Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CDPF1Q6NVV7 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CDPF1Q6NVV7 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDPF1Q6NVV7 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDPF1Q6NVV7 MIR133B-201ENST00000362210 119 ntBASIC3.56□□□□□ -1.84
CDPF1Q6NVV7 RNU6-1255P-201ENST00000363434 112 ntBASIC3.56□□□□□ -1.84
CDPF1Q6NVV7 RNU6-1210P-201ENST00000363775 107 ntBASIC3.56□□□□□ -1.84
CDPF1Q6NVV7 SNORA25.7-201ENST00000364375 127 ntBASIC3.56□□□□□ -1.84
CDPF1Q6NVV7 AC068538.1-201ENST00000376856 336 ntBASIC3.56□□□□□ -1.84
CDPF1Q6NVV7 SNORA36B-201ENST00000410438 131 ntBASIC3.56□□□□□ -1.84
CDPF1Q6NVV7 AC117454.1-201ENST00000491120 168 ntBASIC3.56□□□□□ -1.84
CDPF1Q6NVV7 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.56□□□□□ -1.84
CDPF1Q6NVV7 AC092490.3-201ENST00000545370 572 ntBASIC3.56□□□□□ -1.84
CDPF1Q6NVV7 AL110118.1-201ENST00000553543 400 ntBASIC3.56□□□□□ -1.84
CDPF1Q6NVV7 Y_RNA.757-201ENST00000578934 114 ntBASIC3.56□□□□□ -1.84
CDPF1Q6NVV7 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC3.56□□□□□ -1.84
CDPF1Q6NVV7 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC3.56□□□□□ -1.84
CDPF1Q6NVV7 HSPE1P7-201ENST00000604681 321 ntBASIC3.56□□□□□ -1.84
CDPF1Q6NVV7 RPL17P51-201ENST00000605218 238 ntBASIC3.56□□□□□ -1.84
CDPF1Q6NVV7 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.56□□□□□ -1.84
CDPF1Q6NVV7 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC3.56□□□□□ -1.84
CDPF1Q6NVV7 MIR3914-2-201ENST00000637339 95 ntBASIC3.56□□□□□ -1.84
CDPF1Q6NVV7 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.56□□□□□ -1.84
CDPF1Q6NVV7 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CDPF1Q6NVV7 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.56□□□□□ -1.84
CDPF1Q6NVV7 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDPF1Q6NVV7 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC3.56□□□□□ -1.84
CDPF1Q6NVV7 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDPF1Q6NVV7 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.55□□□□□ -1.84
CDPF1Q6NVV7 AC026241.1-201ENST00000517873 2142 ntBASIC3.55□□□□□ -1.84
CDPF1Q6NVV7 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDPF1Q6NVV7 AC069528.2-201ENST00000624849 1991 ntBASIC3.55□□□□□ -1.84
CDPF1Q6NVV7 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.55□□□□□ -1.84
CDPF1Q6NVV7 RNU6-1082P-201ENST00000364574 107 ntBASIC3.55□□□□□ -1.84
CDPF1Q6NVV7 Y_RNA.584-201ENST00000391090 114 ntBASIC3.55□□□□□ -1.84
CDPF1Q6NVV7 U3.36-201ENST00000408418 213 ntBASIC3.55□□□□□ -1.84
CDPF1Q6NVV7 MIR1278-201ENST00000408753 81 ntBASIC3.55□□□□□ -1.84
CDPF1Q6NVV7 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.55□□□□□ -1.84
CDPF1Q6NVV7 AC006466.1-201ENST00000438721 289 ntBASIC3.55□□□□□ -1.84
CDPF1Q6NVV7 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.55□□□□□ -1.84
CDPF1Q6NVV7 AC090142.3-201ENST00000519012 385 ntBASIC3.55□□□□□ -1.84
CDPF1Q6NVV7 MIR378D2-201ENST00000580636 98 ntBASIC3.55□□□□□ -1.84
CDPF1Q6NVV7 AC011447.4-201ENST00000587562 111 ntBASIC3.55□□□□□ -1.84
CDPF1Q6NVV7 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.55□□□□□ -1.84
CDPF1Q6NVV7 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC3.55□□□□□ -1.84
CDPF1Q6NVV7 AL591926.8-201ENST00000616876 211 ntBASIC3.55□□□□□ -1.84
CDPF1Q6NVV7 AC068647.2-201ENST00000637380 353 ntBASIC3.55□□□□□ -1.84
CDPF1Q6NVV7 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CDPF1Q6NVV7 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDPF1Q6NVV7 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDPF1Q6NVV7 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.55□□□□□ -1.84
CDPF1Q6NVV7 AL159152.1-201ENST00000635019 2587 ntBASIC3.55□□□□□ -1.84
CDPF1Q6NVV7 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CDPF1Q6NVV7 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDPF1Q6NVV7 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CDPF1Q6NVV7 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.54□□□□□ -1.84
CDPF1Q6NVV7 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CDPF1Q6NVV7 RPL23P2-201ENST00000320371 421 ntBASIC3.54□□□□□ -1.84
CDPF1Q6NVV7 SNORD45.3-201ENST00000363836 72 ntBASIC3.54□□□□□ -1.84
CDPF1Q6NVV7 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CDPF1Q6NVV7 RNU1-89P-201ENST00000384592 164 ntBASIC3.54□□□□□ -1.84
CDPF1Q6NVV7 MIR586-201ENST00000385035 97 ntBASIC3.54□□□□□ -1.84
CDPF1Q6NVV7 SNORA79-201ENST00000408376 140 ntBASIC3.54□□□□□ -1.84
CDPF1Q6NVV7 AC245047.4-201ENST00000433189 144 ntBASIC3.54□□□□□ -1.84
CDPF1Q6NVV7 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC3.54□□□□□ -1.84
CDPF1Q6NVV7 RPL23AP62-201ENST00000463396 453 ntBASIC3.54□□□□□ -1.84
CDPF1Q6NVV7 AC015795.1-201ENST00000513669 327 ntBASIC3.54□□□□□ -1.84
CDPF1Q6NVV7 RNU5E-3P-201ENST00000515913 68 ntBASIC3.54□□□□□ -1.84
CDPF1Q6NVV7 RNA5SP446-201ENST00000515955 82 ntBASIC3.54□□□□□ -1.84
CDPF1Q6NVV7 RNU1-61P-201ENST00000516107 151 ntBASIC3.54□□□□□ -1.84
CDPF1Q6NVV7 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.54□□□□□ -1.84
CDPF1Q6NVV7 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.54□□□□□ -1.84
CDPF1Q6NVV7 MTND5P34-201ENST00000568888 325 ntBASIC3.54□□□□□ -1.84
CDPF1Q6NVV7 AC006116.3-201ENST00000592968 361 ntBASIC3.54□□□□□ -1.84
CDPF1Q6NVV7 AC120024.3-201ENST00000603167 156 ntBASIC3.54□□□□□ -1.84
CDPF1Q6NVV7 AP003357.1-201ENST00000604497 148 ntBASIC3.54□□□□□ -1.84
CDPF1Q6NVV7 U6.95-201ENST00000636931 70 ntBASIC3.54□□□□□ -1.84
CDPF1Q6NVV7 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CDPF1Q6NVV7 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDPF1Q6NVV7 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC3.54□□□□□ -1.84
CDPF1Q6NVV7 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC3.54□□□□□ -1.84
CDPF1Q6NVV7 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDPF1Q6NVV7 AC000403.1-201ENST00000613696 3585 ntBASIC3.54□□□□□ -1.84
CDPF1Q6NVV7 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDPF1Q6NVV7 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
CDPF1Q6NVV7 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CDPF1Q6NVV7 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDPF1Q6NVV7 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDPF1Q6NVV7 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDPF1Q6NVV7 RNU6-655P-201ENST00000362858 107 ntBASIC3.53□□□□□ -1.84
CDPF1Q6NVV7 RNA5SP151-201ENST00000365632 117 ntBASIC3.53□□□□□ -1.84
CDPF1Q6NVV7 SNORA22-201ENST00000383907 134 ntBASIC3.53□□□□□ -1.84
CDPF1Q6NVV7 MIR518C-201ENST00000384822 101 ntBASIC3.53□□□□□ -1.84
CDPF1Q6NVV7 AL138878.1-201ENST00000405131 347 ntBASIC3.53□□□□□ -1.84
CDPF1Q6NVV7 MIR1185-2-201ENST00000408687 86 ntBASIC3.53□□□□□ -1.84
CDPF1Q6NVV7 RPL23AP1-201ENST00000428990 471 ntBASIC3.53□□□□□ -1.84
CDPF1Q6NVV7 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.53□□□□□ -1.84
CDPF1Q6NVV7 AL445584.1-201ENST00000431451 330 ntBASIC3.53□□□□□ -1.84
CDPF1Q6NVV7 AL450023.3-201ENST00000440592 271 ntBASIC3.53□□□□□ -1.84
CDPF1Q6NVV7 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms