Protein–RNA interactions for Protein: Q92575

UBXN4, UBX domain-containing protein 4, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4Q92575 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
UBXN4Q92575 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.6□□□□□ -1.83
UBXN4Q92575 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.6□□□□□ -1.83
UBXN4Q92575 RNA5SP125-201ENST00000364843 120 ntBASIC3.6□□□□□ -1.83
UBXN4Q92575 RNU6-378P-201ENST00000384324 107 ntBASIC3.6□□□□□ -1.83
UBXN4Q92575 Y_RNA.577-201ENST00000384794 101 ntBASIC3.6□□□□□ -1.83
UBXN4Q92575 MIR7-3-201ENST00000384898 110 ntBASIC3.6□□□□□ -1.83
UBXN4Q92575 UBA52P6-201ENST00000399822 382 ntBASIC3.6□□□□□ -1.83
UBXN4Q92575 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.6□□□□□ -1.83
UBXN4Q92575 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
UBXN4Q92575 AP000705.1-201ENST00000454567 350 ntBASIC3.6□□□□□ -1.83
UBXN4Q92575 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.6□□□□□ -1.83
UBXN4Q92575 RN7SL75P-201ENST00000461926 281 ntBASIC3.6□□□□□ -1.83
UBXN4Q92575 RPS29P2-201ENST00000479278 136 ntBASIC3.6□□□□□ -1.83
UBXN4Q92575 RNU6-976P-201ENST00000516086 111 ntBASIC3.6□□□□□ -1.83
UBXN4Q92575 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.6□□□□□ -1.83
UBXN4Q92575 EIF4A1P12-201ENST00000551910 141 ntBASIC3.6□□□□□ -1.83
UBXN4Q92575 AC023824.2-201ENST00000566185 400 ntBASIC3.6□□□□□ -1.83
UBXN4Q92575 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.6□□□□□ -1.83
UBXN4Q92575 AL080274.1-201ENST00000605565 220 ntBASIC3.6□□□□□ -1.83
UBXN4Q92575 AC022140.2-201ENST00000623500 188 ntBASIC3.6□□□□□ -1.83
UBXN4Q92575 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
UBXN4Q92575 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
UBXN4Q92575 RNU6-694P-201ENST00000364071 147 ntBASIC3.59□□□□□ -1.83
UBXN4Q92575 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
UBXN4Q92575 MIR320B2-201ENST00000408479 138 ntBASIC3.59□□□□□ -1.83
UBXN4Q92575 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.59□□□□□ -1.83
UBXN4Q92575 AC003685.2-201ENST00000422795 395 ntBASIC3.59□□□□□ -1.83
UBXN4Q92575 MTCO2P12-201ENST00000427426 682 ntBASIC3.59□□□□□ -1.83
UBXN4Q92575 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.59□□□□□ -1.83
UBXN4Q92575 AC099799.1-201ENST00000439809 192 ntBASIC3.59□□□□□ -1.83
UBXN4Q92575 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.59□□□□□ -1.83
UBXN4Q92575 SNORD105B-201ENST00000458770 79 ntBASIC3.59□□□□□ -1.83
UBXN4Q92575 AC083906.5-201ENST00000503722 328 ntBASIC3.59□□□□□ -1.83
UBXN4Q92575 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.59□□□□□ -1.83
UBXN4Q92575 Y_RNA.661-201ENST00000516003 99 ntBASIC3.59□□□□□ -1.83
UBXN4Q92575 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.59□□□□□ -1.83
UBXN4Q92575 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.59□□□□□ -1.83
UBXN4Q92575 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.59□□□□□ -1.83
UBXN4Q92575 AL355802.3-201ENST00000607571 545 ntBASIC3.59□□□□□ -1.83
UBXN4Q92575 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.59□□□□□ -1.83
UBXN4Q92575 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.59□□□□□ -1.83
UBXN4Q92575 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
UBXN4Q92575 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.59□□□□□ -1.84
UBXN4Q92575 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.59□□□□□ -1.84
UBXN4Q92575 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
UBXN4Q92575 MIR369-201ENST00000362155 70 ntBASIC3.58□□□□□ -1.84
UBXN4Q92575 SNORA71.3-201ENST00000362582 128 ntBASIC3.58□□□□□ -1.84
UBXN4Q92575 RNA5SP119-201ENST00000362715 117 ntBASIC3.58□□□□□ -1.84
UBXN4Q92575 Y_RNA.197-201ENST00000364004 102 ntBASIC3.58□□□□□ -1.84
UBXN4Q92575 Y_RNA.813-201ENST00000364639 102 ntBASIC3.58□□□□□ -1.84
UBXN4Q92575 SNORA51.4-201ENST00000364993 124 ntBASIC3.58□□□□□ -1.84
UBXN4Q92575 Y_RNA.319-201ENST00000365138 92 ntBASIC3.58□□□□□ -1.84
UBXN4Q92575 DYNLT3P1-201ENST00000378574 347 ntBASIC3.58□□□□□ -1.84
UBXN4Q92575 Y_RNA.428-201ENST00000384078 102 ntBASIC3.58□□□□□ -1.84
UBXN4Q92575 MIR559-201ENST00000385188 96 ntBASIC3.58□□□□□ -1.84
UBXN4Q92575 ATP5A1P2-201ENST00000412323 255 ntBASIC3.58□□□□□ -1.84
UBXN4Q92575 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.58□□□□□ -1.84
UBXN4Q92575 AC115115.1-201ENST00000449927 248 ntBASIC3.58□□□□□ -1.84
UBXN4Q92575 RNU7-87P-201ENST00000459343 62 ntBASIC3.58□□□□□ -1.84
UBXN4Q92575 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.58□□□□□ -1.84
UBXN4Q92575 RNU7-4P-201ENST00000516961 62 ntBASIC3.58□□□□□ -1.84
UBXN4Q92575 SNORA48.11-201ENST00000517015 89 ntBASIC3.58□□□□□ -1.84
UBXN4Q92575 RNU6-699P-201ENST00000517081 110 ntBASIC3.58□□□□□ -1.84
UBXN4Q92575 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.58□□□□□ -1.84
UBXN4Q92575 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.58□□□□□ -1.84
UBXN4Q92575 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.58□□□□□ -1.84
UBXN4Q92575 MIR1244-1-201ENST00000612829 85 ntBASIC3.58□□□□□ -1.84
UBXN4Q92575 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.58□□□□□ -1.84
UBXN4Q92575 MIR1244-3-201ENST00000635744 85 ntBASIC3.58□□□□□ -1.84
UBXN4Q92575 MIR1244-2-201ENST00000636449 85 ntBASIC3.58□□□□□ -1.84
UBXN4Q92575 MIR1244-4-202ENST00000636813 85 ntBASIC3.58□□□□□ -1.84
UBXN4Q92575 AC009093.8-201ENST00000641769 292 ntBASIC3.58□□□□□ -1.84
UBXN4Q92575 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.58□□□□□ -1.84
UBXN4Q92575 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
UBXN4Q92575 Y_RNA.314-201ENST00000365114 102 ntBASIC3.57□□□□□ -1.84
UBXN4Q92575 Y_RNA.445-201ENST00000384168 102 ntBASIC3.57□□□□□ -1.84
UBXN4Q92575 RNU6-17P-201ENST00000384245 107 ntBASIC3.57□□□□□ -1.84
UBXN4Q92575 RNU6-18P-201ENST00000384527 107 ntBASIC3.57□□□□□ -1.84
UBXN4Q92575 SNORA12-201ENST00000391162 147 ntBASIC3.57□□□□□ -1.84
UBXN4Q92575 MIR190B-201ENST00000401119 79 ntBASIC3.57□□□□□ -1.84
UBXN4Q92575 RNU6-1156P-201ENST00000410365 100 ntBASIC3.57□□□□□ -1.84
UBXN4Q92575 RN7SKP58-201ENST00000411010 305 ntBASIC3.57□□□□□ -1.84
UBXN4Q92575 CBX3P6-201ENST00000430257 527 ntBASIC3.57□□□□□ -1.84
UBXN4Q92575 AC106707.2-201ENST00000484182 374 ntBASIC3.57□□□□□ -1.84
UBXN4Q92575 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.57□□□□□ -1.84
UBXN4Q92575 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.57□□□□□ -1.84
UBXN4Q92575 RPPH1-2P-201ENST00000516688 293 ntBASIC3.57□□□□□ -1.84
UBXN4Q92575 RNA5SP54-201ENST00000516951 92 ntBASIC3.57□□□□□ -1.84
UBXN4Q92575 AC090517.1-201ENST00000569307 266 ntBASIC3.57□□□□□ -1.84
UBXN4Q92575 MIR4506-201ENST00000584693 77 ntBASIC3.57□□□□□ -1.84
UBXN4Q92575 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
UBXN4Q92575 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.57□□□□□ -1.84
UBXN4Q92575 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
UBXN4Q92575 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
UBXN4Q92575 RNU6-1115P-201ENST00000362490 106 ntBASIC3.56□□□□□ -1.84
UBXN4Q92575 RNU4-76P-201ENST00000364509 141 ntBASIC3.56□□□□□ -1.84
UBXN4Q92575 RNA5SP51-201ENST00000364750 119 ntBASIC3.56□□□□□ -1.84
UBXN4Q92575 Y_RNA.463-201ENST00000384271 102 ntBASIC3.56□□□□□ -1.84
UBXN4Q92575 MIR95-201ENST00000385072 81 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 182 ms