Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.87□□□□□ -1.95
NCKIPSDQ9NZQ3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.87□□□□□ -1.95
NCKIPSDQ9NZQ3 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.87□□□□□ -1.95
NCKIPSDQ9NZQ3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
NCKIPSDQ9NZQ3 RNU6-428P-201ENST00000362942 107 ntBASIC2.87□□□□□ -1.95
NCKIPSDQ9NZQ3 Y_RNA.133-201ENST00000363428 110 ntBASIC2.87□□□□□ -1.95
NCKIPSDQ9NZQ3 SNORD21-201ENST00000383953 95 ntBASIC2.87□□□□□ -1.95
NCKIPSDQ9NZQ3 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.87□□□□□ -1.95
NCKIPSDQ9NZQ3 AC018865.2-201ENST00000423631 129 ntBASIC2.87□□□□□ -1.95
NCKIPSDQ9NZQ3 AL358176.2-201ENST00000425769 204 ntBASIC2.87□□□□□ -1.95
NCKIPSDQ9NZQ3 AC063976.3-201ENST00000426849 329 ntBASIC2.87□□□□□ -1.95
NCKIPSDQ9NZQ3 AC104332.2-201ENST00000429959 156 ntBASIC2.87□□□□□ -1.95
NCKIPSDQ9NZQ3 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.87□□□□□ -1.95
NCKIPSDQ9NZQ3 OSTCP8-201ENST00000445117 448 ntBASIC2.87□□□□□ -1.95
NCKIPSDQ9NZQ3 AC013470.1-201ENST00000453438 462 ntBASIC2.87□□□□□ -1.95
NCKIPSDQ9NZQ3 MRPL42P6-201ENST00000486397 371 ntBASIC2.87□□□□□ -1.95
NCKIPSDQ9NZQ3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.87□□□□□ -1.95
NCKIPSDQ9NZQ3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.87□□□□□ -1.95
NCKIPSDQ9NZQ3 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.87□□□□□ -1.95
NCKIPSDQ9NZQ3 SCARNA16.2-201ENST00000516520 172 ntBASIC2.87□□□□□ -1.95
NCKIPSDQ9NZQ3 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.87□□□□□ -1.95
NCKIPSDQ9NZQ3 AC109446.1-201ENST00000566172 220 ntBASIC2.87□□□□□ -1.95
NCKIPSDQ9NZQ3 RPL23AP78-201ENST00000599928 470 ntBASIC2.87□□□□□ -1.95
NCKIPSDQ9NZQ3 AC009314.1-201ENST00000603871 304 ntBASIC2.87□□□□□ -1.95
NCKIPSDQ9NZQ3 AC091152.3-201ENST00000604227 325 ntBASIC2.87□□□□□ -1.95
NCKIPSDQ9NZQ3 7SK.10-201ENST00000621414 298 ntBASIC2.87□□□□□ -1.95
NCKIPSDQ9NZQ3 AC091925.1-201ENST00000623204 462 ntBASIC2.87□□□□□ -1.95
NCKIPSDQ9NZQ3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
NCKIPSDQ9NZQ3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
NCKIPSDQ9NZQ3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
NCKIPSDQ9NZQ3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
NCKIPSDQ9NZQ3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
NCKIPSDQ9NZQ3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.86□□□□□ -1.95
NCKIPSDQ9NZQ3 Y_RNA.252-201ENST00000364556 101 ntBASIC2.86□□□□□ -1.95
NCKIPSDQ9NZQ3 RNU5E-7P-201ENST00000365290 117 ntBASIC2.86□□□□□ -1.95
NCKIPSDQ9NZQ3 Y_RNA.463-201ENST00000384271 102 ntBASIC2.86□□□□□ -1.95
NCKIPSDQ9NZQ3 MIR512-1-201ENST00000384913 84 ntBASIC2.86□□□□□ -1.95
NCKIPSDQ9NZQ3 FTH1P15-201ENST00000406984 280 ntBASIC2.86□□□□□ -1.95
NCKIPSDQ9NZQ3 RNU6-293P-201ENST00000411259 106 ntBASIC2.86□□□□□ -1.95
NCKIPSDQ9NZQ3 USMG5P1-201ENST00000425964 177 ntBASIC2.86□□□□□ -1.95
NCKIPSDQ9NZQ3 AC087499.2-201ENST00000432861 149 ntBASIC2.86□□□□□ -1.95
NCKIPSDQ9NZQ3 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.86□□□□□ -1.95
NCKIPSDQ9NZQ3 PCMTD1P1-201ENST00000455560 355 ntBASIC2.86□□□□□ -1.95
NCKIPSDQ9NZQ3 RPS29P26-201ENST00000477483 171 ntBASIC2.86□□□□□ -1.95
NCKIPSDQ9NZQ3 AC021146.2-201ENST00000504736 556 ntBASIC2.86□□□□□ -1.95
NCKIPSDQ9NZQ3 RN7SKP295-201ENST00000517264 153 ntBASIC2.86□□□□□ -1.95
NCKIPSDQ9NZQ3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.86□□□□□ -1.95
NCKIPSDQ9NZQ3 AC103996.1-201ENST00000555468 102 ntBASIC2.86□□□□□ -1.95
NCKIPSDQ9NZQ3 AL391813.1-201ENST00000603098 260 ntBASIC2.86□□□□□ -1.95
NCKIPSDQ9NZQ3 AC024153.1-201ENST00000603103 365 ntBASIC2.86□□□□□ -1.95
NCKIPSDQ9NZQ3 MIR3976-201ENST00000606807 139 ntBASIC2.86□□□□□ -1.95
NCKIPSDQ9NZQ3 AC083806.3-201ENST00000614016 455 ntBASIC2.86□□□□□ -1.95
NCKIPSDQ9NZQ3 AC090617.7-201ENST00000623952 126 ntBASIC2.86□□□□□ -1.95
NCKIPSDQ9NZQ3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
NCKIPSDQ9NZQ3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
NCKIPSDQ9NZQ3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.86□□□□□ -1.95
NCKIPSDQ9NZQ3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.86□□□□□ -1.95
NCKIPSDQ9NZQ3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
NCKIPSDQ9NZQ3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
NCKIPSDQ9NZQ3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.85□□□□□ -1.95
NCKIPSDQ9NZQ3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
NCKIPSDQ9NZQ3 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.85□□□□□ -1.95
NCKIPSDQ9NZQ3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NCKIPSDQ9NZQ3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NCKIPSDQ9NZQ3 RNU6-78P-201ENST00000362897 107 ntBASIC2.85□□□□□ -1.95
NCKIPSDQ9NZQ3 Y_RNA.148-201ENST00000363557 117 ntBASIC2.85□□□□□ -1.95
NCKIPSDQ9NZQ3 Y_RNA.158-201ENST00000363651 101 ntBASIC2.85□□□□□ -1.95
NCKIPSDQ9NZQ3 RNU6-1317P-201ENST00000364582 104 ntBASIC2.85□□□□□ -1.95
NCKIPSDQ9NZQ3 Y_RNA.496-201ENST00000384444 101 ntBASIC2.85□□□□□ -1.95
NCKIPSDQ9NZQ3 RNU6-1105P-201ENST00000384774 107 ntBASIC2.85□□□□□ -1.95
NCKIPSDQ9NZQ3 MIR181A2-201ENST00000384863 110 ntBASIC2.85□□□□□ -1.95
NCKIPSDQ9NZQ3 RNU6-174P-201ENST00000410406 106 ntBASIC2.85□□□□□ -1.95
NCKIPSDQ9NZQ3 RPL23AP58-201ENST00000440453 469 ntBASIC2.85□□□□□ -1.95
NCKIPSDQ9NZQ3 DAP3P1-201ENST00000441522 278 ntBASIC2.85□□□□□ -1.95
NCKIPSDQ9NZQ3 SEM1P1-201ENST00000506694 209 ntBASIC2.85□□□□□ -1.95
NCKIPSDQ9NZQ3 SNORA25.10-201ENST00000515926 124 ntBASIC2.85□□□□□ -1.95
NCKIPSDQ9NZQ3 RNU6-1046P-201ENST00000516538 107 ntBASIC2.85□□□□□ -1.95
NCKIPSDQ9NZQ3 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.85□□□□□ -1.95
NCKIPSDQ9NZQ3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.85□□□□□ -1.95
NCKIPSDQ9NZQ3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
NCKIPSDQ9NZQ3 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.85□□□□□ -1.95
NCKIPSDQ9NZQ3 AL132822.1-201ENST00000617063 513 ntBASIC2.85□□□□□ -1.95
NCKIPSDQ9NZQ3 AC138305.3-201ENST00000624988 240 ntBASIC2.85□□□□□ -1.95
NCKIPSDQ9NZQ3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.85□□□□□ -1.95
NCKIPSDQ9NZQ3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.85□□□□□ -1.95
NCKIPSDQ9NZQ3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.84□□□□□ -1.95
NCKIPSDQ9NZQ3 RNU6-942P-201ENST00000363002 107 ntBASIC2.84□□□□□ -1.95
NCKIPSDQ9NZQ3 RNU6-1032P-201ENST00000384100 107 ntBASIC2.84□□□□□ -1.95
NCKIPSDQ9NZQ3 RNU6-196P-201ENST00000384315 107 ntBASIC2.84□□□□□ -1.95
NCKIPSDQ9NZQ3 RNU6-748P-201ENST00000384648 107 ntBASIC2.84□□□□□ -1.95
NCKIPSDQ9NZQ3 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.84□□□□□ -1.95
NCKIPSDQ9NZQ3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.84□□□□□ -1.95
NCKIPSDQ9NZQ3 AC113618.1-201ENST00000416747 285 ntBASIC2.84□□□□□ -1.95
NCKIPSDQ9NZQ3 BX276092.3-201ENST00000424182 230 ntBASIC2.84□□□□□ -1.95
NCKIPSDQ9NZQ3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
NCKIPSDQ9NZQ3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.84□□□□□ -1.95
NCKIPSDQ9NZQ3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
NCKIPSDQ9NZQ3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.84□□□□□ -1.95
NCKIPSDQ9NZQ3 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
NCKIPSDQ9NZQ3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms