Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.38□□□□□ -2.19
EXOSC4Q9NPD3 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.38□□□□□ -2.19
EXOSC4Q9NPD3 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.38□□□□□ -2.19
EXOSC4Q9NPD3 AL391840.1-201ENST00000571144 367 ntBASIC1.38□□□□□ -2.19
EXOSC4Q9NPD3 MTATP6P3-201ENST00000581686 676 ntBASIC1.38□□□□□ -2.19
EXOSC4Q9NPD3 AC011494.1-201ENST00000596454 237 ntBASIC1.38□□□□□ -2.19
EXOSC4Q9NPD3 MIR8081-201ENST00000611533 95 ntBASIC1.38□□□□□ -2.19
EXOSC4Q9NPD3 AL158063.1-201ENST00000615349 536 ntBASIC1.38□□□□□ -2.19
EXOSC4Q9NPD3 AC241585.2-209ENST00000638217 143 ntBASIC1.38□□□□□ -2.19
EXOSC4Q9NPD3 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.38□□□□□ -2.19
EXOSC4Q9NPD3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 RNU4-15P-201ENST00000362613 141 ntBASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 RNU6-1285P-201ENST00000363480 105 ntBASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 RNU1-42P-201ENST00000364033 160 ntBASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 SNORA75-201ENST00000384158 137 ntBASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 SNORD116-8-201ENST00000384365 95 ntBASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 RNU6-434P-201ENST00000384376 107 ntBASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 RNU6-606P-201ENST00000384721 111 ntBASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 MIR29B2-201ENST00000385055 81 ntBASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 RNU6-955P-201ENST00000410497 104 ntBASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 AL031274.1-201ENST00000450334 232 ntBASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 AL513124.1-201ENST00000450410 614 ntBASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 AC022364.2-201ENST00000457963 554 ntBASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 AC098862.1-201ENST00000504991 413 ntBASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 ARL2BPP4-201ENST00000506854 471 ntBASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 LRRC34P2-201ENST00000514850 553 ntBASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 SNORA25.15-201ENST00000516487 89 ntBASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 RN7SKP219-201ENST00000516825 296 ntBASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 COPS8P3-201ENST00000526024 482 ntBASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 AC103996.1-201ENST00000555468 102 ntBASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 AC008088.1-201ENST00000580993 280 ntBASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 AC087752.4-201ENST00000605911 462 ntBASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 AC025754.2-201ENST00000606491 432 ntBASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
EXOSC4Q9NPD3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
EXOSC4Q9NPD3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
EXOSC4Q9NPD3 RNU6-827P-201ENST00000365553 106 ntBASIC1.36□□□□□ -2.19
EXOSC4Q9NPD3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
EXOSC4Q9NPD3 RNU6-338P-201ENST00000383888 105 ntBASIC1.36□□□□□ -2.19
EXOSC4Q9NPD3 RNU6-43P-201ENST00000384302 107 ntBASIC1.36□□□□□ -2.19
EXOSC4Q9NPD3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
EXOSC4Q9NPD3 RNU6-903P-201ENST00000391270 109 ntBASIC1.36□□□□□ -2.19
EXOSC4Q9NPD3 MIR934-201ENST00000401241 83 ntBASIC1.36□□□□□ -2.19
EXOSC4Q9NPD3 RNU6-1245P-201ENST00000411130 106 ntBASIC1.36□□□□□ -2.19
EXOSC4Q9NPD3 MTATP6P18-201ENST00000417994 673 ntBASIC1.36□□□□□ -2.19
EXOSC4Q9NPD3 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.36□□□□□ -2.19
EXOSC4Q9NPD3 AC010975.2-201ENST00000427781 588 ntBASIC1.36□□□□□ -2.19
EXOSC4Q9NPD3 CETN4P-201ENST00000432407 469 ntBASIC1.36□□□□□ -2.19
EXOSC4Q9NPD3 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.36□□□□□ -2.19
EXOSC4Q9NPD3 AC079382.1-201ENST00000493346 557 ntBASIC1.36□□□□□ -2.19
EXOSC4Q9NPD3 AC093259.1-201ENST00000509755 300 ntBASIC1.36□□□□□ -2.19
EXOSC4Q9NPD3 MTND3P5-201ENST00000512798 333 ntBASIC1.36□□□□□ -2.19
EXOSC4Q9NPD3 MTCO2P4-201ENST00000517968 247 ntBASIC1.36□□□□□ -2.19
EXOSC4Q9NPD3 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.36□□□□□ -2.19
EXOSC4Q9NPD3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.36□□□□□ -2.19
EXOSC4Q9NPD3 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.36□□□□□ -2.19
EXOSC4Q9NPD3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
EXOSC4Q9NPD3 Z69908.1-201ENST00000622603 247 ntBASIC1.36□□□□□ -2.19
EXOSC4Q9NPD3 AC006026.1-201ENST00000444025 1803 ntBASIC1.36□□□□□ -2.19
EXOSC4Q9NPD3 AC245060.5-201ENST00000610778 3293 ntBASIC1.35□□□□□ -2.19
EXOSC4Q9NPD3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
EXOSC4Q9NPD3 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
EXOSC4Q9NPD3 MIR424-201ENST00000362227 98 ntBASIC1.35□□□□□ -2.19
EXOSC4Q9NPD3 RNU1-58P-201ENST00000362413 163 ntBASIC1.35□□□□□ -2.19
EXOSC4Q9NPD3 RNU6-552P-201ENST00000362869 119 ntBASIC1.35□□□□□ -2.19
EXOSC4Q9NPD3 RNU6-266P-201ENST00000364225 107 ntBASIC1.35□□□□□ -2.19
EXOSC4Q9NPD3 AL627390.1-201ENST00000396055 340 ntBASIC1.35□□□□□ -2.19
EXOSC4Q9NPD3 AF228730.1-201ENST00000397972 663 ntBASIC1.35□□□□□ -2.19
EXOSC4Q9NPD3 RNU2-29P-201ENST00000410423 189 ntBASIC1.35□□□□□ -2.19
EXOSC4Q9NPD3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.35□□□□□ -2.19
EXOSC4Q9NPD3 MTCO1P19-201ENST00000443487 500 ntBASIC1.35□□□□□ -2.19
EXOSC4Q9NPD3 SNRPFP3-201ENST00000457792 225 ntBASIC1.35□□□□□ -2.19
EXOSC4Q9NPD3 RNU6-956P-201ENST00000458868 103 ntBASIC1.35□□□□□ -2.19
EXOSC4Q9NPD3 AC145146.1-201ENST00000496370 254 ntBASIC1.35□□□□□ -2.19
EXOSC4Q9NPD3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.35□□□□□ -2.19
EXOSC4Q9NPD3 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.35□□□□□ -2.19
EXOSC4Q9NPD3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.35□□□□□ -2.19
EXOSC4Q9NPD3 SNORA31.16-201ENST00000516773 139 ntBASIC1.35□□□□□ -2.19
EXOSC4Q9NPD3 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.35□□□□□ -2.19
EXOSC4Q9NPD3 AC018630.3-201ENST00000542637 96 ntBASIC1.35□□□□□ -2.19
EXOSC4Q9NPD3 RSL24D1P11-201ENST00000591045 491 ntBASIC1.35□□□□□ -2.19
EXOSC4Q9NPD3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms