Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC093303.1-201ENST00000514549 295 ntBASIC3.08□□□□□ -1.92
COL20A1Q9P218 RNU6-1213P-201ENST00000517075 94 ntBASIC3.08□□□□□ -1.92
COL20A1Q9P218 RNU6-264P-201ENST00000517134 104 ntBASIC3.08□□□□□ -1.92
COL20A1Q9P218 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
COL20A1Q9P218 AC007375.1-201ENST00000554513 578 ntBASIC3.08□□□□□ -1.92
COL20A1Q9P218 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.08□□□□□ -1.92
COL20A1Q9P218 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.08□□□□□ -1.92
COL20A1Q9P218 MIR4765-201ENST00000585007 77 ntBASIC3.08□□□□□ -1.92
COL20A1Q9P218 AC090971.5-201ENST00000621102 293 ntBASIC3.08□□□□□ -1.92
COL20A1Q9P218 AP000560.1-201ENST00000624150 1937 ntBASIC3.08□□□□□ -1.92
COL20A1Q9P218 AC092435.3-201ENST00000565538 3654 ntBASIC3.07□□□□□ -1.92
COL20A1Q9P218 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
COL20A1Q9P218 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
COL20A1Q9P218 AC092268.1-201ENST00000342691 405 ntBASIC3.07□□□□□ -1.92
COL20A1Q9P218 DYNLT3P1-201ENST00000378574 347 ntBASIC3.07□□□□□ -1.92
COL20A1Q9P218 RNU6-1011P-201ENST00000384668 107 ntBASIC3.07□□□□□ -1.92
COL20A1Q9P218 Y_RNA.579-201ENST00000390939 94 ntBASIC3.07□□□□□ -1.92
COL20A1Q9P218 RN7SKP61-201ENST00000410642 295 ntBASIC3.07□□□□□ -1.92
COL20A1Q9P218 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.07□□□□□ -1.92
COL20A1Q9P218 MTCO3P10-201ENST00000455912 772 ntBASIC3.07□□□□□ -1.92
COL20A1Q9P218 SNRPGP7-201ENST00000469016 106 ntBASIC3.07□□□□□ -1.92
COL20A1Q9P218 AC006483.1-201ENST00000487308 313 ntBASIC3.07□□□□□ -1.92
COL20A1Q9P218 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.07□□□□□ -1.92
COL20A1Q9P218 RNA5SP112-201ENST00000515937 99 ntBASIC3.07□□□□□ -1.92
COL20A1Q9P218 Y_RNA.701-201ENST00000516812 110 ntBASIC3.07□□□□□ -1.92
COL20A1Q9P218 AC079598.5-201ENST00000547460 117 ntBASIC3.07□□□□□ -1.92
COL20A1Q9P218 HSPE1P4-201ENST00000550617 308 ntBASIC3.07□□□□□ -1.92
COL20A1Q9P218 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.07□□□□□ -1.92
COL20A1Q9P218 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.07□□□□□ -1.92
COL20A1Q9P218 7SK.7-201ENST00000603504 247 ntBASIC3.07□□□□□ -1.92
COL20A1Q9P218 AC243829.7-201ENST00000633081 225 ntBASIC3.07□□□□□ -1.92
COL20A1Q9P218 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
COL20A1Q9P218 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
COL20A1Q9P218 MTND5P19-201ENST00000424872 1794 ntBASIC3.07□□□□□ -1.92
COL20A1Q9P218 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
COL20A1Q9P218 MIR26A1-201ENST00000362205 77 ntBASIC3.06□□□□□ -1.92
COL20A1Q9P218 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
COL20A1Q9P218 XGY1-201ENST00000381172 446 ntBASIC3.06□□□□□ -1.92
COL20A1Q9P218 MIR196B-201ENST00000384852 84 ntBASIC3.06□□□□□ -1.92
COL20A1Q9P218 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
COL20A1Q9P218 ZNF299P-201ENST00000406845 1804 ntBASIC3.06□□□□□ -1.92
COL20A1Q9P218 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.06□□□□□ -1.92
COL20A1Q9P218 AC097463.2-201ENST00000421074 142 ntBASIC3.06□□□□□ -1.92
COL20A1Q9P218 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.06□□□□□ -1.92
COL20A1Q9P218 Z98742.2-201ENST00000431564 187 ntBASIC3.06□□□□□ -1.92
COL20A1Q9P218 AC244670.1-201ENST00000436879 112 ntBASIC3.06□□□□□ -1.92
COL20A1Q9P218 AC011816.1-201ENST00000441346 546 ntBASIC3.06□□□□□ -1.92
COL20A1Q9P218 AL513124.1-201ENST00000450410 614 ntBASIC3.06□□□□□ -1.92
COL20A1Q9P218 AC112771.1-201ENST00000463581 102 ntBASIC3.06□□□□□ -1.92
COL20A1Q9P218 AC027575.1-201ENST00000481064 460 ntBASIC3.06□□□□□ -1.92
COL20A1Q9P218 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.06□□□□□ -1.92
COL20A1Q9P218 SCARNA17.1-201ENST00000516211 143 ntBASIC3.06□□□□□ -1.92
COL20A1Q9P218 SNORA31.6-201ENST00000516241 130 ntBASIC3.06□□□□□ -1.92
COL20A1Q9P218 SCARNA17.2-201ENST00000516334 143 ntBASIC3.06□□□□□ -1.92
COL20A1Q9P218 SCARNA16.2-201ENST00000516520 172 ntBASIC3.06□□□□□ -1.92
COL20A1Q9P218 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.06□□□□□ -1.92
COL20A1Q9P218 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.06□□□□□ -1.92
COL20A1Q9P218 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.06□□□□□ -1.92
COL20A1Q9P218 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.06□□□□□ -1.92
COL20A1Q9P218 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.06□□□□□ -1.92
COL20A1Q9P218 MIR5696-201ENST00000578474 85 ntBASIC3.06□□□□□ -1.92
COL20A1Q9P218 MIR4298-201ENST00000584380 73 ntBASIC3.06□□□□□ -1.92
COL20A1Q9P218 AC073410.2-201ENST00000603240 332 ntBASIC3.06□□□□□ -1.92
COL20A1Q9P218 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.06□□□□□ -1.92
COL20A1Q9P218 AC009318.2-201ENST00000610917 651 ntBASIC3.06□□□□□ -1.92
COL20A1Q9P218 SCARNA17.4-201ENST00000614296 143 ntBASIC3.06□□□□□ -1.92
COL20A1Q9P218 AC010329.5-201ENST00000623497 2174 ntBASIC3.06□□□□□ -1.92
COL20A1Q9P218 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.05□□□□□ -1.92
COL20A1Q9P218 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
COL20A1Q9P218 OR56A5-201ENST00000340110 738 ntBASIC3.05□□□□□ -1.92
COL20A1Q9P218 RNU4-82P-201ENST00000362443 140 ntBASIC3.05□□□□□ -1.92
COL20A1Q9P218 RNU6-212P-201ENST00000362642 104 ntBASIC3.05□□□□□ -1.92
COL20A1Q9P218 SNORD50.1-201ENST00000362987 71 ntBASIC3.05□□□□□ -1.92
COL20A1Q9P218 RNU6-486P-201ENST00000363116 107 ntBASIC3.05□□□□□ -1.92
COL20A1Q9P218 RNU6-1285P-201ENST00000363480 105 ntBASIC3.05□□□□□ -1.92
COL20A1Q9P218 RNA5SP126-201ENST00000365092 109 ntBASIC3.05□□□□□ -1.92
COL20A1Q9P218 RNU6-968P-201ENST00000384076 107 ntBASIC3.05□□□□□ -1.92
COL20A1Q9P218 RNU6-890P-201ENST00000384121 107 ntBASIC3.05□□□□□ -1.92
COL20A1Q9P218 RNU6-331P-201ENST00000384724 107 ntBASIC3.05□□□□□ -1.92
COL20A1Q9P218 BX276092.3-201ENST00000424182 230 ntBASIC3.05□□□□□ -1.92
COL20A1Q9P218 FO393415.2-201ENST00000480085 343 ntBASIC3.05□□□□□ -1.92
COL20A1Q9P218 AC005741.1-201ENST00000511094 432 ntBASIC3.05□□□□□ -1.92
COL20A1Q9P218 RNA5SP384-201ENST00000516615 116 ntBASIC3.05□□□□□ -1.92
COL20A1Q9P218 AC093249.1-201ENST00000567049 203 ntBASIC3.05□□□□□ -1.92
COL20A1Q9P218 AC004832.5-201ENST00000608677 401 ntBASIC3.05□□□□□ -1.92
COL20A1Q9P218 HMGB1P24-202ENST00000615653 685 ntBASIC3.05□□□□□ -1.92
COL20A1Q9P218 AC092608.2-201ENST00000624427 218 ntBASIC3.05□□□□□ -1.92
COL20A1Q9P218 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
COL20A1Q9P218 AC008264.2-201ENST00000610193 3731 ntBASIC3.05□□□□□ -1.92
COL20A1Q9P218 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
COL20A1Q9P218 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
COL20A1Q9P218 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
COL20A1Q9P218 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
COL20A1Q9P218 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
COL20A1Q9P218 Z75746.1-201ENST00000440243 2080 ntBASIC3.04□□□□□ -1.92
COL20A1Q9P218 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.04□□□□□ -1.92
COL20A1Q9P218 SNORD21-201ENST00000383953 95 ntBASIC3.04□□□□□ -1.92
COL20A1Q9P218 RNU6-1040P-201ENST00000383974 107 ntBASIC3.04□□□□□ -1.92
COL20A1Q9P218 Y_RNA.504-201ENST00000384481 104 ntBASIC3.04□□□□□ -1.92
COL20A1Q9P218 RNU1-57P-201ENST00000384491 166 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms