Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
TRIM11Q96F44 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM11Q96F44 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.28□□□□□ -1.72
TRIM11Q96F44 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM11Q96F44 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.28□□□□□ -1.72
TRIM11Q96F44 AC134026.1-201ENST00000623249 2239 ntBASIC4.27□□□□□ -1.73
TRIM11Q96F44 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM11Q96F44 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM11Q96F44 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
TRIM11Q96F44 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM11Q96F44 RNU6-173P-201ENST00000364215 104 ntBASIC4.27□□□□□ -1.73
TRIM11Q96F44 RNU6-643P-201ENST00000384018 107 ntBASIC4.27□□□□□ -1.73
TRIM11Q96F44 MIR616-201ENST00000385293 97 ntBASIC4.27□□□□□ -1.73
TRIM11Q96F44 MIR888-201ENST00000401186 77 ntBASIC4.27□□□□□ -1.73
TRIM11Q96F44 RNA5SP31-201ENST00000411144 127 ntBASIC4.27□□□□□ -1.73
TRIM11Q96F44 HSPE1P12-201ENST00000412576 301 ntBASIC4.27□□□□□ -1.73
TRIM11Q96F44 AL159169.1-201ENST00000421119 127 ntBASIC4.27□□□□□ -1.73
TRIM11Q96F44 RPL21P66-201ENST00000426566 466 ntBASIC4.27□□□□□ -1.73
TRIM11Q96F44 RPL30P12-201ENST00000474666 353 ntBASIC4.27□□□□□ -1.73
TRIM11Q96F44 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
TRIM11Q96F44 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM11Q96F44 RNU6-1007P-201ENST00000516586 107 ntBASIC4.27□□□□□ -1.73
TRIM11Q96F44 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.27□□□□□ -1.73
TRIM11Q96F44 AC083809.1-201ENST00000615051 472 ntBASIC4.27□□□□□ -1.73
TRIM11Q96F44 AL591424.2-201ENST00000617023 128 ntBASIC4.27□□□□□ -1.73
TRIM11Q96F44 AC011944.2-201ENST00000624440 683 ntBASIC4.27□□□□□ -1.73
TRIM11Q96F44 AC068647.2-201ENST00000637380 353 ntBASIC4.27□□□□□ -1.73
TRIM11Q96F44 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM11Q96F44 AC018555.1-201ENST00000567548 1980 ntBASIC4.27□□□□□ -1.73
TRIM11Q96F44 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM11Q96F44 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
TRIM11Q96F44 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM11Q96F44 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM11Q96F44 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM11Q96F44 SNORA31-201ENST00000362607 130 ntBASIC4.26□□□□□ -1.73
TRIM11Q96F44 Y_RNA.179-201ENST00000363844 90 ntBASIC4.26□□□□□ -1.73
TRIM11Q96F44 RNU6-801P-201ENST00000364087 105 ntBASIC4.26□□□□□ -1.73
TRIM11Q96F44 SNORA25.7-201ENST00000364375 127 ntBASIC4.26□□□□□ -1.73
TRIM11Q96F44 MIR585-201ENST00000384887 94 ntBASIC4.26□□□□□ -1.73
TRIM11Q96F44 RNU2-68P-201ENST00000410878 191 ntBASIC4.26□□□□□ -1.73
TRIM11Q96F44 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM11Q96F44 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.26□□□□□ -1.73
TRIM11Q96F44 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM11Q96F44 AL121914.1-201ENST00000450188 156 ntBASIC4.26□□□□□ -1.73
TRIM11Q96F44 HMGB1P22-201ENST00000505315 124 ntBASIC4.26□□□□□ -1.73
TRIM11Q96F44 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM11Q96F44 AC023141.12-201ENST00000512399 199 ntBASIC4.26□□□□□ -1.73
TRIM11Q96F44 RNU6-1256P-201ENST00000516539 103 ntBASIC4.26□□□□□ -1.73
TRIM11Q96F44 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.26□□□□□ -1.73
TRIM11Q96F44 AC136628.3-201ENST00000521868 290 ntBASIC4.26□□□□□ -1.73
TRIM11Q96F44 MIR4284-201ENST00000578924 81 ntBASIC4.26□□□□□ -1.73
TRIM11Q96F44 AC244505.7-201ENST00000599675 272 ntBASIC4.26□□□□□ -1.73
TRIM11Q96F44 AL391813.1-201ENST00000603098 260 ntBASIC4.26□□□□□ -1.73
TRIM11Q96F44 MIR6820-201ENST00000611508 62 ntBASIC4.26□□□□□ -1.73
TRIM11Q96F44 AL391903.3-201ENST00000612158 163 ntBASIC4.26□□□□□ -1.73
TRIM11Q96F44 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.26□□□□□ -1.73
TRIM11Q96F44 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.26□□□□□ -1.73
TRIM11Q96F44 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM11Q96F44 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM11Q96F44 RNU4-10P-201ENST00000364383 140 ntBASIC4.25□□□□□ -1.73
TRIM11Q96F44 SNORA7.2-201ENST00000364446 145 ntBASIC4.25□□□□□ -1.73
TRIM11Q96F44 Y_RNA.293-201ENST00000364908 93 ntBASIC4.25□□□□□ -1.73
TRIM11Q96F44 RNA5SP189-201ENST00000364920 115 ntBASIC4.25□□□□□ -1.73
TRIM11Q96F44 RNU6-915P-201ENST00000364943 103 ntBASIC4.25□□□□□ -1.73
TRIM11Q96F44 RN7SKP284-201ENST00000411002 343 ntBASIC4.25□□□□□ -1.73
TRIM11Q96F44 ELOCP21-201ENST00000412558 336 ntBASIC4.25□□□□□ -1.73
TRIM11Q96F44 AC007919.1-201ENST00000429380 217 ntBASIC4.25□□□□□ -1.73
TRIM11Q96F44 AL356535.1-201ENST00000440335 398 ntBASIC4.25□□□□□ -1.73
TRIM11Q96F44 MTCO1P44-201ENST00000441935 243 ntBASIC4.25□□□□□ -1.73
TRIM11Q96F44 GPM6BP3-201ENST00000442797 145 ntBASIC4.25□□□□□ -1.73
TRIM11Q96F44 RPS23P1-201ENST00000491662 432 ntBASIC4.25□□□□□ -1.73
TRIM11Q96F44 SCARNA8-201ENST00000515924 131 ntBASIC4.25□□□□□ -1.73
TRIM11Q96F44 AP003730.1-201ENST00000524605 285 ntBASIC4.25□□□□□ -1.73
TRIM11Q96F44 AC006380.1-201ENST00000603598 186 ntBASIC4.25□□□□□ -1.73
TRIM11Q96F44 AP002826.1-201ENST00000608835 315 ntBASIC4.25□□□□□ -1.73
TRIM11Q96F44 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.25□□□□□ -1.73
TRIM11Q96F44 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.25□□□□□ -1.73
TRIM11Q96F44 AC099654.7-201ENST00000635788 2127 ntBASIC4.25□□□□□ -1.73
TRIM11Q96F44 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
TRIM11Q96F44 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.25□□□□□ -1.73
TRIM11Q96F44 USP8P1-201ENST00000494673 3183 ntBASIC4.24□□□□□ -1.73
TRIM11Q96F44 UBE3AP2-201ENST00000429033 2259 ntBASIC4.24□□□□□ -1.73
TRIM11Q96F44 Y_RNA.251-201ENST00000364551 99 ntBASIC4.24□□□□□ -1.73
TRIM11Q96F44 RNU6-768P-201ENST00000384683 107 ntBASIC4.24□□□□□ -1.73
TRIM11Q96F44 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
TRIM11Q96F44 SNORA26.5-201ENST00000391215 123 ntBASIC4.24□□□□□ -1.73
TRIM11Q96F44 AL512633.1-201ENST00000399931 655 ntBASIC4.24□□□□□ -1.73
TRIM11Q96F44 AIMP1P2-201ENST00000425294 312 ntBASIC4.24□□□□□ -1.73
TRIM11Q96F44 RPL18P10-201ENST00000425606 538 ntBASIC4.24□□□□□ -1.73
TRIM11Q96F44 HMGB1P37-201ENST00000439613 609 ntBASIC4.24□□□□□ -1.73
TRIM11Q96F44 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.24□□□□□ -1.73
TRIM11Q96F44 AC105137.1-201ENST00000484355 562 ntBASIC4.24□□□□□ -1.73
TRIM11Q96F44 AC016632.1-201ENST00000503994 196 ntBASIC4.24□□□□□ -1.73
TRIM11Q96F44 RNU6-772P-201ENST00000516042 105 ntBASIC4.24□□□□□ -1.73
TRIM11Q96F44 RNU6-453P-201ENST00000516819 85 ntBASIC4.24□□□□□ -1.73
TRIM11Q96F44 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.24□□□□□ -1.73
TRIM11Q96F44 MIR4443-201ENST00000585052 53 ntBASIC4.24□□□□□ -1.73
TRIM11Q96F44 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.24□□□□□ -1.73
TRIM11Q96F44 AL391261.4-201ENST00000616012 481 ntBASIC4.24□□□□□ -1.73
TRIM11Q96F44 MIR3674-201ENST00000636576 68 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms