Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
UPF2Q9HAU5 RNU6-562P-201ENST00000362731 107 ntBASIC2.6□□□□□ -1.99
UPF2Q9HAU5 Y_RNA.67-201ENST00000362870 100 ntBASIC2.6□□□□□ -1.99
UPF2Q9HAU5 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
UPF2Q9HAU5 SET-203ENST00000372688 801 ntTSL 2 BASIC2.6□□□□□ -1.99
UPF2Q9HAU5 RNU2-49P-201ENST00000410666 184 ntBASIC2.6□□□□□ -1.99
UPF2Q9HAU5 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.6□□□□□ -1.99
UPF2Q9HAU5 AL117339.3-201ENST00000418733 162 ntBASIC2.6□□□□□ -1.99
UPF2Q9HAU5 Y_RNA.632-201ENST00000459189 102 ntBASIC2.6□□□□□ -1.99
UPF2Q9HAU5 SNORA59A-201ENST00000459326 152 ntBASIC2.6□□□□□ -1.99
UPF2Q9HAU5 RPL39P5-202ENST00000512505 151 ntBASIC2.6□□□□□ -1.99
UPF2Q9HAU5 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.6□□□□□ -1.99
UPF2Q9HAU5 SNORD53-201ENST00000579969 78 ntBASIC2.6□□□□□ -1.99
UPF2Q9HAU5 AL050343.2-201ENST00000607338 280 ntBASIC2.6□□□□□ -1.99
UPF2Q9HAU5 MIR6840-201ENST00000611937 71 ntBASIC2.6□□□□□ -1.99
UPF2Q9HAU5 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.6□□□□□ -1.99
UPF2Q9HAU5 AC073544.1-201ENST00000600110 1595 ntBASIC2.6□□□□□ -1.99
UPF2Q9HAU5 MTND4P29-201ENST00000503122 1372 ntBASIC2.6□□□□□ -1.99
UPF2Q9HAU5 CDC27P3-201ENST00000635418 1910 ntBASIC2.6□□□□□ -1.99
UPF2Q9HAU5 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
UPF2Q9HAU5 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
UPF2Q9HAU5 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
UPF2Q9HAU5 RNU6-428P-201ENST00000362942 107 ntBASIC2.59□□□□□ -1.99
UPF2Q9HAU5 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
UPF2Q9HAU5 RNU6-128P-201ENST00000383976 107 ntBASIC2.59□□□□□ -1.99
UPF2Q9HAU5 RNU6-1013P-201ENST00000384180 107 ntBASIC2.59□□□□□ -1.99
UPF2Q9HAU5 Y_RNA.473-201ENST00000384333 102 ntBASIC2.59□□□□□ -1.99
UPF2Q9HAU5 RNU6-1304P-201ENST00000411374 106 ntBASIC2.59□□□□□ -1.99
UPF2Q9HAU5 NDUFS5P4-201ENST00000412983 318 ntBASIC2.59□□□□□ -1.99
UPF2Q9HAU5 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.59□□□□□ -1.99
UPF2Q9HAU5 FABP5P14-201ENST00000437273 393 ntBASIC2.59□□□□□ -1.99
UPF2Q9HAU5 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.59□□□□□ -1.99
UPF2Q9HAU5 HMGN2P10-201ENST00000448085 265 ntBASIC2.59□□□□□ -1.99
UPF2Q9HAU5 AC013470.1-201ENST00000453438 462 ntBASIC2.59□□□□□ -1.99
UPF2Q9HAU5 AC130509.1-201ENST00000464158 433 ntBASIC2.59□□□□□ -1.99
UPF2Q9HAU5 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.59□□□□□ -1.99
UPF2Q9HAU5 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.59□□□□□ -1.99
UPF2Q9HAU5 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.59□□□□□ -1.99
UPF2Q9HAU5 AC005668.1-201ENST00000571142 476 ntBASIC2.59□□□□□ -1.99
UPF2Q9HAU5 MIR4782-201ENST00000577987 79 ntBASIC2.59□□□□□ -1.99
UPF2Q9HAU5 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.59□□□□□ -1.99
UPF2Q9HAU5 AC090616.3-201ENST00000582184 217 ntBASIC2.59□□□□□ -1.99
UPF2Q9HAU5 AL355598.1-201ENST00000604169 202 ntBASIC2.59□□□□□ -1.99
UPF2Q9HAU5 AC113139.1-201ENST00000605049 239 ntBASIC2.59□□□□□ -1.99
UPF2Q9HAU5 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.59□□□□□ -1.99
UPF2Q9HAU5 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.59□□□□□ -1.99
UPF2Q9HAU5 AC098657.3-201ENST00000620434 263 ntBASIC2.59□□□□□ -1.99
UPF2Q9HAU5 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.59□□□□□ -1.99
UPF2Q9HAU5 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.59□□□□□ -2
UPF2Q9HAU5 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
UPF2Q9HAU5 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
UPF2Q9HAU5 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.58□□□□□ -2
UPF2Q9HAU5 ZNF658B-202ENST00000615961 3375 ntBASIC2.58□□□□□ -2
UPF2Q9HAU5 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.58□□□□□ -2
UPF2Q9HAU5 AL596028.1-201ENST00000326971 197 ntBASIC2.58□□□□□ -2
UPF2Q9HAU5 RNA5SP160-201ENST00000364866 120 ntBASIC2.58□□□□□ -2
UPF2Q9HAU5 Y_RNA.419-201ENST00000384041 102 ntBASIC2.58□□□□□ -2
UPF2Q9HAU5 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.58□□□□□ -2
UPF2Q9HAU5 UBE2V1P7-201ENST00000446395 340 ntBASIC2.58□□□□□ -2
UPF2Q9HAU5 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.58□□□□□ -2
UPF2Q9HAU5 MRPL42P6-201ENST00000486397 371 ntBASIC2.58□□□□□ -2
UPF2Q9HAU5 AC079804.2-201ENST00000490376 200 ntBASIC2.58□□□□□ -2
UPF2Q9HAU5 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.58□□□□□ -2
UPF2Q9HAU5 Y_RNA.675-201ENST00000516389 149 ntBASIC2.58□□□□□ -2
UPF2Q9HAU5 SCARNA16.3-201ENST00000516595 184 ntBASIC2.58□□□□□ -2
UPF2Q9HAU5 RNA5SP364-201ENST00000516938 78 ntBASIC2.58□□□□□ -2
UPF2Q9HAU5 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.58□□□□□ -2
UPF2Q9HAU5 APOOP3-201ENST00000536787 586 ntBASIC2.58□□□□□ -2
UPF2Q9HAU5 AC026371.1-201ENST00000551867 419 ntBASIC2.58□□□□□ -2
UPF2Q9HAU5 IMMP1LP2-201ENST00000552954 492 ntBASIC2.58□□□□□ -2
UPF2Q9HAU5 TRAV32-201ENST00000553993 340 ntBASIC2.58□□□□□ -2
UPF2Q9HAU5 LINC00933-203ENST00000559812 219 ntBASIC2.58□□□□□ -2
UPF2Q9HAU5 FRG2DP-202ENST00000566967 323 ntBASIC2.58□□□□□ -2
UPF2Q9HAU5 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.58□□□□□ -2
UPF2Q9HAU5 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.57□□□□□ -2
UPF2Q9HAU5 RNU6-78P-201ENST00000362897 107 ntBASIC2.57□□□□□ -2
UPF2Q9HAU5 RNU6-1059P-201ENST00000363752 98 ntBASIC2.57□□□□□ -2
UPF2Q9HAU5 SNORA68.1-201ENST00000364537 132 ntBASIC2.57□□□□□ -2
UPF2Q9HAU5 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.57□□□□□ -2
UPF2Q9HAU5 RNU6-306P-201ENST00000384617 107 ntBASIC2.57□□□□□ -2
UPF2Q9HAU5 RNA5SP338-201ENST00000410495 85 ntBASIC2.57□□□□□ -2
UPF2Q9HAU5 MTCYBP40-201ENST00000509390 1135 ntBASIC2.57□□□□□ -2
UPF2Q9HAU5 PTP4A1P4-201ENST00000512479 322 ntBASIC2.57□□□□□ -2
UPF2Q9HAU5 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.57□□□□□ -2
UPF2Q9HAU5 RNU6-581P-201ENST00000516214 105 ntBASIC2.57□□□□□ -2
UPF2Q9HAU5 RNA5SP281-201ENST00000516504 135 ntBASIC2.57□□□□□ -2
UPF2Q9HAU5 RNU6-1213P-201ENST00000517075 94 ntBASIC2.57□□□□□ -2
UPF2Q9HAU5 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.57□□□□□ -2
UPF2Q9HAU5 AC069113.1-201ENST00000517763 267 ntBASIC2.57□□□□□ -2
UPF2Q9HAU5 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.57□□□□□ -2
UPF2Q9HAU5 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.57□□□□□ -2
UPF2Q9HAU5 AC021739.1-201ENST00000559631 174 ntBASIC2.57□□□□□ -2
UPF2Q9HAU5 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.57□□□□□ -2
UPF2Q9HAU5 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.57□□□□□ -2
UPF2Q9HAU5 MTND4LP32-201ENST00000636111 270 ntBASIC2.57□□□□□ -2
UPF2Q9HAU5 MIR7515-201ENST00000637837 67 ntBASIC2.57□□□□□ -2
UPF2Q9HAU5 U4.7-201ENST00000638126 106 ntBASIC2.57□□□□□ -2
UPF2Q9HAU5 AC110491.1-201ENST00000562191 2010 ntBASIC2.57□□□□□ -2
UPF2Q9HAU5 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
UPF2Q9HAU5 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms