Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AL034555.1-201ENST00000604816 211 ntBASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 AL357078.3-201ENST00000607528 618 ntBASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 AC104237.2-201ENST00000612456 443 ntBASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 MIR6895-201ENST00000613497 78 ntBASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 AL353997.5-201ENST00000618886 171 ntBASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 YWHAEP7-203ENST00000622054 312 ntBASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 RNU6-82P-201ENST00000363970 107 ntBASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 RNU4-20P-201ENST00000365601 151 ntBASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 RNU6-38P-201ENST00000384085 107 ntBASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 RNU6-483P-201ENST00000384088 108 ntBASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 RNU6-611P-201ENST00000384276 104 ntBASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 RNU6-1215P-201ENST00000384441 102 ntBASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 SNORA41-201ENST00000384675 132 ntBASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 BTF3L4P2-201ENST00000392798 346 ntBASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 RPS29P13-201ENST00000402041 169 ntBASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 ARL5AP1-201ENST00000418991 388 ntBASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 SEPT14P3-201ENST00000439401 183 ntBASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 AL732372.2-207ENST00000445840 183 ntBASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 SEPT14P2-201ENST00000453405 183 ntBASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 RNU6-333P-201ENST00000459117 107 ntBASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 HMGB1P35-201ENST00000503360 598 ntBASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 SEPT14P4-201ENST00000513445 186 ntBASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 Y_RNA.704-201ENST00000516851 102 ntBASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 RNU6-323P-201ENST00000521915 107 ntBASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 FO082796.1-201ENST00000523795 183 ntBASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 AL162413.1-201ENST00000603198 110 ntBASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 AL356157.2-201ENST00000605122 111 ntBASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 AC012557.2-201ENST00000605919 418 ntBASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 U4.5-201ENST00000617137 123 ntBASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 MIR1321-201ENST00000637766 79 ntBASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 AC068137.3-201ENST00000639191 341 ntBASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SNRNP40Q96DI7 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.09□□□□□ -2.07
SNRNP40Q96DI7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SNRNP40Q96DI7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.09□□□□□ -2.07
SNRNP40Q96DI7 RNU6-1285P-201ENST00000363480 105 ntBASIC2.09□□□□□ -2.07
SNRNP40Q96DI7 MIR1294-201ENST00000408503 142 ntBASIC2.09□□□□□ -2.07
SNRNP40Q96DI7 RN7SKP32-201ENST00000410167 303 ntBASIC2.09□□□□□ -2.07
SNRNP40Q96DI7 CBX3P6-201ENST00000430257 527 ntBASIC2.09□□□□□ -2.07
SNRNP40Q96DI7 AC087884.1-201ENST00000469738 328 ntBASIC2.09□□□□□ -2.07
SNRNP40Q96DI7 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.09□□□□□ -2.07
SNRNP40Q96DI7 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.09□□□□□ -2.07
SNRNP40Q96DI7 AC091885.1-201ENST00000506658 268 ntBASIC2.09□□□□□ -2.07
SNRNP40Q96DI7 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SNRNP40Q96DI7 RNU6-1281P-201ENST00000516223 105 ntBASIC2.09□□□□□ -2.07
SNRNP40Q96DI7 RNU6-314P-201ENST00000516574 104 ntBASIC2.09□□□□□ -2.07
SNRNP40Q96DI7 SNORA31.25-201ENST00000517242 134 ntBASIC2.09□□□□□ -2.07
SNRNP40Q96DI7 HSPE1P18-201ENST00000517602 280 ntBASIC2.09□□□□□ -2.07
SNRNP40Q96DI7 AC087854.1-201ENST00000519706 414 ntBASIC2.09□□□□□ -2.07
SNRNP40Q96DI7 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.09□□□□□ -2.07
SNRNP40Q96DI7 TRAV32-201ENST00000553993 340 ntBASIC2.09□□□□□ -2.07
SNRNP40Q96DI7 AL118558.2-201ENST00000556294 238 ntBASIC2.09□□□□□ -2.07
SNRNP40Q96DI7 MIR5007-201ENST00000583098 95 ntBASIC2.09□□□□□ -2.07
SNRNP40Q96DI7 AC060766.3-201ENST00000591442 263 ntBASIC2.09□□□□□ -2.07
SNRNP40Q96DI7 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.09□□□□□ -2.07
SNRNP40Q96DI7 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.09□□□□□ -2.07
SNRNP40Q96DI7 FER-210ENST00000628534 558 ntTSL 5 BASIC2.09□□□□□ -2.07
SNRNP40Q96DI7 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
SNRNP40Q96DI7 AP000560.1-201ENST00000624150 1937 ntBASIC2.09□□□□□ -2.08
SNRNP40Q96DI7 SNORA64-201ENST00000384674 134 ntBASIC2.08□□□□□ -2.08
SNRNP40Q96DI7 AL355497.1-201ENST00000406262 551 ntBASIC2.08□□□□□ -2.08
SNRNP40Q96DI7 AL590002.1-201ENST00000406554 418 ntBASIC2.08□□□□□ -2.08
SNRNP40Q96DI7 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.08□□□□□ -2.08
SNRNP40Q96DI7 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.08□□□□□ -2.08
SNRNP40Q96DI7 AC078809.1-201ENST00000427601 140 ntBASIC2.08□□□□□ -2.08
SNRNP40Q96DI7 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.08□□□□□ -2.08
SNRNP40Q96DI7 AC145146.1-201ENST00000496370 254 ntBASIC2.08□□□□□ -2.08
SNRNP40Q96DI7 Y_RNA.654-201ENST00000497848 106 ntBASIC2.08□□□□□ -2.08
SNRNP40Q96DI7 RPL38P4-201ENST00000502376 214 ntBASIC2.08□□□□□ -2.08
SNRNP40Q96DI7 AC016632.1-201ENST00000503994 196 ntBASIC2.08□□□□□ -2.08
SNRNP40Q96DI7 AC116337.1-201ENST00000509680 687 ntBASIC2.08□□□□□ -2.08
SNRNP40Q96DI7 AC107222.1-201ENST00000510899 637 ntBASIC2.08□□□□□ -2.08
SNRNP40Q96DI7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.08□□□□□ -2.08
SNRNP40Q96DI7 AC233702.2-202ENST00000562547 291 ntBASIC2.08□□□□□ -2.08
SNRNP40Q96DI7 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.08□□□□□ -2.08
SNRNP40Q96DI7 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.08□□□□□ -2.08
SNRNP40Q96DI7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.08□□□□□ -2.08
SNRNP40Q96DI7 AC103705.1-201ENST00000619013 241 ntBASIC2.08□□□□□ -2.08
SNRNP40Q96DI7 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
SNRNP40Q96DI7 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.08□□□□□ -2.08
SNRNP40Q96DI7 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 AC092268.1-201ENST00000342691 405 ntBASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 MIR6073-201ENST00000352083 89 ntBASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 Y_RNA.167-201ENST00000363735 109 ntBASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 RNY3P3-201ENST00000363816 102 ntBASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 Y_RNA.378-201ENST00000365652 113 ntBASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 RNU6-142P-201ENST00000384019 107 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms