Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 RNU7-170P-201ENST00000459303 61 ntBASIC3.28□□□□□ -1.88
NELFAQ9H3P2 RPL30P12-201ENST00000474666 353 ntBASIC3.28□□□□□ -1.88
NELFAQ9H3P2 AC097462.2-201ENST00000504623 481 ntBASIC3.28□□□□□ -1.88
NELFAQ9H3P2 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.28□□□□□ -1.88
NELFAQ9H3P2 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.28□□□□□ -1.88
NELFAQ9H3P2 AC107393.1-201ENST00000512403 346 ntBASIC3.28□□□□□ -1.88
NELFAQ9H3P2 Y_RNA.674-201ENST00000516362 113 ntBASIC3.28□□□□□ -1.88
NELFAQ9H3P2 RNU7-110P-201ENST00000516891 62 ntBASIC3.28□□□□□ -1.88
NELFAQ9H3P2 RNU6-1231P-201ENST00000517185 103 ntBASIC3.28□□□□□ -1.88
NELFAQ9H3P2 AC024405.2-202ENST00000532731 184 ntBASIC3.28□□□□□ -1.88
NELFAQ9H3P2 CR383656.8-201ENST00000549046 145 ntBASIC3.28□□□□□ -1.88
NELFAQ9H3P2 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.28□□□□□ -1.88
NELFAQ9H3P2 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.28□□□□□ -1.88
NELFAQ9H3P2 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.28□□□□□ -1.88
NELFAQ9H3P2 AC024220.1-201ENST00000603675 484 ntBASIC3.28□□□□□ -1.88
NELFAQ9H3P2 AC039056.2-201ENST00000622261 511 ntBASIC3.28□□□□□ -1.88
NELFAQ9H3P2 U2.22-201ENST00000636441 106 ntBASIC3.28□□□□□ -1.88
NELFAQ9H3P2 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NELFAQ9H3P2 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.28□□□□□ -1.88
NELFAQ9H3P2 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
NELFAQ9H3P2 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NELFAQ9H3P2 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NELFAQ9H3P2 RNU6-626P-201ENST00000363354 107 ntBASIC3.27□□□□□ -1.89
NELFAQ9H3P2 RNU6-961P-201ENST00000363893 105 ntBASIC3.27□□□□□ -1.89
NELFAQ9H3P2 RNU6-740P-201ENST00000364734 105 ntBASIC3.27□□□□□ -1.89
NELFAQ9H3P2 RNU6-281P-201ENST00000384212 103 ntBASIC3.27□□□□□ -1.89
NELFAQ9H3P2 RNU6-493P-201ENST00000391321 108 ntBASIC3.27□□□□□ -1.89
NELFAQ9H3P2 RN7SKP202-201ENST00000410439 330 ntBASIC3.27□□□□□ -1.89
NELFAQ9H3P2 BPY2DP-201ENST00000422208 265 ntBASIC3.27□□□□□ -1.89
NELFAQ9H3P2 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.27□□□□□ -1.89
NELFAQ9H3P2 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.27□□□□□ -1.89
NELFAQ9H3P2 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.27□□□□□ -1.89
NELFAQ9H3P2 SNORD59.2-201ENST00000516873 68 ntBASIC3.27□□□□□ -1.89
NELFAQ9H3P2 RNU6-58P-201ENST00000517143 103 ntBASIC3.27□□□□□ -1.89
NELFAQ9H3P2 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.27□□□□□ -1.89
NELFAQ9H3P2 AC034105.4-201ENST00000568304 277 ntBASIC3.27□□□□□ -1.89
NELFAQ9H3P2 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.27□□□□□ -1.89
NELFAQ9H3P2 KLKP1-201ENST00000595979 403 ntBASIC3.27□□□□□ -1.89
NELFAQ9H3P2 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.27□□□□□ -1.89
NELFAQ9H3P2 U6.98-201ENST00000637157 84 ntBASIC3.27□□□□□ -1.89
NELFAQ9H3P2 AP000553.6-201ENST00000641242 118 ntBASIC3.27□□□□□ -1.89
NELFAQ9H3P2 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NELFAQ9H3P2 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NELFAQ9H3P2 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
NELFAQ9H3P2 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NELFAQ9H3P2 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NELFAQ9H3P2 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.26□□□□□ -1.89
NELFAQ9H3P2 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
NELFAQ9H3P2 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
NELFAQ9H3P2 Y_RNA.44-201ENST00000362676 108 ntBASIC3.26□□□□□ -1.89
NELFAQ9H3P2 SNORA14A-201ENST00000364773 135 ntBASIC3.26□□□□□ -1.89
NELFAQ9H3P2 RNU6-20P-201ENST00000384106 107 ntBASIC3.26□□□□□ -1.89
NELFAQ9H3P2 RNU6-21P-201ENST00000384710 107 ntBASIC3.26□□□□□ -1.89
NELFAQ9H3P2 MIR329-1-201ENST00000385028 80 ntBASIC3.26□□□□□ -1.89
NELFAQ9H3P2 MIR549A-201ENST00000385268 96 ntBASIC3.26□□□□□ -1.89
NELFAQ9H3P2 MTHFD2P2-201ENST00000407725 247 ntBASIC3.26□□□□□ -1.89
NELFAQ9H3P2 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.26□□□□□ -1.89
NELFAQ9H3P2 AC104332.1-201ENST00000440471 797 ntBASIC3.26□□□□□ -1.89
NELFAQ9H3P2 RPL23AP3-201ENST00000453844 468 ntBASIC3.26□□□□□ -1.89
NELFAQ9H3P2 RPL26P26-201ENST00000480251 434 ntBASIC3.26□□□□□ -1.89
NELFAQ9H3P2 RPL7P47-201ENST00000497299 556 ntBASIC3.26□□□□□ -1.89
NELFAQ9H3P2 SEPT14P8-201ENST00000508026 178 ntBASIC3.26□□□□□ -1.89
NELFAQ9H3P2 SNORA31.21-201ENST00000517180 77 ntBASIC3.26□□□□□ -1.89
NELFAQ9H3P2 RNU1-45P-201ENST00000517191 141 ntBASIC3.26□□□□□ -1.89
NELFAQ9H3P2 SNORD113-5-201ENST00000607261 78 ntBASIC3.26□□□□□ -1.89
NELFAQ9H3P2 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.26□□□□□ -1.89
NELFAQ9H3P2 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
NELFAQ9H3P2 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
NELFAQ9H3P2 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NELFAQ9H3P2 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.26□□□□□ -1.89
NELFAQ9H3P2 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.26□□□□□ -1.89
NELFAQ9H3P2 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.26□□□□□ -1.89
NELFAQ9H3P2 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NELFAQ9H3P2 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NELFAQ9H3P2 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NELFAQ9H3P2 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NELFAQ9H3P2 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
NELFAQ9H3P2 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
NELFAQ9H3P2 ADAM3A-203ENST00000461344 2157 ntBASIC3.25□□□□□ -1.89
NELFAQ9H3P2 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
NELFAQ9H3P2 Y_RNA.569-201ENST00000384749 103 ntBASIC3.25□□□□□ -1.89
NELFAQ9H3P2 RNU6-159P-201ENST00000391080 106 ntBASIC3.25□□□□□ -1.89
NELFAQ9H3P2 SNORA53-201ENST00000391141 249 ntBASIC3.25□□□□□ -1.89
NELFAQ9H3P2 PCNPP3-201ENST00000393579 471 ntBASIC3.25□□□□□ -1.89
NELFAQ9H3P2 AC138623.1-201ENST00000418060 216 ntBASIC3.25□□□□□ -1.89
NELFAQ9H3P2 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.25□□□□□ -1.89
NELFAQ9H3P2 AC005300.1-201ENST00000428401 373 ntBASIC3.25□□□□□ -1.89
NELFAQ9H3P2 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.25□□□□□ -1.89
NELFAQ9H3P2 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.25□□□□□ -1.89
NELFAQ9H3P2 AP000705.1-201ENST00000454567 350 ntBASIC3.25□□□□□ -1.89
NELFAQ9H3P2 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.25□□□□□ -1.89
NELFAQ9H3P2 AC073901.1-201ENST00000462471 408 ntBASIC3.25□□□□□ -1.89
NELFAQ9H3P2 RPL7P49-201ENST00000471402 708 ntBASIC3.25□□□□□ -1.89
NELFAQ9H3P2 MED28P2-201ENST00000475771 317 ntBASIC3.25□□□□□ -1.89
NELFAQ9H3P2 SNORD116-28-201ENST00000516123 91 ntBASIC3.25□□□□□ -1.89
NELFAQ9H3P2 RN7SKP49-201ENST00000516675 260 ntBASIC3.25□□□□□ -1.89
NELFAQ9H3P2 RNU6-567P-201ENST00000516746 107 ntBASIC3.25□□□□□ -1.89
NELFAQ9H3P2 RNU2-31P-201ENST00000516954 155 ntBASIC3.25□□□□□ -1.89
NELFAQ9H3P2 AC087441.2-201ENST00000529141 262 ntBASIC3.25□□□□□ -1.89
NELFAQ9H3P2 AC008011.1-201ENST00000545989 227 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms