Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 RNU6-778P-201ENST00000363269 103 ntBASIC3.21□□□□□ -1.9
PARPBPQ9NWS1 Y_RNA.170-201ENST00000363746 110 ntBASIC3.21□□□□□ -1.9
PARPBPQ9NWS1 SNORD115-32-201ENST00000364079 82 ntBASIC3.21□□□□□ -1.9
PARPBPQ9NWS1 RNA5SP51-201ENST00000364750 119 ntBASIC3.21□□□□□ -1.9
PARPBPQ9NWS1 SNORA36A-201ENST00000384221 132 ntBASIC3.21□□□□□ -1.9
PARPBPQ9NWS1 U8.10-201ENST00000384260 133 ntBASIC3.21□□□□□ -1.9
PARPBPQ9NWS1 SNORD116-20-201ENST00000384529 92 ntBASIC3.21□□□□□ -1.9
PARPBPQ9NWS1 MIR10B-201ENST00000385011 110 ntBASIC3.21□□□□□ -1.9
PARPBPQ9NWS1 RNU6-1001P-201ENST00000411265 100 ntBASIC3.21□□□□□ -1.9
PARPBPQ9NWS1 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.21□□□□□ -1.9
PARPBPQ9NWS1 AC096638.1-201ENST00000444678 216 ntBASIC3.21□□□□□ -1.9
PARPBPQ9NWS1 SNRPGP7-201ENST00000469016 106 ntBASIC3.21□□□□□ -1.9
PARPBPQ9NWS1 RNU6-1114P-201ENST00000516022 107 ntBASIC3.21□□□□□ -1.9
PARPBPQ9NWS1 RNU2-27P-201ENST00000516185 142 ntBASIC3.21□□□□□ -1.9
PARPBPQ9NWS1 RNU6-346P-201ENST00000516288 111 ntBASIC3.21□□□□□ -1.9
PARPBPQ9NWS1 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.21□□□□□ -1.9
PARPBPQ9NWS1 RNU2-31P-201ENST00000516954 155 ntBASIC3.21□□□□□ -1.9
PARPBPQ9NWS1 AP004607.1-201ENST00000524456 203 ntBASIC3.21□□□□□ -1.9
PARPBPQ9NWS1 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.21□□□□□ -1.9
PARPBPQ9NWS1 LINC00933-203ENST00000559812 219 ntBASIC3.21□□□□□ -1.9
PARPBPQ9NWS1 MIR5695-201ENST00000579717 85 ntBASIC3.21□□□□□ -1.9
PARPBPQ9NWS1 MIR4423-201ENST00000580922 80 ntBASIC3.21□□□□□ -1.9
PARPBPQ9NWS1 FTX_3.1-201ENST00000610451 147 ntBASIC3.21□□□□□ -1.9
PARPBPQ9NWS1 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.21□□□□□ -1.9
PARPBPQ9NWS1 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.21□□□□□ -1.9
PARPBPQ9NWS1 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
PARPBPQ9NWS1 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.21□□□□□ -1.9
PARPBPQ9NWS1 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PARPBPQ9NWS1 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
PARPBPQ9NWS1 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.21□□□□□ -1.9
PARPBPQ9NWS1 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
PARPBPQ9NWS1 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PARPBPQ9NWS1 SNORD56.1-201ENST00000362913 68 ntBASIC3.2□□□□□ -1.9
PARPBPQ9NWS1 RNU5B-2P-201ENST00000363036 113 ntBASIC3.2□□□□□ -1.9
PARPBPQ9NWS1 RNU6-626P-201ENST00000363354 107 ntBASIC3.2□□□□□ -1.9
PARPBPQ9NWS1 RNU6-326P-201ENST00000365480 107 ntBASIC3.2□□□□□ -1.9
PARPBPQ9NWS1 SNORA5A-201ENST00000384111 134 ntBASIC3.2□□□□□ -1.9
PARPBPQ9NWS1 RNU6-378P-201ENST00000384324 107 ntBASIC3.2□□□□□ -1.9
PARPBPQ9NWS1 Y_RNA.569-201ENST00000384749 103 ntBASIC3.2□□□□□ -1.9
PARPBPQ9NWS1 MIR153-2-201ENST00000385225 87 ntBASIC3.2□□□□□ -1.9
PARPBPQ9NWS1 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.2□□□□□ -1.9
PARPBPQ9NWS1 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.2□□□□□ -1.9
PARPBPQ9NWS1 AL590383.1-201ENST00000428602 75 ntBASIC3.2□□□□□ -1.9
PARPBPQ9NWS1 AC009237.7-201ENST00000447357 229 ntBASIC3.2□□□□□ -1.9
PARPBPQ9NWS1 AC073901.1-201ENST00000462471 408 ntBASIC3.2□□□□□ -1.9
PARPBPQ9NWS1 AP002884.2-201ENST00000471647 395 ntBASIC3.2□□□□□ -1.9
PARPBPQ9NWS1 SEPT14P8-201ENST00000508026 178 ntBASIC3.2□□□□□ -1.9
PARPBPQ9NWS1 RNY3P16-201ENST00000516338 101 ntBASIC3.2□□□□□ -1.9
PARPBPQ9NWS1 RNU6-567P-201ENST00000516746 107 ntBASIC3.2□□□□□ -1.9
PARPBPQ9NWS1 RNU7-110P-201ENST00000516891 62 ntBASIC3.2□□□□□ -1.9
PARPBPQ9NWS1 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PARPBPQ9NWS1 RPL21P9-201ENST00000556149 474 ntBASIC3.2□□□□□ -1.9
PARPBPQ9NWS1 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.2□□□□□ -1.9
PARPBPQ9NWS1 AL162424.1-201ENST00000602325 221 ntBASIC3.2□□□□□ -1.9
PARPBPQ9NWS1 SNORD113-5-201ENST00000607261 78 ntBASIC3.2□□□□□ -1.9
PARPBPQ9NWS1 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.2□□□□□ -1.9
PARPBPQ9NWS1 AC005296.1-201ENST00000616145 209 ntBASIC3.2□□□□□ -1.9
PARPBPQ9NWS1 AL034408.1-202ENST00000636088 415 ntBASIC3.2□□□□□ -1.9
PARPBPQ9NWS1 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.2□□□□□ -1.9
PARPBPQ9NWS1 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
PARPBPQ9NWS1 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
PARPBPQ9NWS1 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PARPBPQ9NWS1 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PARPBPQ9NWS1 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PARPBPQ9NWS1 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PARPBPQ9NWS1 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.19□□□□□ -1.9
PARPBPQ9NWS1 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.19□□□□□ -1.9
PARPBPQ9NWS1 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PARPBPQ9NWS1 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PARPBPQ9NWS1 RNU6-20P-201ENST00000384106 107 ntBASIC3.19□□□□□ -1.9
PARPBPQ9NWS1 RNU6-281P-201ENST00000384212 103 ntBASIC3.19□□□□□ -1.9
PARPBPQ9NWS1 RNU6-1197P-201ENST00000391183 107 ntBASIC3.19□□□□□ -1.9
PARPBPQ9NWS1 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.19□□□□□ -1.9
PARPBPQ9NWS1 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.19□□□□□ -1.9
PARPBPQ9NWS1 MIR548I2-201ENST00000408348 149 ntBASIC3.19□□□□□ -1.9
PARPBPQ9NWS1 AL512844.2-201ENST00000433990 593 ntBASIC3.19□□□□□ -1.9
PARPBPQ9NWS1 NDUFB1P1-201ENST00000435191 180 ntBASIC3.19□□□□□ -1.9
PARPBPQ9NWS1 AC007969.2-201ENST00000441891 191 ntBASIC3.19□□□□□ -1.9
PARPBPQ9NWS1 MRPS10P1-201ENST00000448483 130 ntBASIC3.19□□□□□ -1.9
PARPBPQ9NWS1 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.19□□□□□ -1.9
PARPBPQ9NWS1 AC109925.1-201ENST00000478069 331 ntBASIC3.19□□□□□ -1.9
PARPBPQ9NWS1 AC106707.2-201ENST00000484182 374 ntBASIC3.19□□□□□ -1.9
PARPBPQ9NWS1 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.19□□□□□ -1.9
PARPBPQ9NWS1 RNU6-1278P-201ENST00000516130 107 ntBASIC3.19□□□□□ -1.9
PARPBPQ9NWS1 RNU6-966P-201ENST00000516479 104 ntBASIC3.19□□□□□ -1.9
PARPBPQ9NWS1 RN7SKP289-201ENST00000517244 295 ntBASIC3.19□□□□□ -1.9
PARPBPQ9NWS1 MTND5P41-201ENST00000517498 206 ntBASIC3.19□□□□□ -1.9
PARPBPQ9NWS1 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.19□□□□□ -1.9
PARPBPQ9NWS1 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.19□□□□□ -1.9
PARPBPQ9NWS1 AC055872.1-201ENST00000570978 278 ntBASIC3.19□□□□□ -1.9
PARPBPQ9NWS1 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.19□□□□□ -1.9
PARPBPQ9NWS1 AL357075.2-201ENST00000614906 189 ntBASIC3.19□□□□□ -1.9
PARPBPQ9NWS1 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
PARPBPQ9NWS1 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PARPBPQ9NWS1 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.19□□□□□ -1.9
PARPBPQ9NWS1 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.19□□□□□ -1.9
PARPBPQ9NWS1 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PARPBPQ9NWS1 PWAR6-201ENST00000552334 4618 ntBASIC3.18□□□□□ -1.9
PARPBPQ9NWS1 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
PARPBPQ9NWS1 AL359854.1-201ENST00000614203 1594 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms