Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AL645944.1-201ENST00000603857 493 ntBASIC3.84□□□□□ -1.79
DDX11Q96FC9 AL162274.2-201ENST00000614406 332 ntBASIC3.84□□□□□ -1.79
DDX11Q96FC9 MIR6076-201ENST00000617521 113 ntBASIC3.84□□□□□ -1.79
DDX11Q96FC9 FTX_2.1-201ENST00000618816 94 ntBASIC3.84□□□□□ -1.79
DDX11Q96FC9 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
DDX11Q96FC9 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
DDX11Q96FC9 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
DDX11Q96FC9 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
DDX11Q96FC9 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
DDX11Q96FC9 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.83□□□□□ -1.8
DDX11Q96FC9 AL391987.6-201ENST00000305671 199 ntBASIC3.83□□□□□ -1.8
DDX11Q96FC9 RNU1-35P-201ENST00000362782 153 ntBASIC3.83□□□□□ -1.8
DDX11Q96FC9 Y_RNA.180-201ENST00000363867 113 ntBASIC3.83□□□□□ -1.8
DDX11Q96FC9 RNU6-336P-201ENST00000364891 107 ntBASIC3.83□□□□□ -1.8
DDX11Q96FC9 SNORA1.3-201ENST00000384676 136 ntBASIC3.83□□□□□ -1.8
DDX11Q96FC9 SNORA12.2-201ENST00000391040 156 ntBASIC3.83□□□□□ -1.8
DDX11Q96FC9 MIR190B-201ENST00000401119 79 ntBASIC3.83□□□□□ -1.8
DDX11Q96FC9 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
DDX11Q96FC9 RPS23P5-201ENST00000495419 428 ntBASIC3.83□□□□□ -1.8
DDX11Q96FC9 SCARNA20.6-201ENST00000517251 106 ntBASIC3.83□□□□□ -1.8
DDX11Q96FC9 SNORA81.3-201ENST00000517283 198 ntBASIC3.83□□□□□ -1.8
DDX11Q96FC9 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.83□□□□□ -1.8
DDX11Q96FC9 AC091144.1-201ENST00000519573 138 ntBASIC3.83□□□□□ -1.8
DDX11Q96FC9 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.83□□□□□ -1.8
DDX11Q96FC9 AC104581.2-201ENST00000572227 430 ntBASIC3.83□□□□□ -1.8
DDX11Q96FC9 AC130289.1-201ENST00000577321 73 ntBASIC3.83□□□□□ -1.8
DDX11Q96FC9 MIR4325-201ENST00000583049 90 ntBASIC3.83□□□□□ -1.8
DDX11Q96FC9 AC006111.3-201ENST00000622137 383 ntBASIC3.83□□□□□ -1.8
DDX11Q96FC9 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
DDX11Q96FC9 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
DDX11Q96FC9 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.83□□□□□ -1.8
DDX11Q96FC9 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
DDX11Q96FC9 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
DDX11Q96FC9 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.82□□□□□ -1.8
DDX11Q96FC9 U3.13-201ENST00000364804 214 ntBASIC3.82□□□□□ -1.8
DDX11Q96FC9 Y_RNA.352-201ENST00000365439 102 ntBASIC3.82□□□□□ -1.8
DDX11Q96FC9 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
DDX11Q96FC9 RPL21P75-201ENST00000396599 483 ntBASIC3.82□□□□□ -1.8
DDX11Q96FC9 RPL21P28-201ENST00000401418 483 ntBASIC3.82□□□□□ -1.8
DDX11Q96FC9 MRPL35P1-201ENST00000404272 572 ntBASIC3.82□□□□□ -1.8
DDX11Q96FC9 RNU4-47P-201ENST00000410876 114 ntBASIC3.82□□□□□ -1.8
DDX11Q96FC9 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.82□□□□□ -1.8
DDX11Q96FC9 AL590556.1-201ENST00000423231 483 ntBASIC3.82□□□□□ -1.8
DDX11Q96FC9 CST9LP2-201ENST00000437612 320 ntBASIC3.82□□□□□ -1.8
DDX11Q96FC9 SNORA59A-201ENST00000459326 152 ntBASIC3.82□□□□□ -1.8
DDX11Q96FC9 RPL21P39-201ENST00000463605 483 ntBASIC3.82□□□□□ -1.8
DDX11Q96FC9 AC087190.1-201ENST00000484462 480 ntBASIC3.82□□□□□ -1.8
DDX11Q96FC9 AC107032.1-201ENST00000485945 480 ntBASIC3.82□□□□□ -1.8
DDX11Q96FC9 AC132942.1-201ENST00000486753 483 ntBASIC3.82□□□□□ -1.8
DDX11Q96FC9 AC093591.1-201ENST00000491435 481 ntBASIC3.82□□□□□ -1.8
DDX11Q96FC9 RPL21P16-201ENST00000495531 483 ntBASIC3.82□□□□□ -1.8
DDX11Q96FC9 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.82□□□□□ -1.8
DDX11Q96FC9 SNORA64.4-201ENST00000516632 81 ntBASIC3.82□□□□□ -1.8
DDX11Q96FC9 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.82□□□□□ -1.8
DDX11Q96FC9 AP002770.2-201ENST00000543613 532 ntBASIC3.82□□□□□ -1.8
DDX11Q96FC9 AC136932.1-201ENST00000574771 208 ntBASIC3.82□□□□□ -1.8
DDX11Q96FC9 AC136601.2-201ENST00000604356 474 ntBASIC3.82□□□□□ -1.8
DDX11Q96FC9 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.82□□□□□ -1.8
DDX11Q96FC9 SCARNA15.3-201ENST00000626315 122 ntBASIC3.82□□□□□ -1.8
DDX11Q96FC9 SCARNA4.1-201ENST00000628597 123 ntBASIC3.82□□□□□ -1.8
DDX11Q96FC9 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC3.82□□□□□ -1.8
DDX11Q96FC9 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.82□□□□□ -1.8
DDX11Q96FC9 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
DDX11Q96FC9 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
DDX11Q96FC9 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
DDX11Q96FC9 SNORD81.1-201ENST00000363064 77 ntBASIC3.81□□□□□ -1.8
DDX11Q96FC9 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.81□□□□□ -1.8
DDX11Q96FC9 RNY3P4-201ENST00000384428 101 ntBASIC3.81□□□□□ -1.8
DDX11Q96FC9 RPS4XP3-201ENST00000398541 413 ntBASIC3.81□□□□□ -1.8
DDX11Q96FC9 RPS29P13-201ENST00000402041 169 ntBASIC3.81□□□□□ -1.8
DDX11Q96FC9 Z82188.1-201ENST00000436709 154 ntBASIC3.81□□□□□ -1.8
DDX11Q96FC9 AL139109.1-201ENST00000455491 297 ntBASIC3.81□□□□□ -1.8
DDX11Q96FC9 PRELID3BP1-201ENST00000457142 540 ntBASIC3.81□□□□□ -1.8
DDX11Q96FC9 AP001486.1-201ENST00000463339 476 ntBASIC3.81□□□□□ -1.8
DDX11Q96FC9 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.81□□□□□ -1.8
DDX11Q96FC9 RNU1-143P-201ENST00000516296 146 ntBASIC3.81□□□□□ -1.8
DDX11Q96FC9 Y_RNA.713-201ENST00000517013 96 ntBASIC3.81□□□□□ -1.8
DDX11Q96FC9 AC068657.1-201ENST00000520807 306 ntBASIC3.81□□□□□ -1.8
DDX11Q96FC9 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.81□□□□□ -1.8
DDX11Q96FC9 HIGD1AP1-201ENST00000550979 275 ntBASIC3.81□□□□□ -1.8
DDX11Q96FC9 MIR4300-201ENST00000581016 96 ntBASIC3.81□□□□□ -1.8
DDX11Q96FC9 U1.23-201ENST00000610293 146 ntBASIC3.81□□□□□ -1.8
DDX11Q96FC9 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.81□□□□□ -1.8
DDX11Q96FC9 RNU1-68P-201ENST00000615382 146 ntBASIC3.81□□□□□ -1.8
DDX11Q96FC9 U1.39-201ENST00000621562 146 ntBASIC3.81□□□□□ -1.8
DDX11Q96FC9 U6.92-201ENST00000636464 89 ntBASIC3.81□□□□□ -1.8
DDX11Q96FC9 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.81□□□□□ -1.8
DDX11Q96FC9 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.81□□□□□ -1.8
DDX11Q96FC9 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.81□□□□□ -1.8
DDX11Q96FC9 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.8□□□□□ -1.8
DDX11Q96FC9 FAM35BP-202ENST00000497389 3337 ntBASIC3.8□□□□□ -1.8
DDX11Q96FC9 RNU6-227P-201ENST00000362865 103 ntBASIC3.8□□□□□ -1.8
DDX11Q96FC9 Y_RNA.123-201ENST00000363338 102 ntBASIC3.8□□□□□ -1.8
DDX11Q96FC9 SNORD56.3-201ENST00000363507 71 ntBASIC3.8□□□□□ -1.8
DDX11Q96FC9 Y_RNA.358-201ENST00000365491 99 ntBASIC3.8□□□□□ -1.8
DDX11Q96FC9 Z98749.2-208ENST00000381646 500 ntBASIC3.8□□□□□ -1.8
DDX11Q96FC9 Y_RNA.405-201ENST00000383979 100 ntBASIC3.8□□□□□ -1.8
DDX11Q96FC9 Y_RNA.451-201ENST00000384200 100 ntBASIC3.8□□□□□ -1.8
DDX11Q96FC9 Y_RNA.524-201ENST00000384564 100 ntBASIC3.8□□□□□ -1.8
DDX11Q96FC9 Y_RNA.561-201ENST00000384694 100 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms