Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
PPP4R4Q6NUP7 Y_RNA.48-201ENST00000362710 103 ntBASIC3.05□□□□□ -1.92
PPP4R4Q6NUP7 SNORA38-201ENST00000363946 132 ntBASIC3.05□□□□□ -1.92
PPP4R4Q6NUP7 RNU6-331P-201ENST00000384724 107 ntBASIC3.05□□□□□ -1.92
PPP4R4Q6NUP7 MIR29B2-201ENST00000385055 81 ntBASIC3.05□□□□□ -1.92
PPP4R4Q6NUP7 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.05□□□□□ -1.92
PPP4R4Q6NUP7 EIF1AXP1-201ENST00000419267 435 ntBASIC3.05□□□□□ -1.92
PPP4R4Q6NUP7 AL358453.1-201ENST00000422522 250 ntBASIC3.05□□□□□ -1.92
PPP4R4Q6NUP7 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.05□□□□□ -1.92
PPP4R4Q6NUP7 GPM6BP3-201ENST00000442797 145 ntBASIC3.05□□□□□ -1.92
PPP4R4Q6NUP7 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PPP4R4Q6NUP7 RNU7-152P-201ENST00000458982 64 ntBASIC3.05□□□□□ -1.92
PPP4R4Q6NUP7 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.05□□□□□ -1.92
PPP4R4Q6NUP7 RPS29P2-201ENST00000479278 136 ntBASIC3.05□□□□□ -1.92
PPP4R4Q6NUP7 RN7SL499P-201ENST00000481141 276 ntBASIC3.05□□□□□ -1.92
PPP4R4Q6NUP7 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
PPP4R4Q6NUP7 RN7SKP43-201ENST00000516173 320 ntBASIC3.05□□□□□ -1.92
PPP4R4Q6NUP7 Y_RNA.675-201ENST00000516389 149 ntBASIC3.05□□□□□ -1.92
PPP4R4Q6NUP7 IGKV2-26-201ENST00000518305 343 ntBASIC3.05□□□□□ -1.92
PPP4R4Q6NUP7 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.05□□□□□ -1.92
PPP4R4Q6NUP7 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.05□□□□□ -1.92
PPP4R4Q6NUP7 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.05□□□□□ -1.92
PPP4R4Q6NUP7 AC016256.1-201ENST00000547971 354 ntBASIC3.05□□□□□ -1.92
PPP4R4Q6NUP7 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.05□□□□□ -1.92
PPP4R4Q6NUP7 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.05□□□□□ -1.92
PPP4R4Q6NUP7 Z98751.3-201ENST00000604447 521 ntBASIC3.05□□□□□ -1.92
PPP4R4Q6NUP7 AC007179.3-201ENST00000604976 235 ntBASIC3.05□□□□□ -1.92
PPP4R4Q6NUP7 AL670379.2-201ENST00000604983 252 ntBASIC3.05□□□□□ -1.92
PPP4R4Q6NUP7 AC135507.2-201ENST00000612443 309 ntBASIC3.05□□□□□ -1.92
PPP4R4Q6NUP7 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
PPP4R4Q6NUP7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PPP4R4Q6NUP7 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PPP4R4Q6NUP7 RNU1-70P-201ENST00000362618 164 ntBASIC3.04□□□□□ -1.92
PPP4R4Q6NUP7 RNU6-525P-201ENST00000363685 104 ntBASIC3.04□□□□□ -1.92
PPP4R4Q6NUP7 Y_RNA.384-201ENST00000383909 102 ntBASIC3.04□□□□□ -1.92
PPP4R4Q6NUP7 RNU6-142P-201ENST00000384019 107 ntBASIC3.04□□□□□ -1.92
PPP4R4Q6NUP7 RNU6-968P-201ENST00000384076 107 ntBASIC3.04□□□□□ -1.92
PPP4R4Q6NUP7 RNU6-1274P-201ENST00000384557 107 ntBASIC3.04□□□□□ -1.92
PPP4R4Q6NUP7 RNA5SP229-201ENST00000410809 99 ntBASIC3.04□□□□□ -1.92
PPP4R4Q6NUP7 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.04□□□□□ -1.92
PPP4R4Q6NUP7 USMG5P1-201ENST00000425964 177 ntBASIC3.04□□□□□ -1.92
PPP4R4Q6NUP7 RPS3AP12-201ENST00000443616 753 ntBASIC3.04□□□□□ -1.92
PPP4R4Q6NUP7 AC021146.2-201ENST00000504736 556 ntBASIC3.04□□□□□ -1.92
PPP4R4Q6NUP7 SCARNA16.2-201ENST00000516520 172 ntBASIC3.04□□□□□ -1.92
PPP4R4Q6NUP7 RN7SKP272-201ENST00000516988 232 ntBASIC3.04□□□□□ -1.92
PPP4R4Q6NUP7 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.04□□□□□ -1.92
PPP4R4Q6NUP7 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.04□□□□□ -1.92
PPP4R4Q6NUP7 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.04□□□□□ -1.92
PPP4R4Q6NUP7 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.04□□□□□ -1.92
PPP4R4Q6NUP7 AC010928.2-201ENST00000588017 287 ntBASIC3.04□□□□□ -1.92
PPP4R4Q6NUP7 AC023043.3-201ENST00000593113 385 ntBASIC3.04□□□□□ -1.92
PPP4R4Q6NUP7 MIR7975-201ENST00000619350 68 ntBASIC3.04□□□□□ -1.92
PPP4R4Q6NUP7 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.04□□□□□ -1.92
PPP4R4Q6NUP7 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.04□□□□□ -1.92
PPP4R4Q6NUP7 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.03□□□□□ -1.92
PPP4R4Q6NUP7 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.03□□□□□ -1.92
PPP4R4Q6NUP7 AL161431.1-201ENST00000618966 4205 ntBASIC3.03□□□□□ -1.92
PPP4R4Q6NUP7 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PPP4R4Q6NUP7 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.03□□□□□ -1.92
PPP4R4Q6NUP7 snoU2_19.1-201ENST00000362361 80 ntBASIC3.03□□□□□ -1.92
PPP4R4Q6NUP7 VTRNA1-1-201ENST00000363120 99 ntBASIC3.03□□□□□ -1.92
PPP4R4Q6NUP7 Y_RNA.259-201ENST00000364619 101 ntBASIC3.03□□□□□ -1.92
PPP4R4Q6NUP7 UBA52P6-201ENST00000399822 382 ntBASIC3.03□□□□□ -1.92
PPP4R4Q6NUP7 MTCYBP4-201ENST00000401524 249 ntBASIC3.03□□□□□ -1.92
PPP4R4Q6NUP7 RNA5SP201-201ENST00000410316 124 ntBASIC3.03□□□□□ -1.92
PPP4R4Q6NUP7 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.03□□□□□ -1.92
PPP4R4Q6NUP7 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.03□□□□□ -1.92
PPP4R4Q6NUP7 MTND3P23-201ENST00000431980 347 ntBASIC3.03□□□□□ -1.92
PPP4R4Q6NUP7 Z82188.1-201ENST00000436709 154 ntBASIC3.03□□□□□ -1.92
PPP4R4Q6NUP7 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.03□□□□□ -1.92
PPP4R4Q6NUP7 AL513124.1-201ENST00000450410 614 ntBASIC3.03□□□□□ -1.92
PPP4R4Q6NUP7 RPL23AP75-201ENST00000491601 451 ntBASIC3.03□□□□□ -1.92
PPP4R4Q6NUP7 AC097473.1-201ENST00000508142 408 ntBASIC3.03□□□□□ -1.92
PPP4R4Q6NUP7 RNU6-120P-201ENST00000516077 103 ntBASIC3.03□□□□□ -1.92
PPP4R4Q6NUP7 AC007375.1-201ENST00000554513 578 ntBASIC3.03□□□□□ -1.92
PPP4R4Q6NUP7 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.03□□□□□ -1.92
PPP4R4Q6NUP7 AC096577.2-201ENST00000611455 153 ntBASIC3.03□□□□□ -1.92
PPP4R4Q6NUP7 AC084781.2-201ENST00000615568 161 ntBASIC3.03□□□□□ -1.92
PPP4R4Q6NUP7 AC090517.3-201ENST00000625170 141 ntBASIC3.03□□□□□ -1.92
PPP4R4Q6NUP7 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.03□□□□□ -1.92
PPP4R4Q6NUP7 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
PPP4R4Q6NUP7 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PPP4R4Q6NUP7 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
PPP4R4Q6NUP7 AL355596.1-201ENST00000565399 3996 ntBASIC3.02□□□□□ -1.93
PPP4R4Q6NUP7 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PPP4R4Q6NUP7 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PPP4R4Q6NUP7 Y_RNA.2-201ENST00000362330 96 ntBASIC3.02□□□□□ -1.93
PPP4R4Q6NUP7 Y_RNA.535-201ENST00000384612 99 ntBASIC3.02□□□□□ -1.93
PPP4R4Q6NUP7 MIR483-201ENST00000385070 76 ntBASIC3.02□□□□□ -1.93
PPP4R4Q6NUP7 MIR561-201ENST00000385216 97 ntBASIC3.02□□□□□ -1.93
PPP4R4Q6NUP7 U3.19-201ENST00000390893 196 ntBASIC3.02□□□□□ -1.93
PPP4R4Q6NUP7 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.02□□□□□ -1.93
PPP4R4Q6NUP7 AC112220.1-201ENST00000434628 355 ntBASIC3.02□□□□□ -1.93
PPP4R4Q6NUP7 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.02□□□□□ -1.93
PPP4R4Q6NUP7 ELOCP24-201ENST00000456370 334 ntBASIC3.02□□□□□ -1.93
PPP4R4Q6NUP7 snoU13.6-201ENST00000458785 104 ntBASIC3.02□□□□□ -1.93
PPP4R4Q6NUP7 AC018630.3-201ENST00000542637 96 ntBASIC3.02□□□□□ -1.93
PPP4R4Q6NUP7 AC021231.3-201ENST00000558497 370 ntBASIC3.02□□□□□ -1.93
PPP4R4Q6NUP7 AL050343.2-201ENST00000607338 280 ntBASIC3.02□□□□□ -1.93
PPP4R4Q6NUP7 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 223.1 ms