Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 AC079354.2-201ENST00000453523 154 ntBASIC3.18□□□□□ -1.9
HAPLN3Q96S86 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.18□□□□□ -1.9
HAPLN3Q96S86 RPS29P20-201ENST00000489592 171 ntBASIC3.18□□□□□ -1.9
HAPLN3Q96S86 AK3P2-201ENST00000507976 429 ntBASIC3.18□□□□□ -1.9
HAPLN3Q96S86 SNORA31.1-201ENST00000515993 133 ntBASIC3.18□□□□□ -1.9
HAPLN3Q96S86 SNORA31.5-201ENST00000516190 133 ntBASIC3.18□□□□□ -1.9
HAPLN3Q96S86 Y_RNA.668-201ENST00000516233 93 ntBASIC3.18□□□□□ -1.9
HAPLN3Q96S86 RNU6-612P-201ENST00000516909 102 ntBASIC3.18□□□□□ -1.9
HAPLN3Q96S86 Y_RNA.715-201ENST00000517082 110 ntBASIC3.18□□□□□ -1.9
HAPLN3Q96S86 AC040926.1-201ENST00000530195 238 ntBASIC3.18□□□□□ -1.9
HAPLN3Q96S86 AP000867.2-201ENST00000532468 320 ntBASIC3.18□□□□□ -1.9
HAPLN3Q96S86 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.18□□□□□ -1.9
HAPLN3Q96S86 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.18□□□□□ -1.9
HAPLN3Q96S86 AL451007.1-201ENST00000595491 289 ntBASIC3.18□□□□□ -1.9
HAPLN3Q96S86 AC024153.1-201ENST00000603103 365 ntBASIC3.18□□□□□ -1.9
HAPLN3Q96S86 AC016727.2-201ENST00000603988 621 ntBASIC3.18□□□□□ -1.9
HAPLN3Q96S86 MTND4LP5-201ENST00000605152 292 ntBASIC3.18□□□□□ -1.9
HAPLN3Q96S86 AC004852.3-201ENST00000614131 326 ntBASIC3.18□□□□□ -1.9
HAPLN3Q96S86 ZNF299P-201ENST00000406845 1804 ntBASIC3.18□□□□□ -1.9
HAPLN3Q96S86 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HAPLN3Q96S86 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.18□□□□□ -1.9
HAPLN3Q96S86 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.18□□□□□ -1.9
HAPLN3Q96S86 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
HAPLN3Q96S86 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
HAPLN3Q96S86 RNU6-874P-201ENST00000362390 105 ntBASIC3.17□□□□□ -1.9
HAPLN3Q96S86 RNU6-78P-201ENST00000362897 107 ntBASIC3.17□□□□□ -1.9
HAPLN3Q96S86 RNU6-336P-201ENST00000364891 107 ntBASIC3.17□□□□□ -1.9
HAPLN3Q96S86 SNORA63.7-201ENST00000365579 123 ntBASIC3.17□□□□□ -1.9
HAPLN3Q96S86 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
HAPLN3Q96S86 SNORD67-201ENST00000390833 111 ntBASIC3.17□□□□□ -1.9
HAPLN3Q96S86 RNA5SP494-201ENST00000410653 129 ntBASIC3.17□□□□□ -1.9
HAPLN3Q96S86 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.17□□□□□ -1.9
HAPLN3Q96S86 DYNLT3P2-201ENST00000442517 295 ntBASIC3.17□□□□□ -1.9
HAPLN3Q96S86 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.17□□□□□ -1.9
HAPLN3Q96S86 U8.21-201ENST00000459536 136 ntBASIC3.17□□□□□ -1.9
HAPLN3Q96S86 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.17□□□□□ -1.9
HAPLN3Q96S86 AC021739.1-201ENST00000559631 174 ntBASIC3.17□□□□□ -1.9
HAPLN3Q96S86 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.17□□□□□ -1.9
HAPLN3Q96S86 AC004584.2-201ENST00000570407 410 ntBASIC3.17□□□□□ -1.9
HAPLN3Q96S86 AC006600.1-201ENST00000572529 153 ntBASIC3.17□□□□□ -1.9
HAPLN3Q96S86 MIR4474-201ENST00000579189 78 ntBASIC3.17□□□□□ -1.9
HAPLN3Q96S86 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.17□□□□□ -1.9
HAPLN3Q96S86 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.17□□□□□ -1.9
HAPLN3Q96S86 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HAPLN3Q96S86 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
HAPLN3Q96S86 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
HAPLN3Q96S86 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
HAPLN3Q96S86 MTND5P9-201ENST00000503854 1755 ntBASIC3.17□□□□□ -1.9
HAPLN3Q96S86 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
HAPLN3Q96S86 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.17□□□□□ -1.9
HAPLN3Q96S86 AL035425.3-201ENST00000564206 4996 ntBASIC3.16□□□□□ -1.9
HAPLN3Q96S86 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HAPLN3Q96S86 MIR22-201ENST00000362190 85 ntBASIC3.16□□□□□ -1.9
HAPLN3Q96S86 Y_RNA.26-201ENST00000362539 101 ntBASIC3.16□□□□□ -1.9
HAPLN3Q96S86 RNU6-942P-201ENST00000363002 107 ntBASIC3.16□□□□□ -1.9
HAPLN3Q96S86 Y_RNA.188-201ENST00000363952 111 ntBASIC3.16□□□□□ -1.9
HAPLN3Q96S86 Y_RNA.214-201ENST00000364201 112 ntBASIC3.16□□□□□ -1.9
HAPLN3Q96S86 Y_RNA.222-201ENST00000364264 102 ntBASIC3.16□□□□□ -1.9
HAPLN3Q96S86 RNU1-140P-201ENST00000365040 165 ntBASIC3.16□□□□□ -1.9
HAPLN3Q96S86 Y_RNA.396-201ENST00000383949 103 ntBASIC3.16□□□□□ -1.9
HAPLN3Q96S86 RNU6-198P-201ENST00000384258 104 ntBASIC3.16□□□□□ -1.9
HAPLN3Q96S86 SNORA54-201ENST00000384281 123 ntBASIC3.16□□□□□ -1.9
HAPLN3Q96S86 Y_RNA.500-201ENST00000384466 111 ntBASIC3.16□□□□□ -1.9
HAPLN3Q96S86 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HAPLN3Q96S86 RPS29P13-201ENST00000402041 169 ntBASIC3.16□□□□□ -1.9
HAPLN3Q96S86 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.16□□□□□ -1.9
HAPLN3Q96S86 COTL1P1-201ENST00000422309 375 ntBASIC3.16□□□□□ -1.9
HAPLN3Q96S86 ELOCP20-201ENST00000422460 345 ntBASIC3.16□□□□□ -1.9
HAPLN3Q96S86 HMGN2P20-201ENST00000437531 273 ntBASIC3.16□□□□□ -1.9
HAPLN3Q96S86 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.16□□□□□ -1.9
HAPLN3Q96S86 UQCRHP3-201ENST00000451503 251 ntBASIC3.16□□□□□ -1.9
HAPLN3Q96S86 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.16□□□□□ -1.9
HAPLN3Q96S86 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.16□□□□□ -1.9
HAPLN3Q96S86 RNU7-23P-201ENST00000459465 62 ntBASIC3.16□□□□□ -1.9
HAPLN3Q96S86 AP001486.1-201ENST00000463339 476 ntBASIC3.16□□□□□ -1.9
HAPLN3Q96S86 AL049873.1-201ENST00000480540 376 ntBASIC3.16□□□□□ -1.9
HAPLN3Q96S86 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.16□□□□□ -1.9
HAPLN3Q96S86 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.16□□□□□ -1.9
HAPLN3Q96S86 AC008885.1-201ENST00000514930 301 ntBASIC3.16□□□□□ -1.9
HAPLN3Q96S86 SNORA43.2-201ENST00000516652 128 ntBASIC3.16□□□□□ -1.9
HAPLN3Q96S86 RNU7-4P-201ENST00000516961 62 ntBASIC3.16□□□□□ -1.9
HAPLN3Q96S86 SNORA31.26-201ENST00000517250 137 ntBASIC3.16□□□□□ -1.9
HAPLN3Q96S86 RNU6-794P-201ENST00000517261 64 ntBASIC3.16□□□□□ -1.9
HAPLN3Q96S86 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.16□□□□□ -1.9
HAPLN3Q96S86 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.16□□□□□ -1.9
HAPLN3Q96S86 LARP7P3-201ENST00000579888 337 ntBASIC3.16□□□□□ -1.9
HAPLN3Q96S86 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.16□□□□□ -1.9
HAPLN3Q96S86 AC009318.2-201ENST00000610917 651 ntBASIC3.16□□□□□ -1.9
HAPLN3Q96S86 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.16□□□□□ -1.9
HAPLN3Q96S86 U2.1-201ENST00000618978 145 ntBASIC3.16□□□□□ -1.9
HAPLN3Q96S86 AC007792.1-201ENST00000623023 402 ntBASIC3.16□□□□□ -1.9
HAPLN3Q96S86 AC110774.1-201ENST00000623567 2018 ntBASIC3.15□□□□□ -1.9
HAPLN3Q96S86 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.15□□□□□ -1.9
HAPLN3Q96S86 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
HAPLN3Q96S86 AC007256.1-201ENST00000392253 2765 ntBASIC3.15□□□□□ -1.9
HAPLN3Q96S86 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.15□□□□□ -1.9
HAPLN3Q96S86 MIR422A-201ENST00000362286 90 ntBASIC3.15□□□□□ -1.91
HAPLN3Q96S86 RNU1-100P-201ENST00000365255 165 ntBASIC3.15□□□□□ -1.91
HAPLN3Q96S86 RNU6-708P-201ENST00000384217 107 ntBASIC3.15□□□□□ -1.91
HAPLN3Q96S86 RNU6-784P-201ENST00000384330 106 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms