Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM47Q96LD4 snoU109.2-201ENST00000459316 135 ntBASIC4.8□□□□□ -1.64
TRIM47Q96LD4 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM47Q96LD4 SNORA74D-201ENST00000516404 141 ntBASIC4.8□□□□□ -1.64
TRIM47Q96LD4 SNORA70.24-201ENST00000517233 118 ntBASIC4.8□□□□□ -1.64
TRIM47Q96LD4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.8□□□□□ -1.64
TRIM47Q96LD4 CYP4A43P-201ENST00000568156 121 ntBASIC4.8□□□□□ -1.64
TRIM47Q96LD4 AC096577.2-201ENST00000611455 153 ntBASIC4.8□□□□□ -1.64
TRIM47Q96LD4 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM47Q96LD4 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM47Q96LD4 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM47Q96LD4 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.79□□□□□ -1.64
TRIM47Q96LD4 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM47Q96LD4 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM47Q96LD4 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM47Q96LD4 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM47Q96LD4 Y_RNA.120-201ENST00000363304 110 ntBASIC4.79□□□□□ -1.64
TRIM47Q96LD4 Y_RNA.221-201ENST00000364248 96 ntBASIC4.79□□□□□ -1.64
TRIM47Q96LD4 Y_RNA.281-201ENST00000364774 94 ntBASIC4.79□□□□□ -1.64
TRIM47Q96LD4 RNU6-1336P-201ENST00000383886 109 ntBASIC4.79□□□□□ -1.64
TRIM47Q96LD4 SNORA51.5-201ENST00000384126 131 ntBASIC4.79□□□□□ -1.64
TRIM47Q96LD4 SNORA72.4-201ENST00000384174 132 ntBASIC4.79□□□□□ -1.64
TRIM47Q96LD4 SNORA36C-201ENST00000384289 132 ntBASIC4.79□□□□□ -1.64
TRIM47Q96LD4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TRIM47Q96LD4 AL358075.3-201ENST00000426289 226 ntBASIC4.79□□□□□ -1.64
TRIM47Q96LD4 AL445687.1-201ENST00000439946 251 ntBASIC4.79□□□□□ -1.64
TRIM47Q96LD4 RPL30P12-201ENST00000474666 353 ntBASIC4.79□□□□□ -1.64
TRIM47Q96LD4 RPL23AP70-201ENST00000483361 460 ntBASIC4.79□□□□□ -1.64
TRIM47Q96LD4 AC110768.1-201ENST00000509222 400 ntBASIC4.79□□□□□ -1.64
TRIM47Q96LD4 RN7SKP19-201ENST00000516016 252 ntBASIC4.79□□□□□ -1.64
TRIM47Q96LD4 RNU6ATAC17P-201ENST00000516074 71 ntBASIC4.79□□□□□ -1.64
TRIM47Q96LD4 RNU6-521P-201ENST00000516663 105 ntBASIC4.79□□□□□ -1.64
TRIM47Q96LD4 CYCSP23-201ENST00000519781 313 ntBASIC4.79□□□□□ -1.64
TRIM47Q96LD4 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM47Q96LD4 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM47Q96LD4 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM47Q96LD4 AC015720.1-201ENST00000565251 277 ntBASIC4.79□□□□□ -1.64
TRIM47Q96LD4 CYP4A27P-201ENST00000567218 190 ntBASIC4.79□□□□□ -1.64
TRIM47Q96LD4 AC091178.2-201ENST00000584401 117 ntBASIC4.79□□□□□ -1.64
TRIM47Q96LD4 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM47Q96LD4 BMS1P21-201ENST00000634565 365 ntBASIC4.79□□□□□ -1.64
TRIM47Q96LD4 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.79□□□□□ -1.64
TRIM47Q96LD4 AC009093.8-201ENST00000641769 292 ntBASIC4.79□□□□□ -1.64
TRIM47Q96LD4 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
TRIM47Q96LD4 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM47Q96LD4 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
TRIM47Q96LD4 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
TRIM47Q96LD4 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
TRIM47Q96LD4 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM47Q96LD4 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TRIM47Q96LD4 MIR34B-201ENST00000385076 84 ntBASIC4.78□□□□□ -1.64
TRIM47Q96LD4 MIRLET7F2-201ENST00000385277 83 ntBASIC4.78□□□□□ -1.64
TRIM47Q96LD4 SNORA40C-201ENST00000391285 128 ntBASIC4.78□□□□□ -1.64
TRIM47Q96LD4 U3.40-201ENST00000408706 208 ntBASIC4.78□□□□□ -1.64
TRIM47Q96LD4 SNORA57.3-201ENST00000411095 141 ntBASIC4.78□□□□□ -1.64
TRIM47Q96LD4 CYCSP10-201ENST00000417973 294 ntBASIC4.78□□□□□ -1.64
TRIM47Q96LD4 YPEL5P1-201ENST00000419731 367 ntBASIC4.78□□□□□ -1.64
TRIM47Q96LD4 AC139453.3-201ENST00000493276 369 ntBASIC4.78□□□□□ -1.64
TRIM47Q96LD4 AC108145.1-201ENST00000503770 153 ntBASIC4.78□□□□□ -1.64
TRIM47Q96LD4 RN7SKP43-201ENST00000516173 320 ntBASIC4.78□□□□□ -1.64
TRIM47Q96LD4 SNORA31.19-201ENST00000517079 126 ntBASIC4.78□□□□□ -1.64
TRIM47Q96LD4 AC026403.1-201ENST00000518938 295 ntBASIC4.78□□□□□ -1.64
TRIM47Q96LD4 AC022655.2-201ENST00000577280 318 ntBASIC4.78□□□□□ -1.64
TRIM47Q96LD4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM47Q96LD4 AC006380.1-201ENST00000603598 186 ntBASIC4.78□□□□□ -1.64
TRIM47Q96LD4 AC025166.1-201ENST00000612411 163 ntBASIC4.78□□□□□ -1.64
TRIM47Q96LD4 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM47Q96LD4 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM47Q96LD4 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM47Q96LD4 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM47Q96LD4 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
TRIM47Q96LD4 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM47Q96LD4 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.77□□□□□ -1.65
TRIM47Q96LD4 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM47Q96LD4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM47Q96LD4 RNU6-228P-201ENST00000362700 106 ntBASIC4.77□□□□□ -1.65
TRIM47Q96LD4 RNU6-527P-201ENST00000363425 104 ntBASIC4.77□□□□□ -1.65
TRIM47Q96LD4 Y_RNA.163-201ENST00000363702 113 ntBASIC4.77□□□□□ -1.65
TRIM47Q96LD4 RNU6-647P-201ENST00000364243 107 ntBASIC4.77□□□□□ -1.65
TRIM47Q96LD4 RNY3P5-201ENST00000384127 102 ntBASIC4.77□□□□□ -1.65
TRIM47Q96LD4 RNU6-166P-201ENST00000384371 107 ntBASIC4.77□□□□□ -1.65
TRIM47Q96LD4 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM47Q96LD4 RNU4-43P-201ENST00000410628 137 ntBASIC4.77□□□□□ -1.65
TRIM47Q96LD4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC4.77□□□□□ -1.65
TRIM47Q96LD4 AL691449.1-201ENST00000426570 421 ntBASIC4.77□□□□□ -1.65
TRIM47Q96LD4 AC007560.1-201ENST00000426912 237 ntBASIC4.77□□□□□ -1.65
TRIM47Q96LD4 AC245047.4-201ENST00000433189 144 ntBASIC4.77□□□□□ -1.65
TRIM47Q96LD4 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM47Q96LD4 BX276092.4-201ENST00000452056 248 ntBASIC4.77□□□□□ -1.65
TRIM47Q96LD4 AC018630.3-201ENST00000542637 96 ntBASIC4.77□□□□□ -1.65
TRIM47Q96LD4 PRELID2P1-201ENST00000552837 301 ntBASIC4.77□□□□□ -1.65
TRIM47Q96LD4 LINC00901.1-201ENST00000617252 152 ntBASIC4.77□□□□□ -1.65
TRIM47Q96LD4 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM47Q96LD4 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.77□□□□□ -1.65
TRIM47Q96LD4 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.77□□□□□ -1.65
TRIM47Q96LD4 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.77□□□□□ -1.65
TRIM47Q96LD4 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM47Q96LD4 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
TRIM47Q96LD4 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.76□□□□□ -1.65
TRIM47Q96LD4 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms