00000384582 108 ntBASIC4.65□□□□□ -1.66
COL17A1Q9UMD9 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
COL17A1Q9UMD9 U3.42-201ENST00000408746 214 ntBASIC4.65□□□□□ -1.66
COL17A1Q9UMD9 RNA5SP89-201ENST00000410300 108 ntBASIC4.65□□□□□ -1.66
COL17A1Q9UMD9 IFNA11P-201ENST00000446352 526 ntBASIC4.65□□□□□ -1.66
COL17A1Q9UMD9 AL137159.1-201ENST00000452808 512 ntBASIC4.65□□□□□ -1.66
COL17A1Q9UMD9 RPS15AP34-201ENST00000487776 387 ntBASIC4.65□□□□□ -1.66
COL17A1Q9UMD9 AC107934.2-201ENST00000518653 310 ntBASIC4.65□□□□□ -1.66
COL17A1Q9UMD9 AC010186.2-204ENST00000537668 439 ntBASIC4.65□□□□□ -1.66
COL17A1Q9UMD9 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.65□□□□□ -1.66
COL17A1Q9UMD9 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.65□□□□□ -1.66
COL17A1Q9UMD9 AL162424.1-201ENST00000602325 221 ntBASIC4.65□□□□□ -1.66
COL17A1Q9UMD9 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.66
COL17A1Q9UMD9 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.65□□□□□ -1.67
COL17A1Q9UMD9 LINC01355-201ENST00000566551 5444 ntBASIC4.65□□□□□ -1.67
COL17A1Q9UMD9 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL17A1Q9UMD9 HSPA8P4-201ENST00000511877 1920 ntBASIC4.64□□□□□ -1.67
COL17A1Q9UMD9 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
COL17A1Q9UMD9 SNORD113-8-201ENST00000363497 74 ntBASIC4.64□□□□□ -1.67
COL17A1Q9UMD9 RNU6-270P-201ENST00000364131 105 ntBASIC4.64□□□□□ -1.67
COL17A1Q9UMD9 RNU6-356P-201ENST00000384140 107 ntBASIC4.64□□□□□ -1.67
COL17A1Q9UMD9 MIR569-201ENST00000385228 96 ntBASIC4.64□□□□□ -1.67
COL17A1Q9UMD9 MIR1302-4-201ENST00000408701 150 ntBASIC4.64□□□□□ -1.67
COL17A1Q9UMD9 Y_RNA.592-201ENST00000410274 109 ntBASIC4.64□□□□□ -1.67
COL17A1Q9UMD9 EI24P1-201ENST00000416584 867 ntBASIC4.64□□□□□ -1.67
COL17A1Q9UMD9 RPS15AP6-201ENST00000420703 385 ntBASIC4.64□□□□□ -1.67
COL17A1Q9UMD9 MTATP6P4-201ENST00000427725 675 ntBASIC4.64□□□□□ -1.67
COL17A1Q9UMD9 CKS1BP5-201ENST00000434172 273 ntBASIC4.64□□□□□ -1.67
COL17A1Q9UMD9 RPL31P13-201ENST00000484151 370 ntBASIC4.64□□□□□ -1.67
COL17A1Q9UMD9 RN7SL20P-201ENST00000488827 297 ntBASIC4.64□□□□□ -1.67
COL17A1Q9UMD9 ANXA2P1-201ENST00000505539 926 ntBASIC4.64□□□□□ -1.67
COL17A1Q9UMD9 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.64□□□□□ -1.67
COL17A1Q9UMD9 Y_RNA.679-201ENST00000516416 91 ntBASIC4.64□□□□□ -1.67
COL17A1Q9UMD9 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
COL17A1Q9UMD9 MIR4308-201ENST00000580634 81 ntBASIC4.64□□□□□ -1.67
COL17A1Q9UMD9 Z99571.1-201ENST00000636677 394 ntBASIC4.64□□□□□ -1.67
COL17A1Q9UMD9 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL17A1Q9UMD9 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
COL17A1Q9UMD9 AC010332.2-201ENST00000613083 1904 ntBASIC4.64□□□□□ -1.67
COL17A1Q9UMD9 RNU6-596P-201ENST00000365395 98 ntBASIC4.63□□□□□ -1.67
COL17A1Q9UMD9 SNORA40-201ENST00000388090 126 ntBASIC4.63□□□□□ -1.67
COL17A1Q9UMD9 AL033519.2-201ENST00000403958 392 ntBASIC4.63□□□□□ -1.67
COL17A1Q9UMD9 AC092809.3-201ENST00000415453 231 ntBASIC4.63□□□□□ -1.67
COL17A1Q9UMD9 MTCO1P39-201ENST00000426148 480 ntBASIC4.63□□□□□ -1.67
COL17A1Q9UMD9 MTND3P9-201ENST00000429526 346 ntBASIC4.63□□□□□ -1.67
COL17A1Q9UMD9 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.63□□□□□ -1.67
COL17A1Q9UMD9 snoU13.3-201ENST00000459441 104 ntBASIC4.63□□□□□ -1.67
COL17A1Q9UMD9 AC083906.5-201ENST00000503722 328 ntBASIC4.63□□□□□ -1.67
COL17A1Q9UMD9 CYCSP26-201ENST00000534107 320 ntBASIC4.63□□□□□ -1.67
COL17A1Q9UMD9 AL161713.1-201ENST00000555538 145 ntBASIC4.63□□□□□ -1.67
COL17A1Q9UMD9 FAM60BP-201ENST00000578364 658 ntBASIC4.63□□□□□ -1.67
COL17A1Q9UMD9 AL008718.3-201ENST00000610217 321 ntBASIC4.63□□□□□ -1.67
COL17A1Q9UMD9 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.63□□□□□ -1.67
COL17A1Q9UMD9 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.63□□□□□ -1.67
COL17A1Q9UMD9 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
COL17A1Q9UMD9 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL17A1Q9UMD9 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL17A1Q9UMD9 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL17A1Q9UMD9 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
COL17A1Q9UMD9 MIR30E-201ENST00000362104 92 ntBASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 RNU6-834P-201ENST00000362367 110 ntBASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 Y_RNA.27-201ENST00000362540 103 ntBASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 Y_RNA.82-201ENST00000363000 102 ntBASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 Y_RNA.92-201ENST00000363043 102 ntBASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 Y_RNA.235-201ENST00000364412 102 ntBASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 Y_RNA.306-201ENST00000365015 102 ntBASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 Y_RNA.308-201ENST00000365043 101 ntBASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 Y_RNA.312-201ENST00000365089 102 ntBASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 Y_RNA.322-201ENST00000365151 102 ntBASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 RHEBP3-201ENST00000411920 351 ntBASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 AC126124.2-201ENST00000413542 321 ntBASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 AL138785.1-201ENST00000425821 331 ntBASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 Y_RNA.650-201ENST00000459002 102 ntBASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 RPL21P41-201ENST00000459863 264 ntBASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 NDUFB4P9-201ENST00000511646 388 ntBASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 RNU6-496P-201ENST00000516145 99 ntBASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 Y_RNA.777-201ENST00000516982 102 ntBASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 SYF2P1-201ENST00000550658 413 ntBASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 Y_RNA.771-201ENST00000598668 102 ntBASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 RMST_8.1-201ENST00000610287 165 ntBASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 uc_338.1-201ENST00000612113 180 ntBASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 Y_RNA.789-201ENST00000622480 102 ntBASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 AC017071.1-201ENST00000564407 2204 ntBASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 Y_RNA.590-201ENST00000410140 107 ntBASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.62□□□□□ -1.67
COL17A1Q9UMD9 MTCO1P5-201ENST00000433573 344 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms