Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 Y_RNA.383-201ENST00000383855 97 ntBASIC4.48□□□□□ -1.69
VTI1AQ96AJ9 RNU6-622P-201ENST00000384272 103 ntBASIC4.48□□□□□ -1.69
VTI1AQ96AJ9 AL390729.2-201ENST00000416137 156 ntBASIC4.48□□□□□ -1.69
VTI1AQ96AJ9 AC004552.1-201ENST00000419089 348 ntBASIC4.48□□□□□ -1.69
VTI1AQ96AJ9 AC005300.1-201ENST00000428401 373 ntBASIC4.48□□□□□ -1.69
VTI1AQ96AJ9 POLR2KP2-201ENST00000438155 177 ntBASIC4.48□□□□□ -1.69
VTI1AQ96AJ9 RPS26P3-201ENST00000470205 348 ntBASIC4.48□□□□□ -1.69
VTI1AQ96AJ9 AC090543.2-201ENST00000483963 348 ntBASIC4.48□□□□□ -1.69
VTI1AQ96AJ9 AC004057.1-201ENST00000485827 348 ntBASIC4.48□□□□□ -1.69
VTI1AQ96AJ9 AC025554.1-201ENST00000505641 188 ntBASIC4.48□□□□□ -1.69
VTI1AQ96AJ9 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.48□□□□□ -1.69
VTI1AQ96AJ9 SNORA31.16-201ENST00000516773 139 ntBASIC4.48□□□□□ -1.69
VTI1AQ96AJ9 IGKV2-38-201ENST00000517443 247 ntBASIC4.48□□□□□ -1.69
VTI1AQ96AJ9 AC011602.1-201ENST00000546484 331 ntBASIC4.48□□□□□ -1.69
VTI1AQ96AJ9 AC006199.1-201ENST00000548728 219 ntBASIC4.48□□□□□ -1.69
VTI1AQ96AJ9 AC007179.3-201ENST00000604976 235 ntBASIC4.48□□□□□ -1.69
VTI1AQ96AJ9 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.48□□□□□ -1.69
VTI1AQ96AJ9 AC006001.4-201ENST00000622243 395 ntBASIC4.48□□□□□ -1.69
VTI1AQ96AJ9 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
VTI1AQ96AJ9 ADAM3A-203ENST00000461344 2157 ntBASIC4.48□□□□□ -1.69
VTI1AQ96AJ9 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VTI1AQ96AJ9 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
VTI1AQ96AJ9 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
VTI1AQ96AJ9 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
VTI1AQ96AJ9 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.47□□□□□ -1.69
VTI1AQ96AJ9 RBBP8P1-201ENST00000449447 1844 ntBASIC4.47□□□□□ -1.69
VTI1AQ96AJ9 MIR483-201ENST00000385070 76 ntBASIC4.47□□□□□ -1.69
VTI1AQ96AJ9 MIR549A-201ENST00000385268 96 ntBASIC4.47□□□□□ -1.69
VTI1AQ96AJ9 RNU6-918P-201ENST00000391219 106 ntBASIC4.47□□□□□ -1.69
VTI1AQ96AJ9 SNORA3C-201ENST00000408792 125 ntBASIC4.47□□□□□ -1.69
VTI1AQ96AJ9 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.47□□□□□ -1.69
VTI1AQ96AJ9 AC012306.1-201ENST00000423267 114 ntBASIC4.47□□□□□ -1.69
VTI1AQ96AJ9 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.47□□□□□ -1.69
VTI1AQ96AJ9 ACA59.2-201ENST00000517061 156 ntBASIC4.47□□□□□ -1.69
VTI1AQ96AJ9 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.47□□□□□ -1.69
VTI1AQ96AJ9 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.47□□□□□ -1.69
VTI1AQ96AJ9 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.47□□□□□ -1.69
VTI1AQ96AJ9 AC090897.2-201ENST00000581715 130 ntBASIC4.47□□□□□ -1.69
VTI1AQ96AJ9 AC010999.1-201ENST00000611856 324 ntBASIC4.47□□□□□ -1.69
VTI1AQ96AJ9 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VTI1AQ96AJ9 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VTI1AQ96AJ9 AC110491.1-201ENST00000562191 2010 ntBASIC4.46□□□□□ -1.69
VTI1AQ96AJ9 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.46□□□□□ -1.69
VTI1AQ96AJ9 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
VTI1AQ96AJ9 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.46□□□□□ -1.69
VTI1AQ96AJ9 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VTI1AQ96AJ9 Y_RNA.170-201ENST00000363746 110 ntBASIC4.46□□□□□ -1.7
VTI1AQ96AJ9 RPS26P42-201ENST00000413485 326 ntBASIC4.46□□□□□ -1.7
VTI1AQ96AJ9 AC112220.1-201ENST00000434628 355 ntBASIC4.46□□□□□ -1.7
VTI1AQ96AJ9 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.46□□□□□ -1.7
VTI1AQ96AJ9 AC007395.1-201ENST00000451333 677 ntBASIC4.46□□□□□ -1.7
VTI1AQ96AJ9 SNORD2.1-201ENST00000458762 69 ntBASIC4.46□□□□□ -1.7
VTI1AQ96AJ9 RNA5SP310-201ENST00000459084 116 ntBASIC4.46□□□□□ -1.7
VTI1AQ96AJ9 AC110768.1-201ENST00000509222 400 ntBASIC4.46□□□□□ -1.7
VTI1AQ96AJ9 AC006445.2-201ENST00000510061 472 ntBASIC4.46□□□□□ -1.7
VTI1AQ96AJ9 RNU6-1278P-201ENST00000516130 107 ntBASIC4.46□□□□□ -1.7
VTI1AQ96AJ9 RNY3P16-201ENST00000516338 101 ntBASIC4.46□□□□□ -1.7
VTI1AQ96AJ9 AC026403.1-201ENST00000518938 295 ntBASIC4.46□□□□□ -1.7
VTI1AQ96AJ9 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VTI1AQ96AJ9 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.46□□□□□ -1.7
VTI1AQ96AJ9 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
VTI1AQ96AJ9 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VTI1AQ96AJ9 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VTI1AQ96AJ9 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VTI1AQ96AJ9 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VTI1AQ96AJ9 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VTI1AQ96AJ9 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.45□□□□□ -1.7
VTI1AQ96AJ9 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VTI1AQ96AJ9 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
VTI1AQ96AJ9 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
VTI1AQ96AJ9 RNU6-923P-201ENST00000364753 107 ntBASIC4.45□□□□□ -1.7
VTI1AQ96AJ9 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VTI1AQ96AJ9 SNORA5A-201ENST00000384111 134 ntBASIC4.45□□□□□ -1.7
VTI1AQ96AJ9 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
VTI1AQ96AJ9 RNA5SP390-201ENST00000410191 113 ntBASIC4.45□□□□□ -1.7
VTI1AQ96AJ9 Y_RNA.595-201ENST00000410403 105 ntBASIC4.45□□□□□ -1.7
VTI1AQ96AJ9 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.45□□□□□ -1.7
VTI1AQ96AJ9 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.45□□□□□ -1.7
VTI1AQ96AJ9 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.45□□□□□ -1.7
VTI1AQ96AJ9 RNA5SP54-201ENST00000516951 92 ntBASIC4.45□□□□□ -1.7
VTI1AQ96AJ9 SNORA70.24-201ENST00000517233 118 ntBASIC4.45□□□□□ -1.7
VTI1AQ96AJ9 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.45□□□□□ -1.7
VTI1AQ96AJ9 HMGN2P15-201ENST00000585707 270 ntBASIC4.45□□□□□ -1.7
VTI1AQ96AJ9 MZT1P2-201ENST00000604387 248 ntBASIC4.45□□□□□ -1.7
VTI1AQ96AJ9 AC022441.3-201ENST00000605737 136 ntBASIC4.45□□□□□ -1.7
VTI1AQ96AJ9 AC068831.7-201ENST00000616954 363 ntBASIC4.45□□□□□ -1.7
VTI1AQ96AJ9 AC006111.3-201ENST00000622137 383 ntBASIC4.45□□□□□ -1.7
VTI1AQ96AJ9 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VTI1AQ96AJ9 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VTI1AQ96AJ9 AC073073.2-201ENST00000609827 2578 ntBASIC4.45□□□□□ -1.7
VTI1AQ96AJ9 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VTI1AQ96AJ9 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VTI1AQ96AJ9 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
VTI1AQ96AJ9 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.45□□□□□ -1.7
VTI1AQ96AJ9 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VTI1AQ96AJ9 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.44□□□□□ -1.7
VTI1AQ96AJ9 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.44□□□□□ -1.7
VTI1AQ96AJ9 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.44□□□□□ -1.7
VTI1AQ96AJ9 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
VTI1AQ96AJ9 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms