Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
ZCCHC3Q9NUD5 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
ZCCHC3Q9NUD5 SNORD115-3-201ENST00000363100 82 ntBASIC1.95□□□□□ -2.1
ZCCHC3Q9NUD5 Y_RNA.194-201ENST00000363985 102 ntBASIC1.95□□□□□ -2.1
ZCCHC3Q9NUD5 RNU6-743P-201ENST00000364151 106 ntBASIC1.95□□□□□ -2.1
ZCCHC3Q9NUD5 RNU4-66P-201ENST00000365199 138 ntBASIC1.95□□□□□ -2.1
ZCCHC3Q9NUD5 Y_RNA.378-201ENST00000365652 113 ntBASIC1.95□□□□□ -2.1
ZCCHC3Q9NUD5 Y_RNA.559-201ENST00000384686 107 ntBASIC1.95□□□□□ -2.1
ZCCHC3Q9NUD5 SNORD73A-201ENST00000386062 65 ntBASIC1.95□□□□□ -2.1
ZCCHC3Q9NUD5 BTF3L4P2-201ENST00000392798 346 ntBASIC1.95□□□□□ -2.1
ZCCHC3Q9NUD5 AL512604.1-201ENST00000404812 257 ntBASIC1.95□□□□□ -2.1
ZCCHC3Q9NUD5 MTCYBP2-201ENST00000407745 171 ntBASIC1.95□□□□□ -2.1
ZCCHC3Q9NUD5 MIR1283-2-201ENST00000408621 87 ntBASIC1.95□□□□□ -2.1
ZCCHC3Q9NUD5 AP000275.1-201ENST00000411943 390 ntBASIC1.95□□□□□ -2.1
ZCCHC3Q9NUD5 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.95□□□□□ -2.1
ZCCHC3Q9NUD5 TIMM9P3-201ENST00000428659 274 ntBASIC1.95□□□□□ -2.1
ZCCHC3Q9NUD5 AL356320.1-201ENST00000429616 163 ntBASIC1.95□□□□□ -2.1
ZCCHC3Q9NUD5 RPL23AP7-203ENST00000449021 469 ntBASIC1.95□□□□□ -2.1
ZCCHC3Q9NUD5 RPL23AP3-201ENST00000453844 468 ntBASIC1.95□□□□□ -2.1
ZCCHC3Q9NUD5 RNU6-717P-201ENST00000459076 104 ntBASIC1.95□□□□□ -2.1
ZCCHC3Q9NUD5 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.95□□□□□ -2.1
ZCCHC3Q9NUD5 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.95□□□□□ -2.1
ZCCHC3Q9NUD5 RNU6-1038P-201ENST00000516516 104 ntBASIC1.95□□□□□ -2.1
ZCCHC3Q9NUD5 Y_RNA.693-201ENST00000516641 110 ntBASIC1.95□□□□□ -2.1
ZCCHC3Q9NUD5 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.95□□□□□ -2.1
ZCCHC3Q9NUD5 AC007375.1-201ENST00000554513 578 ntBASIC1.95□□□□□ -2.1
ZCCHC3Q9NUD5 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.95□□□□□ -2.1
ZCCHC3Q9NUD5 AL450472.1-202ENST00000637286 180 ntBASIC1.95□□□□□ -2.1
ZCCHC3Q9NUD5 CENPCP1-201ENST00000533085 2578 ntBASIC1.95□□□□□ -2.1
ZCCHC3Q9NUD5 AC009487.4-201ENST00000624969 3585 ntBASIC1.94□□□□□ -2.1
ZCCHC3Q9NUD5 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.94□□□□□ -2.1
ZCCHC3Q9NUD5 AC008555.8-201ENST00000623602 2168 ntBASIC1.94□□□□□ -2.1
ZCCHC3Q9NUD5 RNU4-24P-201ENST00000364565 139 ntBASIC1.94□□□□□ -2.1
ZCCHC3Q9NUD5 RNU4-56P-201ENST00000364700 142 ntBASIC1.94□□□□□ -2.1
ZCCHC3Q9NUD5 RNA5SP160-201ENST00000364866 120 ntBASIC1.94□□□□□ -2.1
ZCCHC3Q9NUD5 SNORA12-201ENST00000391162 147 ntBASIC1.94□□□□□ -2.1
ZCCHC3Q9NUD5 AL135786.1-201ENST00000415892 214 ntBASIC1.94□□□□□ -2.1
ZCCHC3Q9NUD5 HMGN2P38-201ENST00000423806 265 ntBASIC1.94□□□□□ -2.1
ZCCHC3Q9NUD5 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.94□□□□□ -2.1
ZCCHC3Q9NUD5 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.94□□□□□ -2.1
ZCCHC3Q9NUD5 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.94□□□□□ -2.1
ZCCHC3Q9NUD5 Y_RNA.654-201ENST00000497848 106 ntBASIC1.94□□□□□ -2.1
ZCCHC3Q9NUD5 AC016632.1-201ENST00000503994 196 ntBASIC1.94□□□□□ -2.1
ZCCHC3Q9NUD5 AC093259.1-201ENST00000509755 300 ntBASIC1.94□□□□□ -2.1
ZCCHC3Q9NUD5 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.94□□□□□ -2.1
ZCCHC3Q9NUD5 AC091874.1-201ENST00000511402 339 ntBASIC1.94□□□□□ -2.1
ZCCHC3Q9NUD5 AC008413.1-201ENST00000511864 177 ntBASIC1.94□□□□□ -2.1
ZCCHC3Q9NUD5 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.94□□□□□ -2.1
ZCCHC3Q9NUD5 AC087854.1-201ENST00000519706 414 ntBASIC1.94□□□□□ -2.1
ZCCHC3Q9NUD5 AP005597.4-201ENST00000526762 229 ntBASIC1.94□□□□□ -2.1
ZCCHC3Q9NUD5 AP002770.2-201ENST00000543613 532 ntBASIC1.94□□□□□ -2.1
ZCCHC3Q9NUD5 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.94□□□□□ -2.1
ZCCHC3Q9NUD5 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.94□□□□□ -2.1
ZCCHC3Q9NUD5 AC002984.1-201ENST00000591692 448 ntBASIC1.94□□□□□ -2.1
ZCCHC3Q9NUD5 AC078795.3-201ENST00000602913 472 ntBASIC1.94□□□□□ -2.1
ZCCHC3Q9NUD5 AL096840.1-201ENST00000603287 93 ntBASIC1.94□□□□□ -2.1
ZCCHC3Q9NUD5 AL078605.1-201ENST00000603529 500 ntBASIC1.94□□□□□ -2.1
ZCCHC3Q9NUD5 AP000654.2-201ENST00000605633 586 ntBASIC1.94□□□□□ -2.1
ZCCHC3Q9NUD5 MIR6852-201ENST00000621699 66 ntBASIC1.94□□□□□ -2.1
ZCCHC3Q9NUD5 AP006437.1-201ENST00000641440 3685 ntBASIC1.94□□□□□ -2.1
ZCCHC3Q9NUD5 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 MIR449A-201ENST00000362113 91 ntBASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 RNA5SP276-201ENST00000362580 94 ntBASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 RNU6-1164P-201ENST00000364428 107 ntBASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 RNU6-301P-201ENST00000384277 107 ntBASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 SNORA51.11-201ENST00000384442 131 ntBASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 MIR514A2-201ENST00000385131 88 ntBASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 MIR514A3-201ENST00000385132 88 ntBASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 RNU6-1106P-201ENST00000390845 107 ntBASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 RNA5SP465-201ENST00000391195 109 ntBASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 RNA5SP201-201ENST00000410316 124 ntBASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 BX510359.4-201ENST00000423750 193 ntBASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 MTND2P29-201ENST00000438595 412 ntBASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 AL353689.1-201ENST00000438895 199 ntBASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 RNU6-1208P-201ENST00000459588 107 ntBASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 AC132942.1-201ENST00000486753 483 ntBASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 AC079804.2-201ENST00000490376 200 ntBASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 MIR4287-201ENST00000579398 78 ntBASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 MIR3923-201ENST00000579521 83 ntBASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 AL109918.3-201ENST00000603072 338 ntBASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 AC080013.6-201ENST00000606185 215 ntBASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 AC103591.3-201ENST00000608684 209 ntBASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 AC092807.2-201ENST00000609367 243 ntBASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 AC068944.2-201ENST00000610373 403 ntBASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 AL627230.6-201ENST00000611129 280 ntBASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 AC091932.3-201ENST00000624223 323 ntBASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
ZCCHC3Q9NUD5 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms