Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 MIRLET7D-201ENST00000362263 87 ntBASIC0□□□□□ -2.41
SCAPERQ9BY12 RNU6-1066P-201ENST00000363573 105 ntBASIC0□□□□□ -2.41
SCAPERQ9BY12 Y_RNA.167-201ENST00000363735 109 ntBASIC0□□□□□ -2.41
SCAPERQ9BY12 Y_RNA.234-201ENST00000364409 97 ntBASIC0□□□□□ -2.41
SCAPERQ9BY12 RNU6-487P-201ENST00000365430 104 ntBASIC0□□□□□ -2.41
SCAPERQ9BY12 RAP1BP3-201ENST00000407180 549 ntBASIC0□□□□□ -2.41
SCAPERQ9BY12 TPMTP2-201ENST00000414372 726 ntBASIC0□□□□□ -2.41
SCAPERQ9BY12 COX6CP10-201ENST00000416832 224 ntBASIC0□□□□□ -2.41
SCAPERQ9BY12 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC0□□□□□ -2.41
SCAPERQ9BY12 MTATP6P30-201ENST00000443540 664 ntBASIC0□□□□□ -2.41
SCAPERQ9BY12 AC093809.1-201ENST00000509155 340 ntBASIC0□□□□□ -2.41
SCAPERQ9BY12 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0□□□□□ -2.41
SCAPERQ9BY12 RNU6-572P-201ENST00000516724 80 ntBASIC0□□□□□ -2.41
SCAPERQ9BY12 RN7SKP258-201ENST00000517151 304 ntBASIC0□□□□□ -2.41
SCAPERQ9BY12 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0□□□□□ -2.41
SCAPERQ9BY12 AC126365.2-201ENST00000580630 379 ntBASIC0□□□□□ -2.41
SCAPERQ9BY12 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0□□□□□ -2.41
SCAPERQ9BY12 AP001033.2-201ENST00000609701 1003 ntBASIC0□□□□□ -2.41
SCAPERQ9BY12 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0□□□□□ -2.41
SCAPERQ9BY12 PCMTD1P7-201ENST00000634506 357 ntBASIC0□□□□□ -2.41
SCAPERQ9BY12 snoU2_19.1-201ENST00000362361 80 ntBASIC-0.01□□□□□ -2.41
SCAPERQ9BY12 Y_RNA.363-201ENST00000365529 113 ntBASIC-0.01□□□□□ -2.41
SCAPERQ9BY12 RNU6-950P-201ENST00000384651 107 ntBASIC-0.01□□□□□ -2.41
SCAPERQ9BY12 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
SCAPERQ9BY12 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
SCAPERQ9BY12 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC-0.01□□□□□ -2.41
SCAPERQ9BY12 RPS15AP10-201ENST00000432472 382 ntBASIC-0.01□□□□□ -2.41
SCAPERQ9BY12 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-0.01□□□□□ -2.41
SCAPERQ9BY12 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-0.01□□□□□ -2.41
SCAPERQ9BY12 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-0.01□□□□□ -2.41
SCAPERQ9BY12 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC-0.01□□□□□ -2.41
SCAPERQ9BY12 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC-0.01□□□□□ -2.41
SCAPERQ9BY12 AC009646.1-201ENST00000510455 318 ntBASIC-0.01□□□□□ -2.41
SCAPERQ9BY12 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.01□□□□□ -2.41
SCAPERQ9BY12 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC-0.01□□□□□ -2.41
SCAPERQ9BY12 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC-0.01□□□□□ -2.41
SCAPERQ9BY12 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC-0.01□□□□□ -2.41
SCAPERQ9BY12 AC060771.1-201ENST00000582031 164 ntBASIC-0.01□□□□□ -2.41
SCAPERQ9BY12 AC078795.2-201ENST00000602835 1252 ntBASIC-0.01□□□□□ -2.41
SCAPERQ9BY12 AC021506.2-201ENST00000612354 169 ntBASIC-0.01□□□□□ -2.41
SCAPERQ9BY12 FAM157A-202ENST00000615155 405 ntBASIC-0.01□□□□□ -2.41
SCAPERQ9BY12 AC063943.3-201ENST00000615562 356 ntBASIC-0.01□□□□□ -2.41
SCAPERQ9BY12 Pinc.1-201ENST00000616452 154 ntBASIC-0.01□□□□□ -2.41
SCAPERQ9BY12 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC-0.01□□□□□ -2.41
SCAPERQ9BY12 RNU6-1123P-201ENST00000362347 106 ntBASIC-0.02□□□□□ -2.41
SCAPERQ9BY12 RNU6-923P-201ENST00000364753 107 ntBASIC-0.02□□□□□ -2.41
SCAPERQ9BY12 RNU6-432P-201ENST00000384196 109 ntBASIC-0.02□□□□□ -2.41
SCAPERQ9BY12 SNORD89-201ENST00000390981 114 ntBASIC-0.02□□□□□ -2.41
SCAPERQ9BY12 RNU2-23P-201ENST00000410545 195 ntBASIC-0.02□□□□□ -2.41
SCAPERQ9BY12 UBE2V1P10-201ENST00000414685 269 ntBASIC-0.02□□□□□ -2.41
SCAPERQ9BY12 AC123900.1-201ENST00000420390 96 ntBASIC-0.02□□□□□ -2.41
SCAPERQ9BY12 AL590556.1-201ENST00000423231 483 ntBASIC-0.02□□□□□ -2.41
SCAPERQ9BY12 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC-0.02□□□□□ -2.41
SCAPERQ9BY12 MTCO3P29-201ENST00000432119 779 ntBASIC-0.02□□□□□ -2.41
SCAPERQ9BY12 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC-0.02□□□□□ -2.41
SCAPERQ9BY12 MTND1P30-201ENST00000441241 901 ntBASIC-0.02□□□□□ -2.41
SCAPERQ9BY12 AC069257.2-201ENST00000441819 155 ntBASIC-0.02□□□□□ -2.41
SCAPERQ9BY12 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-0.02□□□□□ -2.41
SCAPERQ9BY12 AC104982.1-201ENST00000478775 574 ntBASIC-0.02□□□□□ -2.41
SCAPERQ9BY12 AC104629.1-201ENST00000494226 508 ntBASIC-0.02□□□□□ -2.41
SCAPERQ9BY12 TMEM251P1-201ENST00000503717 318 ntBASIC-0.02□□□□□ -2.41
SCAPERQ9BY12 RNU6-714P-201ENST00000516963 103 ntBASIC-0.02□□□□□ -2.41
SCAPERQ9BY12 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.02□□□□□ -2.41
SCAPERQ9BY12 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC-0.02□□□□□ -2.41
SCAPERQ9BY12 AP002906.1-201ENST00000603405 233 ntBASIC-0.02□□□□□ -2.41
SCAPERQ9BY12 RAC1P9-201ENST00000604990 392 ntBASIC-0.02□□□□□ -2.41
SCAPERQ9BY12 MIR3976-201ENST00000606807 139 ntBASIC-0.02□□□□□ -2.41
SCAPERQ9BY12 Z99497.1-201ENST00000421282 135 ntBASIC-0.03□□□□□ -2.41
SCAPERQ9BY12 WDR78-207ENST00000488333 613 ntTSL 3 BASIC-0.03□□□□□ -2.41
SCAPERQ9BY12 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC-0.03□□□□□ -2.41
SCAPERQ9BY12 RPL23AP54-201ENST00000495129 419 ntBASIC-0.03□□□□□ -2.41
SCAPERQ9BY12 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.03□□□□□ -2.41
SCAPERQ9BY12 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-0.03□□□□□ -2.41
SCAPERQ9BY12 BNIP3P6-201ENST00000549284 499 ntBASIC-0.03□□□□□ -2.41
SCAPERQ9BY12 BNIP3P30-201ENST00000601184 574 ntBASIC-0.03□□□□□ -2.41
SCAPERQ9BY12 AL031281.1-201ENST00000604049 488 ntBASIC-0.03□□□□□ -2.41
SCAPERQ9BY12 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC-0.03□□□□□ -2.41
SCAPERQ9BY12 AC097372.5-201ENST00000623665 376 ntBASIC-0.03□□□□□ -2.41
SCAPERQ9BY12 SUGT1P1-201ENST00000379514 476 ntBASIC-0.04□□□□□ -2.42
SCAPERQ9BY12 RNU6-622P-201ENST00000384272 103 ntBASIC-0.04□□□□□ -2.42
SCAPERQ9BY12 MIR217-201ENST00000384817 110 ntBASIC-0.04□□□□□ -2.42
SCAPERQ9BY12 SNORD99-201ENST00000408612 74 ntBASIC-0.04□□□□□ -2.42
SCAPERQ9BY12 ELOCP9-201ENST00000418624 239 ntBASIC-0.04□□□□□ -2.42
SCAPERQ9BY12 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC-0.04□□□□□ -2.42
SCAPERQ9BY12 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC-0.04□□□□□ -2.42
SCAPERQ9BY12 OFD1P7Y-201ENST00000454643 1155 ntBASIC-0.04□□□□□ -2.42
SCAPERQ9BY12 AL162395.1-201ENST00000457882 422 ntBASIC-0.04□□□□□ -2.42
SCAPERQ9BY12 RPS26P48-201ENST00000491713 339 ntBASIC-0.04□□□□□ -2.42
SCAPERQ9BY12 HMGB1P30-201ENST00000492455 606 ntBASIC-0.04□□□□□ -2.42
SCAPERQ9BY12 AC024589.1-201ENST00000512207 263 ntBASIC-0.04□□□□□ -2.42
SCAPERQ9BY12 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC-0.04□□□□□ -2.42
SCAPERQ9BY12 AC112206.3-201ENST00000514578 389 ntBASIC-0.04□□□□□ -2.42
SCAPERQ9BY12 SCARNA1-201ENST00000517138 166 ntBASIC-0.04□□□□□ -2.42
SCAPERQ9BY12 AC025627.3-201ENST00000582078 182 ntBASIC-0.04□□□□□ -2.42
SCAPERQ9BY12 AL391001.1-201ENST00000602747 715 ntBASIC-0.04□□□□□ -2.42
SCAPERQ9BY12 AC092354.1-201ENST00000606057 376 ntBASIC-0.04□□□□□ -2.42
SCAPERQ9BY12 AL627230.5-201ENST00000619807 58 ntBASIC-0.04□□□□□ -2.42
SCAPERQ9BY12 uc_338.22-201ENST00000622722 187 ntBASIC-0.04□□□□□ -2.42
SCAPERQ9BY12 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.04□□□□□ -2.42
SCAPERQ9BY12 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms