Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.26□□□□□ -2.21
SMARCD3Q6STE5 RNU1-17P-201ENST00000363022 152 ntBASIC1.26□□□□□ -2.21
SMARCD3Q6STE5 RNU4-13P-201ENST00000364019 141 ntBASIC1.26□□□□□ -2.21
SMARCD3Q6STE5 RNU4-75P-201ENST00000364621 146 ntBASIC1.26□□□□□ -2.21
SMARCD3Q6STE5 Y_RNA.409-201ENST00000383990 98 ntBASIC1.26□□□□□ -2.21
SMARCD3Q6STE5 SNORD116-20-201ENST00000384529 92 ntBASIC1.26□□□□□ -2.21
SMARCD3Q6STE5 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.26□□□□□ -2.21
SMARCD3Q6STE5 RNU6-482P-201ENST00000391068 107 ntBASIC1.26□□□□□ -2.21
SMARCD3Q6STE5 MIR1283-2-201ENST00000408621 87 ntBASIC1.26□□□□□ -2.21
SMARCD3Q6STE5 RNU6-387P-201ENST00000411331 105 ntBASIC1.26□□□□□ -2.21
SMARCD3Q6STE5 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.26□□□□□ -2.21
SMARCD3Q6STE5 AC016907.1-201ENST00000419483 435 ntBASIC1.26□□□□□ -2.21
SMARCD3Q6STE5 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.26□□□□□ -2.21
SMARCD3Q6STE5 MTCO2P19-201ENST00000427513 598 ntBASIC1.26□□□□□ -2.21
SMARCD3Q6STE5 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.26□□□□□ -2.21
SMARCD3Q6STE5 MTND1P18-201ENST00000448191 573 ntBASIC1.26□□□□□ -2.21
SMARCD3Q6STE5 AL137159.1-201ENST00000452808 512 ntBASIC1.26□□□□□ -2.21
SMARCD3Q6STE5 AP001025.1-201ENST00000486139 332 ntBASIC1.26□□□□□ -2.21
SMARCD3Q6STE5 RN7SKP298-201ENST00000515950 94 ntBASIC1.26□□□□□ -2.21
SMARCD3Q6STE5 RN7SKP219-201ENST00000516825 296 ntBASIC1.26□□□□□ -2.21
SMARCD3Q6STE5 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.26□□□□□ -2.21
SMARCD3Q6STE5 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.26□□□□□ -2.21
SMARCD3Q6STE5 MIR5692A1-201ENST00000580523 69 ntBASIC1.26□□□□□ -2.21
SMARCD3Q6STE5 BNIP3P30-201ENST00000601184 574 ntBASIC1.26□□□□□ -2.21
SMARCD3Q6STE5 ELOCP5-201ENST00000604924 333 ntBASIC1.26□□□□□ -2.21
SMARCD3Q6STE5 AC008945.2-201ENST00000606056 604 ntBASIC1.26□□□□□ -2.21
SMARCD3Q6STE5 AC103591.3-201ENST00000608684 209 ntBASIC1.26□□□□□ -2.21
SMARCD3Q6STE5 AC007684.1-201ENST00000609671 477 ntBASIC1.26□□□□□ -2.21
SMARCD3Q6STE5 AC109347.2-201ENST00000610220 349 ntBASIC1.26□□□□□ -2.21
SMARCD3Q6STE5 Z99129.1-201ENST00000612510 255 ntBASIC1.26□□□□□ -2.21
SMARCD3Q6STE5 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 MIR424-201ENST00000362227 98 ntBASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 RNU6-529P-201ENST00000363383 104 ntBASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 Y_RNA.296-201ENST00000364930 108 ntBASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 RNU6-338P-201ENST00000383888 105 ntBASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 RNU6-1127P-201ENST00000384580 107 ntBASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 SNORA16.2-201ENST00000390991 127 ntBASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 SNORD70.1-201ENST00000391007 85 ntBASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 RNU6-1158P-201ENST00000391167 107 ntBASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 RNU6-903P-201ENST00000391270 109 ntBASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 BTF3L4P2-201ENST00000392798 346 ntBASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 RNU2-66P-201ENST00000410650 161 ntBASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 RNU6-607P-201ENST00000411283 108 ntBASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 HMGB1P31-201ENST00000437242 427 ntBASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 MTND2P29-201ENST00000438595 412 ntBASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 MTATP6P26-201ENST00000445926 662 ntBASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 MTND1P29-201ENST00000448112 647 ntBASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 HSPE1P24-201ENST00000450782 238 ntBASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 RPS29P23-201ENST00000458635 123 ntBASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 SCARNA18-201ENST00000459004 134 ntBASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 RPS3AP17-201ENST00000472594 777 ntBASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 AC114801.2-201ENST00000503825 781 ntBASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 AC074344.1-201ENST00000512823 224 ntBASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 RNU5B-3P-201ENST00000516601 115 ntBASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 SNORA43.2-201ENST00000516652 128 ntBASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 CYCSP27-201ENST00000527643 293 ntBASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 PSMA3P-201ENST00000555485 635 ntBASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 AC068790.2-201ENST00000602601 557 ntBASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 AL645939.4-201ENST00000604495 135 ntBASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 AC021646.1-201ENST00000605469 484 ntBASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 AC123912.5-201ENST00000605470 343 ntBASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 AC093788.1-201ENST00000609356 927 ntBASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 AL353997.5-201ENST00000618886 171 ntBASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 RMST_7.1-201ENST00000621935 268 ntBASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
SMARCD3Q6STE5 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
SMARCD3Q6STE5 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
SMARCD3Q6STE5 RNU6-37P-201ENST00000362692 107 ntBASIC1.24□□□□□ -2.21
SMARCD3Q6STE5 SNORD56.1-201ENST00000362913 68 ntBASIC1.24□□□□□ -2.21
SMARCD3Q6STE5 RNU6-1120P-201ENST00000362988 108 ntBASIC1.24□□□□□ -2.21
SMARCD3Q6STE5 RNU6-11P-201ENST00000364234 107 ntBASIC1.24□□□□□ -2.21
SMARCD3Q6STE5 RNU6-25P-201ENST00000383873 107 ntBASIC1.24□□□□□ -2.21
SMARCD3Q6STE5 RNU6-1-201ENST00000383898 107 ntBASIC1.24□□□□□ -2.21
SMARCD3Q6STE5 RNU6-48P-201ENST00000384161 107 ntBASIC1.24□□□□□ -2.21
SMARCD3Q6STE5 RNU6-36P-201ENST00000384172 107 ntBASIC1.24□□□□□ -2.21
SMARCD3Q6STE5 RNU6-4P-201ENST00000384205 107 ntBASIC1.24□□□□□ -2.21
SMARCD3Q6STE5 RNU6-5P-201ENST00000384238 107 ntBASIC1.24□□□□□ -2.21
SMARCD3Q6STE5 RNU6-3P-201ENST00000384314 107 ntBASIC1.24□□□□□ -2.21
SMARCD3Q6STE5 RNU6-16P-201ENST00000384385 107 ntBASIC1.24□□□□□ -2.21
SMARCD3Q6STE5 RNU6-843P-201ENST00000384454 104 ntBASIC1.24□□□□□ -2.21
SMARCD3Q6STE5 RNU6-15P-201ENST00000384534 107 ntBASIC1.24□□□□□ -2.21
SMARCD3Q6STE5 RNU6-2-201ENST00000384627 107 ntBASIC1.24□□□□□ -2.21
SMARCD3Q6STE5 RNU6-29P-201ENST00000384637 107 ntBASIC1.24□□□□□ -2.21
SMARCD3Q6STE5 RNU6-9-201ENST00000384776 107 ntBASIC1.24□□□□□ -2.21
SMARCD3Q6STE5 RNU6-33P-201ENST00000384793 107 ntBASIC1.24□□□□□ -2.21
SMARCD3Q6STE5 MIR758-201ENST00000390227 88 ntBASIC1.24□□□□□ -2.21
SMARCD3Q6STE5 Y_RNA.582-201ENST00000391023 95 ntBASIC1.24□□□□□ -2.21
SMARCD3Q6STE5 RNU6-174P-201ENST00000410406 106 ntBASIC1.24□□□□□ -2.21
SMARCD3Q6STE5 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.24□□□□□ -2.21
SMARCD3Q6STE5 UBE2V1P10-201ENST00000414685 269 ntBASIC1.24□□□□□ -2.21
SMARCD3Q6STE5 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.24□□□□□ -2.21
SMARCD3Q6STE5 AC008267.5-201ENST00000424928 265 ntBASIC1.24□□□□□ -2.21
SMARCD3Q6STE5 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.24□□□□□ -2.21
SMARCD3Q6STE5 AC073464.1-201ENST00000429823 534 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms