Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC105137.2-201ENST00000569073 466 ntBASIC3.22□□□□□ -1.89
CDK5RAP3Q96JB5 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.22□□□□□ -1.89
CDK5RAP3Q96JB5 AL158827.2-201ENST00000602494 330 ntBASIC3.22□□□□□ -1.89
CDK5RAP3Q96JB5 MIR1302-2-201ENST00000607096 138 ntBASIC3.22□□□□□ -1.89
CDK5RAP3Q96JB5 AC096772.1-201ENST00000609146 564 ntBASIC3.22□□□□□ -1.89
CDK5RAP3Q96JB5 AL691447.3-201ENST00000635020 330 ntBASIC3.22□□□□□ -1.89
CDK5RAP3Q96JB5 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.22□□□□□ -1.89
CDK5RAP3Q96JB5 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.22□□□□□ -1.89
CDK5RAP3Q96JB5 AC096644.4-201ENST00000563417 2912 ntBASIC3.22□□□□□ -1.89
CDK5RAP3Q96JB5 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.21□□□□□ -1.9
CDK5RAP3Q96JB5 RNU6-784P-201ENST00000384330 106 ntBASIC3.21□□□□□ -1.9
CDK5RAP3Q96JB5 SNORA41-201ENST00000384675 132 ntBASIC3.21□□□□□ -1.9
CDK5RAP3Q96JB5 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.21□□□□□ -1.9
CDK5RAP3Q96JB5 AC243428.1-201ENST00000421099 264 ntBASIC3.21□□□□□ -1.9
CDK5RAP3Q96JB5 AC092427.1-202ENST00000430569 476 ntBASIC3.21□□□□□ -1.9
CDK5RAP3Q96JB5 AC011816.1-201ENST00000441346 546 ntBASIC3.21□□□□□ -1.9
CDK5RAP3Q96JB5 RNU6-264P-201ENST00000517134 104 ntBASIC3.21□□□□□ -1.9
CDK5RAP3Q96JB5 RN7SKP40-201ENST00000517211 242 ntBASIC3.21□□□□□ -1.9
CDK5RAP3Q96JB5 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.21□□□□□ -1.9
CDK5RAP3Q96JB5 HSPE1P4-201ENST00000550617 308 ntBASIC3.21□□□□□ -1.9
CDK5RAP3Q96JB5 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CDK5RAP3Q96JB5 AL356157.2-201ENST00000605122 111 ntBASIC3.21□□□□□ -1.9
CDK5RAP3Q96JB5 AC009318.2-201ENST00000610917 651 ntBASIC3.21□□□□□ -1.9
CDK5RAP3Q96JB5 uc_338.14-201ENST00000613162 166 ntBASIC3.21□□□□□ -1.9
CDK5RAP3Q96JB5 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.21□□□□□ -1.9
CDK5RAP3Q96JB5 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.2□□□□□ -1.9
CDK5RAP3Q96JB5 VTRNA1-1-201ENST00000363120 99 ntBASIC3.2□□□□□ -1.9
CDK5RAP3Q96JB5 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDK5RAP3Q96JB5 XGY1-201ENST00000381172 446 ntBASIC3.2□□□□□ -1.9
CDK5RAP3Q96JB5 RNU6-1227P-201ENST00000383981 107 ntBASIC3.2□□□□□ -1.9
CDK5RAP3Q96JB5 RNU6-1083P-201ENST00000384022 107 ntBASIC3.2□□□□□ -1.9
CDK5RAP3Q96JB5 Y_RNA.445-201ENST00000384168 102 ntBASIC3.2□□□□□ -1.9
CDK5RAP3Q96JB5 NUP35P1-201ENST00000422734 947 ntBASIC3.2□□□□□ -1.9
CDK5RAP3Q96JB5 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.2□□□□□ -1.9
CDK5RAP3Q96JB5 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.2□□□□□ -1.9
CDK5RAP3Q96JB5 AC079354.2-201ENST00000453523 154 ntBASIC3.2□□□□□ -1.9
CDK5RAP3Q96JB5 AC112771.1-201ENST00000463581 102 ntBASIC3.2□□□□□ -1.9
CDK5RAP3Q96JB5 AC068781.1-201ENST00000488231 618 ntBASIC3.2□□□□□ -1.9
CDK5RAP3Q96JB5 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.2□□□□□ -1.9
CDK5RAP3Q96JB5 SNORA31.6-201ENST00000516241 130 ntBASIC3.2□□□□□ -1.9
CDK5RAP3Q96JB5 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.2□□□□□ -1.9
CDK5RAP3Q96JB5 AC074050.1-201ENST00000563247 211 ntBASIC3.2□□□□□ -1.9
CDK5RAP3Q96JB5 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.2□□□□□ -1.9
CDK5RAP3Q96JB5 AC005014.2-201ENST00000607795 599 ntBASIC3.2□□□□□ -1.9
CDK5RAP3Q96JB5 AC007792.1-201ENST00000623023 402 ntBASIC3.2□□□□□ -1.9
CDK5RAP3Q96JB5 AC134503.1-201ENST00000633048 54 ntBASIC3.2□□□□□ -1.9
CDK5RAP3Q96JB5 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.2□□□□□ -1.9
CDK5RAP3Q96JB5 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CDK5RAP3Q96JB5 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDK5RAP3Q96JB5 AL161431.1-201ENST00000618966 4205 ntBASIC3.19□□□□□ -1.9
CDK5RAP3Q96JB5 ZNF299P-201ENST00000406845 1804 ntBASIC3.19□□□□□ -1.9
CDK5RAP3Q96JB5 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDK5RAP3Q96JB5 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.19□□□□□ -1.9
CDK5RAP3Q96JB5 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDK5RAP3Q96JB5 SNORD114-19-201ENST00000363072 75 ntBASIC3.19□□□□□ -1.9
CDK5RAP3Q96JB5 RNU6-1141P-201ENST00000364520 107 ntBASIC3.19□□□□□ -1.9
CDK5RAP3Q96JB5 RNU6-474P-201ENST00000384243 107 ntBASIC3.19□□□□□ -1.9
CDK5RAP3Q96JB5 Y_RNA.504-201ENST00000384481 104 ntBASIC3.19□□□□□ -1.9
CDK5RAP3Q96JB5 MIR181A2-201ENST00000384863 110 ntBASIC3.19□□□□□ -1.9
CDK5RAP3Q96JB5 RPL23AP95-201ENST00000426806 265 ntBASIC3.19□□□□□ -1.9
CDK5RAP3Q96JB5 Z98742.2-201ENST00000431564 187 ntBASIC3.19□□□□□ -1.9
CDK5RAP3Q96JB5 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.19□□□□□ -1.9
CDK5RAP3Q96JB5 RN7SL499P-201ENST00000481141 276 ntBASIC3.19□□□□□ -1.9
CDK5RAP3Q96JB5 RPL36AP48-201ENST00000485521 314 ntBASIC3.19□□□□□ -1.9
CDK5RAP3Q96JB5 AC104564.1-201ENST00000493028 407 ntBASIC3.19□□□□□ -1.9
CDK5RAP3Q96JB5 SNORA25.11-201ENST00000515935 105 ntBASIC3.19□□□□□ -1.9
CDK5RAP3Q96JB5 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.19□□□□□ -1.9
CDK5RAP3Q96JB5 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.19□□□□□ -1.9
CDK5RAP3Q96JB5 MRPS36P4-201ENST00000534436 298 ntBASIC3.19□□□□□ -1.9
CDK5RAP3Q96JB5 AC007375.1-201ENST00000554513 578 ntBASIC3.19□□□□□ -1.9
CDK5RAP3Q96JB5 MIR5696-201ENST00000578474 85 ntBASIC3.19□□□□□ -1.9
CDK5RAP3Q96JB5 MIR3117-201ENST00000584034 78 ntBASIC3.19□□□□□ -1.9
CDK5RAP3Q96JB5 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.19□□□□□ -1.9
CDK5RAP3Q96JB5 AL161756.2-201ENST00000604597 246 ntBASIC3.19□□□□□ -1.9
CDK5RAP3Q96JB5 AC090115.4-201ENST00000609970 188 ntBASIC3.19□□□□□ -1.9
CDK5RAP3Q96JB5 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.19□□□□□ -1.9
CDK5RAP3Q96JB5 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDK5RAP3Q96JB5 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDK5RAP3Q96JB5 AC002543.1-201ENST00000299783 1954 ntBASIC3.19□□□□□ -1.9
CDK5RAP3Q96JB5 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.19□□□□□ -1.9
CDK5RAP3Q96JB5 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDK5RAP3Q96JB5 RNU6-212P-201ENST00000362642 104 ntBASIC3.18□□□□□ -1.9
CDK5RAP3Q96JB5 RNY1P16-201ENST00000363063 111 ntBASIC3.18□□□□□ -1.9
CDK5RAP3Q96JB5 Y_RNA.128-201ENST00000363391 112 ntBASIC3.18□□□□□ -1.9
CDK5RAP3Q96JB5 U3.13-201ENST00000364804 214 ntBASIC3.18□□□□□ -1.9
CDK5RAP3Q96JB5 RNU6-968P-201ENST00000384076 107 ntBASIC3.18□□□□□ -1.9
CDK5RAP3Q96JB5 MIR559-201ENST00000385188 96 ntBASIC3.18□□□□□ -1.9
CDK5RAP3Q96JB5 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CDK5RAP3Q96JB5 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.18□□□□□ -1.9
CDK5RAP3Q96JB5 SNORA11.1-201ENST00000408133 129 ntBASIC3.18□□□□□ -1.9
CDK5RAP3Q96JB5 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.18□□□□□ -1.9
CDK5RAP3Q96JB5 Y_RNA.631-201ENST00000459607 101 ntBASIC3.18□□□□□ -1.9
CDK5RAP3Q96JB5 RPS29P26-201ENST00000477483 171 ntBASIC3.18□□□□□ -1.9
CDK5RAP3Q96JB5 SCARNA13-201ENST00000516672 275 ntBASIC3.18□□□□□ -1.9
CDK5RAP3Q96JB5 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.18□□□□□ -1.9
CDK5RAP3Q96JB5 AC060766.3-201ENST00000591442 263 ntBASIC3.18□□□□□ -1.9
CDK5RAP3Q96JB5 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.18□□□□□ -1.9
CDK5RAP3Q96JB5 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.18□□□□□ -1.9
CDK5RAP3Q96JB5 AC093732.2-201ENST00000607950 274 ntBASIC3.18□□□□□ -1.9
CDK5RAP3Q96JB5 AC007742.2-201ENST00000618226 398 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms