Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 TOMM22P6-201ENST00000465035 409 ntBASIC3.21□□□□□ -1.9
MKS1Q9NXB0 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.21□□□□□ -1.9
MKS1Q9NXB0 AC144568.1-201ENST00000520139 137 ntBASIC3.21□□□□□ -1.9
MKS1Q9NXB0 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
MKS1Q9NXB0 AC027176.1-201ENST00000560204 514 ntBASIC3.21□□□□□ -1.9
MKS1Q9NXB0 CYP4A27P-201ENST00000567218 190 ntBASIC3.21□□□□□ -1.9
MKS1Q9NXB0 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.21□□□□□ -1.9
MKS1Q9NXB0 AC040896.1-201ENST00000613819 479 ntBASIC3.21□□□□□ -1.9
MKS1Q9NXB0 MIR7157-201ENST00000635801 60 ntBASIC3.21□□□□□ -1.9
MKS1Q9NXB0 AC000403.1-201ENST00000613696 3585 ntBASIC3.21□□□□□ -1.9
MKS1Q9NXB0 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.21□□□□□ -1.9
MKS1Q9NXB0 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.21□□□□□ -1.9
MKS1Q9NXB0 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
MKS1Q9NXB0 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
MKS1Q9NXB0 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
MKS1Q9NXB0 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
MKS1Q9NXB0 RNU4-42P-201ENST00000364738 142 ntBASIC3.2□□□□□ -1.9
MKS1Q9NXB0 Y_RNA.364-201ENST00000365532 101 ntBASIC3.2□□□□□ -1.9
MKS1Q9NXB0 U8.10-201ENST00000384260 133 ntBASIC3.2□□□□□ -1.9
MKS1Q9NXB0 MIR153-2-201ENST00000385225 87 ntBASIC3.2□□□□□ -1.9
MKS1Q9NXB0 MIR887-201ENST00000401258 79 ntBASIC3.2□□□□□ -1.9
MKS1Q9NXB0 RNU2-25P-201ENST00000411041 191 ntBASIC3.2□□□□□ -1.9
MKS1Q9NXB0 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.2□□□□□ -1.9
MKS1Q9NXB0 AL160004.2-201ENST00000432935 350 ntBASIC3.2□□□□□ -1.9
MKS1Q9NXB0 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.2□□□□□ -1.9
MKS1Q9NXB0 OR2AQ1P-201ENST00000451972 200 ntBASIC3.2□□□□□ -1.9
MKS1Q9NXB0 RPL23AP70-201ENST00000483361 460 ntBASIC3.2□□□□□ -1.9
MKS1Q9NXB0 RNU4-77P-201ENST00000516692 156 ntBASIC3.2□□□□□ -1.9
MKS1Q9NXB0 RN7SKP272-201ENST00000516988 232 ntBASIC3.2□□□□□ -1.9
MKS1Q9NXB0 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
MKS1Q9NXB0 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.2□□□□□ -1.9
MKS1Q9NXB0 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.2□□□□□ -1.9
MKS1Q9NXB0 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.2□□□□□ -1.9
MKS1Q9NXB0 MIR3923-201ENST00000579521 83 ntBASIC3.2□□□□□ -1.9
MKS1Q9NXB0 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.2□□□□□ -1.9
MKS1Q9NXB0 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
MKS1Q9NXB0 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
MKS1Q9NXB0 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
MKS1Q9NXB0 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.2□□□□□ -1.9
MKS1Q9NXB0 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
MKS1Q9NXB0 Y_RNA.39-201ENST00000362620 98 ntBASIC3.19□□□□□ -1.9
MKS1Q9NXB0 RNU6-1159P-201ENST00000362933 107 ntBASIC3.19□□□□□ -1.9
MKS1Q9NXB0 RNY3P11-201ENST00000364153 102 ntBASIC3.19□□□□□ -1.9
MKS1Q9NXB0 Y_RNA.422-201ENST00000384054 114 ntBASIC3.19□□□□□ -1.9
MKS1Q9NXB0 SNORA69.1-201ENST00000390904 137 ntBASIC3.19□□□□□ -1.9
MKS1Q9NXB0 CYCSP19-201ENST00000411715 316 ntBASIC3.19□□□□□ -1.9
MKS1Q9NXB0 RPL30P4-201ENST00000429309 333 ntBASIC3.19□□□□□ -1.9
MKS1Q9NXB0 AL118496.2-201ENST00000448300 230 ntBASIC3.19□□□□□ -1.9
MKS1Q9NXB0 AL353752.1-201ENST00000454946 260 ntBASIC3.19□□□□□ -1.9
MKS1Q9NXB0 RPS3P1-201ENST00000456781 192 ntBASIC3.19□□□□□ -1.9
MKS1Q9NXB0 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.19□□□□□ -1.9
MKS1Q9NXB0 AC025518.1-201ENST00000479856 347 ntBASIC3.19□□□□□ -1.9
MKS1Q9NXB0 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.19□□□□□ -1.9
MKS1Q9NXB0 SCARNA3-201ENST00000517097 143 ntBASIC3.19□□□□□ -1.9
MKS1Q9NXB0 RPL30P11-203ENST00000598995 310 ntBASIC3.19□□□□□ -1.9
MKS1Q9NXB0 AC073657.2-201ENST00000605661 303 ntBASIC3.19□□□□□ -1.9
MKS1Q9NXB0 AC138305.3-201ENST00000624988 240 ntBASIC3.19□□□□□ -1.9
MKS1Q9NXB0 AL606534.2-204ENST00000635008 178 ntBASIC3.19□□□□□ -1.9
MKS1Q9NXB0 MIR4272-201ENST00000635924 64 ntBASIC3.19□□□□□ -1.9
MKS1Q9NXB0 AC009093.8-201ENST00000641769 292 ntBASIC3.19□□□□□ -1.9
MKS1Q9NXB0 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.19□□□□□ -1.9
MKS1Q9NXB0 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
MKS1Q9NXB0 MAPK10-266ENST00000641066 6555 ntBASIC3.18□□□□□ -1.9
MKS1Q9NXB0 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
MKS1Q9NXB0 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.18□□□□□ -1.9
MKS1Q9NXB0 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
MKS1Q9NXB0 RNU4-15P-201ENST00000362613 141 ntBASIC3.18□□□□□ -1.9
MKS1Q9NXB0 Y_RNA.106-201ENST00000363189 100 ntBASIC3.18□□□□□ -1.9
MKS1Q9NXB0 AC117470.1-201ENST00000381974 330 ntBASIC3.18□□□□□ -1.9
MKS1Q9NXB0 U6atac.2-201ENST00000408644 118 ntBASIC3.18□□□□□ -1.9
MKS1Q9NXB0 RN7SKP202-201ENST00000410439 330 ntBASIC3.18□□□□□ -1.9
MKS1Q9NXB0 Y_RNA.605-201ENST00000410577 105 ntBASIC3.18□□□□□ -1.9
MKS1Q9NXB0 RPS26P42-201ENST00000413485 326 ntBASIC3.18□□□□□ -1.9
MKS1Q9NXB0 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.18□□□□□ -1.9
MKS1Q9NXB0 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.18□□□□□ -1.9
MKS1Q9NXB0 UBBP3-201ENST00000445497 241 ntBASIC3.18□□□□□ -1.9
MKS1Q9NXB0 CHEK2P4-201ENST00000450340 246 ntBASIC3.18□□□□□ -1.9
MKS1Q9NXB0 AC073901.1-201ENST00000462471 408 ntBASIC3.18□□□□□ -1.9
MKS1Q9NXB0 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.18□□□□□ -1.9
MKS1Q9NXB0 AC104619.4-201ENST00000510773 249 ntBASIC3.18□□□□□ -1.9
MKS1Q9NXB0 RN7SKP43-201ENST00000516173 320 ntBASIC3.18□□□□□ -1.9
MKS1Q9NXB0 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.18□□□□□ -1.9
MKS1Q9NXB0 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.18□□□□□ -1.9
MKS1Q9NXB0 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.18□□□□□ -1.9
MKS1Q9NXB0 AC006504.6-201ENST00000590142 199 ntBASIC3.18□□□□□ -1.9
MKS1Q9NXB0 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.18□□□□□ -1.9
MKS1Q9NXB0 AC005520.5-201ENST00000613926 164 ntBASIC3.18□□□□□ -1.9
MKS1Q9NXB0 AC080128.1-201ENST00000474389 1917 ntBASIC3.18□□□□□ -1.9
MKS1Q9NXB0 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
MKS1Q9NXB0 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.18□□□□□ -1.9
MKS1Q9NXB0 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
MKS1Q9NXB0 MTND4P1-201ENST00000457501 1466 ntBASIC3.17□□□□□ -1.9
MKS1Q9NXB0 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.17□□□□□ -1.9
MKS1Q9NXB0 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
MKS1Q9NXB0 RNU1-109P-201ENST00000383960 147 ntBASIC3.17□□□□□ -1.9
MKS1Q9NXB0 MIR554-201ENST00000384874 96 ntBASIC3.17□□□□□ -1.9
MKS1Q9NXB0 MIR218-1-201ENST00000384999 110 ntBASIC3.17□□□□□ -1.9
MKS1Q9NXB0 MRPL42P3-201ENST00000401492 326 ntBASIC3.17□□□□□ -1.9
MKS1Q9NXB0 FO393413.1-201ENST00000402892 195 ntBASIC3.17□□□□□ -1.9
MKS1Q9NXB0 RNU6ATAC-201ENST00000408749 126 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 156.5 ms