Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.12□□□□□ -2.07
RPGRIP1Q96KN7 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.12□□□□□ -2.07
RPGRIP1Q96KN7 AC017083.3-201ENST00000609955 700 ntBASIC2.12□□□□□ -2.07
RPGRIP1Q96KN7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 RNU6-655P-201ENST00000362858 107 ntBASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 RNU6-105P-201ENST00000363909 104 ntBASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 RNU6-457P-201ENST00000363999 107 ntBASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 RNU6-266P-201ENST00000364225 107 ntBASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 Y_RNA.255-201ENST00000364581 97 ntBASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 Y_RNA.399-201ENST00000383955 105 ntBASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 Y_RNA.409-201ENST00000383990 98 ntBASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 AL030996.1-201ENST00000411430 235 ntBASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 AL139156.1-201ENST00000412785 841 ntBASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 SNORD56-201ENST00000413522 71 ntBASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 RNU7-167P-201ENST00000459160 62 ntBASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 snoU13.14-201ENST00000459372 104 ntBASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 AC055731.1-201ENST00000474387 401 ntBASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 RNA5SP445-201ENST00000515889 115 ntBASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 SNORA40.12-201ENST00000516329 111 ntBASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 SNORA48.11-201ENST00000517015 89 ntBASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 AC022880.1-201ENST00000534017 973 ntBASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 IMMP1LP2-201ENST00000552954 492 ntBASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 AC024909.2-201ENST00000553035 286 ntBASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 uc_338.34-201ENST00000617467 174 ntBASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 AC008121.3-201ENST00000618726 433 ntBASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 AC139792.3-201ENST00000623525 224 ntBASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 MIR6863-201ENST00000636112 90 ntBASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
RPGRIP1Q96KN7 RNU1-23P-201ENST00000363361 144 ntBASIC2.1□□□□□ -2.07
RPGRIP1Q96KN7 MIR499A-201ENST00000384903 122 ntBASIC2.1□□□□□ -2.07
RPGRIP1Q96KN7 RNU2-16P-201ENST00000410712 136 ntBASIC2.1□□□□□ -2.07
RPGRIP1Q96KN7 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.1□□□□□ -2.07
RPGRIP1Q96KN7 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.1□□□□□ -2.07
RPGRIP1Q96KN7 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.1□□□□□ -2.07
RPGRIP1Q96KN7 CCDC34P1-201ENST00000507441 517 ntBASIC2.1□□□□□ -2.07
RPGRIP1Q96KN7 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.1□□□□□ -2.07
RPGRIP1Q96KN7 SNORA4.4-201ENST00000515921 135 ntBASIC2.1□□□□□ -2.07
RPGRIP1Q96KN7 RNU6-377P-201ENST00000515965 102 ntBASIC2.1□□□□□ -2.07
RPGRIP1Q96KN7 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.1□□□□□ -2.07
RPGRIP1Q96KN7 AP003034.1-201ENST00000534621 422 ntBASIC2.1□□□□□ -2.07
RPGRIP1Q96KN7 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.1□□□□□ -2.07
RPGRIP1Q96KN7 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.1□□□□□ -2.07
RPGRIP1Q96KN7 AC007229.1-201ENST00000590455 412 ntBASIC2.1□□□□□ -2.07
RPGRIP1Q96KN7 AC080013.6-201ENST00000606185 215 ntBASIC2.1□□□□□ -2.07
RPGRIP1Q96KN7 AP001330.5-201ENST00000607176 411 ntBASIC2.1□□□□□ -2.07
RPGRIP1Q96KN7 AC103591.3-201ENST00000608684 209 ntBASIC2.1□□□□□ -2.07
RPGRIP1Q96KN7 AC022202.1-201ENST00000613515 211 ntBASIC2.1□□□□□ -2.07
RPGRIP1Q96KN7 MIR8070-201ENST00000616510 88 ntBASIC2.1□□□□□ -2.07
RPGRIP1Q96KN7 AL158209.2-201ENST00000619266 216 ntBASIC2.1□□□□□ -2.07
RPGRIP1Q96KN7 AL159153.1-201ENST00000619688 317 ntBASIC2.1□□□□□ -2.07
RPGRIP1Q96KN7 AC068792.1-201ENST00000621354 417 ntBASIC2.1□□□□□ -2.07
RPGRIP1Q96KN7 AC007792.1-201ENST00000623023 402 ntBASIC2.1□□□□□ -2.07
RPGRIP1Q96KN7 OR5AK4P-201ENST00000635912 903 ntBASIC2.1□□□□□ -2.07
RPGRIP1Q96KN7 RNU6-1210P-201ENST00000363775 107 ntBASIC2.09□□□□□ -2.07
RPGRIP1Q96KN7 RNA5SP190-201ENST00000365222 118 ntBASIC2.09□□□□□ -2.07
RPGRIP1Q96KN7 Y_RNA.559-201ENST00000384686 107 ntBASIC2.09□□□□□ -2.07
RPGRIP1Q96KN7 MIR561-201ENST00000385216 97 ntBASIC2.09□□□□□ -2.07
RPGRIP1Q96KN7 MIR676-201ENST00000390702 67 ntBASIC2.09□□□□□ -2.07
RPGRIP1Q96KN7 AL606923.1-201ENST00000406616 190 ntBASIC2.09□□□□□ -2.07
RPGRIP1Q96KN7 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.09□□□□□ -2.07
RPGRIP1Q96KN7 HMGN2P19-201ENST00000425149 265 ntBASIC2.09□□□□□ -2.07
RPGRIP1Q96KN7 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.09□□□□□ -2.07
RPGRIP1Q96KN7 AC027124.2-201ENST00000428249 105 ntBASIC2.09□□□□□ -2.07
RPGRIP1Q96KN7 DNAJC19P4-201ENST00000440115 345 ntBASIC2.09□□□□□ -2.07
RPGRIP1Q96KN7 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.09□□□□□ -2.07
RPGRIP1Q96KN7 RPL39P29-201ENST00000447779 157 ntBASIC2.09□□□□□ -2.07
RPGRIP1Q96KN7 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.09□□□□□ -2.07
RPGRIP1Q96KN7 SNORD13-201ENST00000459299 104 ntBASIC2.09□□□□□ -2.07
RPGRIP1Q96KN7 AC107032.1-201ENST00000485945 480 ntBASIC2.09□□□□□ -2.07
RPGRIP1Q96KN7 AC005840.1-201ENST00000498412 377 ntBASIC2.09□□□□□ -2.07
RPGRIP1Q96KN7 MTND3P5-201ENST00000512798 333 ntBASIC2.09□□□□□ -2.07
RPGRIP1Q96KN7 RNU6-586P-201ENST00000517265 104 ntBASIC2.09□□□□□ -2.07
RPGRIP1Q96KN7 RNU2-19P-201ENST00000517288 84 ntBASIC2.09□□□□□ -2.07
RPGRIP1Q96KN7 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.09□□□□□ -2.07
RPGRIP1Q96KN7 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.09□□□□□ -2.07
RPGRIP1Q96KN7 AC104383.1-201ENST00000530297 370 ntBASIC2.09□□□□□ -2.07
RPGRIP1Q96KN7 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.09□□□□□ -2.07
RPGRIP1Q96KN7 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.09□□□□□ -2.07
RPGRIP1Q96KN7 MIR4424-201ENST00000585257 86 ntBASIC2.09□□□□□ -2.07
RPGRIP1Q96KN7 U2.17-201ENST00000611454 95 ntBASIC2.09□□□□□ -2.07
RPGRIP1Q96KN7 HULC.1-201ENST00000612720 240 ntBASIC2.09□□□□□ -2.07
RPGRIP1Q96KN7 SDR42E1P4-201ENST00000620894 481 ntBASIC2.09□□□□□ -2.07
RPGRIP1Q96KN7 AC090517.3-201ENST00000625170 141 ntBASIC2.09□□□□□ -2.07
RPGRIP1Q96KN7 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.09□□□□□ -2.07
RPGRIP1Q96KN7 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.09□□□□□ -2.08
RPGRIP1Q96KN7 RNU6-428P-201ENST00000362942 107 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms