Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 FTH1P25-201ENST00000447665 469 ntBASIC2.26□□□□□ -2.05
SNAI3Q3KNW1 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SNAI3Q3KNW1 AC013470.1-201ENST00000453438 462 ntBASIC2.26□□□□□ -2.05
SNAI3Q3KNW1 PCMTD1P1-201ENST00000455560 355 ntBASIC2.26□□□□□ -2.05
SNAI3Q3KNW1 RPL7P42-201ENST00000481005 679 ntBASIC2.26□□□□□ -2.05
SNAI3Q3KNW1 AC023141.11-201ENST00000508864 202 ntBASIC2.26□□□□□ -2.05
SNAI3Q3KNW1 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.26□□□□□ -2.05
SNAI3Q3KNW1 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.26□□□□□ -2.05
SNAI3Q3KNW1 RNU6-581P-201ENST00000516214 105 ntBASIC2.26□□□□□ -2.05
SNAI3Q3KNW1 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.26□□□□□ -2.05
SNAI3Q3KNW1 Y_RNA.711-201ENST00000516993 102 ntBASIC2.26□□□□□ -2.05
SNAI3Q3KNW1 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.26□□□□□ -2.05
SNAI3Q3KNW1 TRAV32-201ENST00000553993 340 ntBASIC2.26□□□□□ -2.05
SNAI3Q3KNW1 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.26□□□□□ -2.05
SNAI3Q3KNW1 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.26□□□□□ -2.05
SNAI3Q3KNW1 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.26□□□□□ -2.05
SNAI3Q3KNW1 AL356575.1-201ENST00000603008 283 ntBASIC2.26□□□□□ -2.05
SNAI3Q3KNW1 AL033523.1-201ENST00000605153 153 ntBASIC2.26□□□□□ -2.05
SNAI3Q3KNW1 AL121917.1-203ENST00000605534 577 ntBASIC2.26□□□□□ -2.05
SNAI3Q3KNW1 AC133104.2-201ENST00000615272 193 ntBASIC2.26□□□□□ -2.05
SNAI3Q3KNW1 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.26□□□□□ -2.05
SNAI3Q3KNW1 uc_338.22-201ENST00000622722 187 ntBASIC2.26□□□□□ -2.05
SNAI3Q3KNW1 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SNAI3Q3KNW1 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
SNAI3Q3KNW1 AC010329.5-201ENST00000623497 2174 ntBASIC2.26□□□□□ -2.05
SNAI3Q3KNW1 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 Y_RNA.162-201ENST00000363683 102 ntBASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 RNU6-1059P-201ENST00000363752 98 ntBASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 RNU6-596P-201ENST00000365395 98 ntBASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 RNU6-1040P-201ENST00000383974 107 ntBASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 Y_RNA.445-201ENST00000384168 102 ntBASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 RNU6-842P-201ENST00000384269 107 ntBASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 RNU6-692P-201ENST00000384496 107 ntBASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 MIR518D-201ENST00000385014 87 ntBASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 RNU6-220P-201ENST00000390919 107 ntBASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 SNORA75.6-201ENST00000391318 127 ntBASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 AC096664.2-201ENST00000411843 406 ntBASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 AL137792.2-201ENST00000443484 235 ntBASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 snoU109.2-201ENST00000459316 135 ntBASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 RNU6-1037P-201ENST00000459571 107 ntBASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 AL163540.1-201ENST00000485382 386 ntBASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 PTP4A1P4-201ENST00000512479 322 ntBASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 SNORD19.2-201ENST00000516978 73 ntBASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 SNRPGP18-201ENST00000553000 214 ntBASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 LINC00933-203ENST00000559812 219 ntBASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 AC023824.2-201ENST00000566185 400 ntBASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 MIR4782-201ENST00000577987 79 ntBASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 MIR5194-201ENST00000582634 120 ntBASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 AC008121.1-201ENST00000603244 268 ntBASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 AC091152.3-201ENST00000604227 325 ntBASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 PART1_1.1-201ENST00000611761 217 ntBASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 HMGB1P24-202ENST00000615653 685 ntBASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 AC006386.2-201ENST00000624491 75 ntBASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 AC012005.1-201ENST00000624575 75 ntBASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.25□□□□□ -2.05
SNAI3Q3KNW1 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 Y_RNA.5-201ENST00000362334 102 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 Y_RNA.31-201ENST00000362574 102 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 RNU6-859P-201ENST00000362728 107 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 Y_RNA.112-201ENST00000363250 102 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 Y_RNA.202-201ENST00000364083 110 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 SNORA25.6-201ENST00000364121 118 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 Y_RNA.216-201ENST00000364205 93 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 RNU1-100P-201ENST00000365255 165 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 RNU6-827P-201ENST00000365553 106 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 RNU6-890P-201ENST00000384121 107 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 RNU6-72P-201ENST00000384285 79 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 RNU6-19P-201ENST00000384718 107 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 MIR147B-201ENST00000390185 80 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 RNU2-52P-201ENST00000410680 190 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 RNU6-325P-201ENST00000411132 105 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 COTL1P1-201ENST00000422309 375 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 PMCHL1-202ENST00000423102 261 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 TOMM20P4-201ENST00000427861 435 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 Z98742.2-201ENST00000431564 187 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 AL133396.1-201ENST00000432048 687 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 RPL23AP83-201ENST00000434984 473 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 AL031274.1-201ENST00000450334 232 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 SNORD109B-201ENST00000458961 67 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 SNORD109A-201ENST00000459128 67 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 SRIP1-201ENST00000489235 288 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 AC018437.1-201ENST00000492214 406 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 AC097462.2-201ENST00000504623 481 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 Y_RNA.687-201ENST00000516558 91 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 RNA5SP384-201ENST00000516615 116 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 AC109479.2-201ENST00000517842 174 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms