Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.82□□□□□ -2.54
SMCO4Q9NRQ5 RNU6-1210P-201ENST00000363775 107 ntBASIC-0.82□□□□□ -2.54
SMCO4Q9NRQ5 SNORA40.8-201ENST00000411034 126 ntBASIC-0.82□□□□□ -2.54
SMCO4Q9NRQ5 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.82□□□□□ -2.54
SMCO4Q9NRQ5 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC-0.82□□□□□ -2.54
SMCO4Q9NRQ5 AC104332.1-201ENST00000440471 797 ntBASIC-0.82□□□□□ -2.54
SMCO4Q9NRQ5 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.82□□□□□ -2.54
SMCO4Q9NRQ5 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC-0.82□□□□□ -2.54
SMCO4Q9NRQ5 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.82□□□□□ -2.54
SMCO4Q9NRQ5 HMGB1P28-201ENST00000507778 552 ntBASIC-0.82□□□□□ -2.54
SMCO4Q9NRQ5 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC-0.82□□□□□ -2.54
SMCO4Q9NRQ5 SNORD116-30-201ENST00000516468 85 ntBASIC-0.82□□□□□ -2.54
SMCO4Q9NRQ5 AC105185.1-201ENST00000518705 535 ntBASIC-0.82□□□□□ -2.54
SMCO4Q9NRQ5 MIR8076-201ENST00000611401 83 ntBASIC-0.82□□□□□ -2.54
SMCO4Q9NRQ5 uc_338.6-201ENST00000613544 171 ntBASIC-0.82□□□□□ -2.54
SMCO4Q9NRQ5 RNU6-862P-201ENST00000362804 105 ntBASIC-0.83□□□□□ -2.54
SMCO4Q9NRQ5 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.83□□□□□ -2.54
SMCO4Q9NRQ5 C1DP2-201ENST00000418167 426 ntBASIC-0.83□□□□□ -2.54
SMCO4Q9NRQ5 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC-0.83□□□□□ -2.54
SMCO4Q9NRQ5 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.83□□□□□ -2.54
SMCO4Q9NRQ5 C1DP4-201ENST00000455429 424 ntBASIC-0.83□□□□□ -2.54
SMCO4Q9NRQ5 MTCO3P10-201ENST00000455912 772 ntBASIC-0.83□□□□□ -2.54
SMCO4Q9NRQ5 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC-0.83□□□□□ -2.54
SMCO4Q9NRQ5 AC104692.1-201ENST00000472406 90 ntBASIC-0.83□□□□□ -2.54
SMCO4Q9NRQ5 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC-0.83□□□□□ -2.54
SMCO4Q9NRQ5 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC-0.83□□□□□ -2.54
SMCO4Q9NRQ5 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC-0.83□□□□□ -2.54
SMCO4Q9NRQ5 AC080078.2-201ENST00000603766 501 ntBASIC-0.83□□□□□ -2.54
SMCO4Q9NRQ5 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.83□□□□□ -2.54
SMCO4Q9NRQ5 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC-0.83□□□□□ -2.54
SMCO4Q9NRQ5 AC010133.1-201ENST00000615809 842 ntBASIC-0.83□□□□□ -2.54
SMCO4Q9NRQ5 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.84□□□□□ -2.54
SMCO4Q9NRQ5 Y_RNA.597-201ENST00000410463 100 ntBASIC-0.84□□□□□ -2.54
SMCO4Q9NRQ5 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.84□□□□□ -2.54
SMCO4Q9NRQ5 MTCO2P1-201ENST00000424648 477 ntBASIC-0.84□□□□□ -2.54
SMCO4Q9NRQ5 GTF2IP3-201ENST00000433887 494 ntBASIC-0.84□□□□□ -2.54
SMCO4Q9NRQ5 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.84□□□□□ -2.54
SMCO4Q9NRQ5 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC-0.84□□□□□ -2.54
SMCO4Q9NRQ5 AC104136.1-201ENST00000512969 394 ntBASIC-0.84□□□□□ -2.54
SMCO4Q9NRQ5 SUB1P2-201ENST00000556401 297 ntBASIC-0.84□□□□□ -2.54
SMCO4Q9NRQ5 AC136618.2-201ENST00000575091 400 ntBASIC-0.84□□□□□ -2.54
SMCO4Q9NRQ5 AC079610.2-201ENST00000604818 690 ntBASIC-0.84□□□□□ -2.54
SMCO4Q9NRQ5 AC243773.3-201ENST00000613270 256 ntBASIC-0.84□□□□□ -2.54
SMCO4Q9NRQ5 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC-0.84□□□□□ -2.54
SMCO4Q9NRQ5 ENSAP3-201ENST00000312710 333 ntBASIC-0.85□□□□□ -2.55
SMCO4Q9NRQ5 SNORD114-28-201ENST00000363610 72 ntBASIC-0.85□□□□□ -2.55
SMCO4Q9NRQ5 RNU6-756P-201ENST00000383997 107 ntBASIC-0.85□□□□□ -2.55
SMCO4Q9NRQ5 SNORD105-201ENST00000386910 85 ntBASIC-0.85□□□□□ -2.55
SMCO4Q9NRQ5 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.85□□□□□ -2.55
SMCO4Q9NRQ5 AC016909.1-201ENST00000415916 166 ntBASIC-0.85□□□□□ -2.55
SMCO4Q9NRQ5 ARL5AP1-201ENST00000418991 388 ntBASIC-0.85□□□□□ -2.55
SMCO4Q9NRQ5 AC019178.2-201ENST00000423595 505 ntBASIC-0.85□□□□□ -2.55
SMCO4Q9NRQ5 MED13P1-201ENST00000428342 171 ntBASIC-0.85□□□□□ -2.55
SMCO4Q9NRQ5 AC002486.1-201ENST00000435098 391 ntBASIC-0.85□□□□□ -2.55
SMCO4Q9NRQ5 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC-0.85□□□□□ -2.55
SMCO4Q9NRQ5 ELOCP30-201ENST00000447108 299 ntBASIC-0.85□□□□□ -2.55
SMCO4Q9NRQ5 FTH1P25-201ENST00000447665 469 ntBASIC-0.85□□□□□ -2.55
SMCO4Q9NRQ5 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC-0.85□□□□□ -2.55
SMCO4Q9NRQ5 MTND5P13-201ENST00000513046 1079 ntBASIC-0.85□□□□□ -2.55
SMCO4Q9NRQ5 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-0.85□□□□□ -2.55
SMCO4Q9NRQ5 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC-0.85□□□□□ -2.55
SMCO4Q9NRQ5 AC008127.2-201ENST00000549925 1075 ntBASIC-0.85□□□□□ -2.55
SMCO4Q9NRQ5 AC092325.1-201ENST00000566449 554 ntBASIC-0.85□□□□□ -2.55
SMCO4Q9NRQ5 MIR4645-201ENST00000583158 77 ntBASIC-0.85□□□□□ -2.55
SMCO4Q9NRQ5 AL391001.1-201ENST00000602747 715 ntBASIC-0.85□□□□□ -2.55
SMCO4Q9NRQ5 LINC00216-201ENST00000623548 1126 ntBASIC-0.85□□□□□ -2.55
SMCO4Q9NRQ5 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC-0.86□□□□□ -2.55
SMCO4Q9NRQ5 SNORD14C-201ENST00000365382 88 ntBASIC-0.86□□□□□ -2.55
SMCO4Q9NRQ5 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.86□□□□□ -2.55
SMCO4Q9NRQ5 AC123900.1-201ENST00000420390 96 ntBASIC-0.86□□□□□ -2.55
SMCO4Q9NRQ5 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.86□□□□□ -2.55
SMCO4Q9NRQ5 MTCYBP10-201ENST00000424905 650 ntBASIC-0.86□□□□□ -2.55
SMCO4Q9NRQ5 RPL39P39-201ENST00000455840 151 ntBASIC-0.86□□□□□ -2.55
SMCO4Q9NRQ5 HMGN1P10-201ENST00000474557 553 ntBASIC-0.86□□□□□ -2.55
SMCO4Q9NRQ5 AC122134.1-202ENST00000569111 1201 ntBASIC-0.86□□□□□ -2.55
SMCO4Q9NRQ5 AC131055.1-201ENST00000584626 316 ntBASIC-0.86□□□□□ -2.55
SMCO4Q9NRQ5 AL158211.4-201ENST00000606988 584 ntBASIC-0.86□□□□□ -2.55
SMCO4Q9NRQ5 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.86□□□□□ -2.55
SMCO4Q9NRQ5 AL163051.2-201ENST00000618976 735 ntBASIC-0.86□□□□□ -2.55
SMCO4Q9NRQ5 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-0.87□□□□□ -2.55
SMCO4Q9NRQ5 RNU6-1167P-201ENST00000363227 94 ntBASIC-0.87□□□□□ -2.55
SMCO4Q9NRQ5 SUGT1P1-201ENST00000379514 476 ntBASIC-0.87□□□□□ -2.55
SMCO4Q9NRQ5 AC068533.2-201ENST00000411872 306 ntBASIC-0.87□□□□□ -2.55
SMCO4Q9NRQ5 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC-0.87□□□□□ -2.55
SMCO4Q9NRQ5 GPM6BP2-201ENST00000432046 144 ntBASIC-0.87□□□□□ -2.55
SMCO4Q9NRQ5 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC-0.87□□□□□ -2.55
SMCO4Q9NRQ5 GPM6BP1-201ENST00000446387 144 ntBASIC-0.87□□□□□ -2.55
SMCO4Q9NRQ5 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.87□□□□□ -2.55
SMCO4Q9NRQ5 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC-0.87□□□□□ -2.55
SMCO4Q9NRQ5 AC112206.3-201ENST00000514578 389 ntBASIC-0.87□□□□□ -2.55
SMCO4Q9NRQ5 MTND4LP26-201ENST00000518144 282 ntBASIC-0.87□□□□□ -2.55
SMCO4Q9NRQ5 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC-0.87□□□□□ -2.55
SMCO4Q9NRQ5 AC011712.1-201ENST00000588959 234 ntBASIC-0.87□□□□□ -2.55
SMCO4Q9NRQ5 VN1R83P-201ENST00000595685 445 ntBASIC-0.87□□□□□ -2.55
SMCO4Q9NRQ5 AC005176.2-201ENST00000596933 147 ntBASIC-0.87□□□□□ -2.55
SMCO4Q9NRQ5 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC-0.87□□□□□ -2.55
SMCO4Q9NRQ5 U6.99-201ENST00000637524 83 ntBASIC-0.87□□□□□ -2.55
SMCO4Q9NRQ5 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.88□□□□□ -2.55
SMCO4Q9NRQ5 MIR340-201ENST00000362125 95 ntBASIC-0.88□□□□□ -2.55
SMCO4Q9NRQ5 SNORD114-31-201ENST00000363219 75 ntBASIC-0.88□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms