Protein–RNA interactions for Protein: Q16610

ECM1, Extracellular matrix protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1Q16610 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
ECM1Q16610 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
ECM1Q16610 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.25□□□□□ -1.73
ECM1Q16610 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ECM1Q16610 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ECM1Q16610 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ECM1Q16610 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.24□□□□□ -1.73
ECM1Q16610 AC099654.7-201ENST00000635788 2127 ntBASIC4.24□□□□□ -1.73
ECM1Q16610 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ECM1Q16610 ZNF204P-201ENST00000416749 2397 ntBASIC4.24□□□□□ -1.73
ECM1Q16610 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ECM1Q16610 LINC02471-203ENST00000641941 4752 ntBASIC4.24□□□□□ -1.73
ECM1Q16610 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ECM1Q16610 Y_RNA.44-201ENST00000362676 108 ntBASIC4.24□□□□□ -1.73
ECM1Q16610 RNU6-873P-201ENST00000363833 107 ntBASIC4.24□□□□□ -1.73
ECM1Q16610 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ECM1Q16610 RNU6-20P-201ENST00000384106 107 ntBASIC4.24□□□□□ -1.73
ECM1Q16610 RNU6-793P-201ENST00000384233 104 ntBASIC4.24□□□□□ -1.73
ECM1Q16610 Y_RNA.498-201ENST00000384460 102 ntBASIC4.24□□□□□ -1.73
ECM1Q16610 AL035461.1-201ENST00000421490 332 ntBASIC4.24□□□□□ -1.73
ECM1Q16610 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.24□□□□□ -1.73
ECM1Q16610 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.24□□□□□ -1.73
ECM1Q16610 AC244505.7-201ENST00000599675 272 ntBASIC4.24□□□□□ -1.73
ECM1Q16610 AL137849.1-201ENST00000604767 169 ntBASIC4.24□□□□□ -1.73
ECM1Q16610 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC4.24□□□□□ -1.73
ECM1Q16610 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
ECM1Q16610 RNU1-62P-201ENST00000362599 164 ntBASIC4.23□□□□□ -1.73
ECM1Q16610 Y_RNA.43-201ENST00000362670 111 ntBASIC4.23□□□□□ -1.73
ECM1Q16610 SNORA46.1-201ENST00000391069 153 ntBASIC4.23□□□□□ -1.73
ECM1Q16610 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
ECM1Q16610 RNU2-49P-201ENST00000410666 184 ntBASIC4.23□□□□□ -1.73
ECM1Q16610 HMGN2P20-201ENST00000437531 273 ntBASIC4.23□□□□□ -1.73
ECM1Q16610 AC010095.1-201ENST00000443543 144 ntBASIC4.23□□□□□ -1.73
ECM1Q16610 UQCRBP2-201ENST00000447827 297 ntBASIC4.23□□□□□ -1.73
ECM1Q16610 AL500522.2-201ENST00000448562 343 ntBASIC4.23□□□□□ -1.73
ECM1Q16610 HSPE1P25-201ENST00000455484 251 ntBASIC4.23□□□□□ -1.73
ECM1Q16610 HMGN2P7-201ENST00000456186 273 ntBASIC4.23□□□□□ -1.73
ECM1Q16610 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.23□□□□□ -1.73
ECM1Q16610 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.23□□□□□ -1.73
ECM1Q16610 CYCSP30-201ENST00000546447 172 ntBASIC4.23□□□□□ -1.73
ECM1Q16610 AC233702.2-202ENST00000562547 291 ntBASIC4.23□□□□□ -1.73
ECM1Q16610 MIR4423-201ENST00000580922 80 ntBASIC4.23□□□□□ -1.73
ECM1Q16610 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ECM1Q16610 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
ECM1Q16610 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ECM1Q16610 MTND5P35-201ENST00000557537 1720 ntBASIC4.23□□□□□ -1.73
ECM1Q16610 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.23□□□□□ -1.73
ECM1Q16610 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.22□□□□□ -1.73
ECM1Q16610 SNORA18.3-201ENST00000384122 132 ntBASIC4.22□□□□□ -1.73
ECM1Q16610 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
ECM1Q16610 RNU6-1077P-201ENST00000410506 102 ntBASIC4.22□□□□□ -1.73
ECM1Q16610 AC017079.2-201ENST00000416102 485 ntBASIC4.22□□□□□ -1.73
ECM1Q16610 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.22□□□□□ -1.73
ECM1Q16610 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.22□□□□□ -1.73
ECM1Q16610 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.22□□□□□ -1.73
ECM1Q16610 snoU13.14-201ENST00000459372 104 ntBASIC4.22□□□□□ -1.73
ECM1Q16610 SNRPGP3-201ENST00000469405 227 ntBASIC4.22□□□□□ -1.73
ECM1Q16610 RNU5F-2P-201ENST00000516066 82 ntBASIC4.22□□□□□ -1.73
ECM1Q16610 AL391813.1-201ENST00000603098 260 ntBASIC4.22□□□□□ -1.73
ECM1Q16610 AL078605.1-201ENST00000603529 500 ntBASIC4.22□□□□□ -1.73
ECM1Q16610 AL034555.1-201ENST00000604816 211 ntBASIC4.22□□□□□ -1.73
ECM1Q16610 BRDTP1-201ENST00000605735 677 ntBASIC4.22□□□□□ -1.73
ECM1Q16610 AC108706.1-201ENST00000611053 297 ntBASIC4.22□□□□□ -1.73
ECM1Q16610 AC104465.1-201ENST00000611365 139 ntBASIC4.22□□□□□ -1.73
ECM1Q16610 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.22□□□□□ -1.73
ECM1Q16610 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ECM1Q16610 MFSD8-236ENST00000641509 4050 ntBASIC4.21□□□□□ -1.73
ECM1Q16610 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.73
ECM1Q16610 AC087190.4-201ENST00000574616 8334 ntBASIC4.21□□□□□ -1.73
ECM1Q16610 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
ECM1Q16610 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
ECM1Q16610 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ECM1Q16610 AL355596.1-201ENST00000565399 3996 ntBASIC4.21□□□□□ -1.74
ECM1Q16610 RNU6-1020P-201ENST00000363684 107 ntBASIC4.21□□□□□ -1.74
ECM1Q16610 RNU6-1175P-201ENST00000365200 107 ntBASIC4.21□□□□□ -1.74
ECM1Q16610 RNU6-417P-201ENST00000384712 107 ntBASIC4.21□□□□□ -1.74
ECM1Q16610 MIR134-201ENST00000385258 73 ntBASIC4.21□□□□□ -1.74
ECM1Q16610 RNA5SP354-201ENST00000391247 136 ntBASIC4.21□□□□□ -1.74
ECM1Q16610 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.21□□□□□ -1.74
ECM1Q16610 RN7SKP156-201ENST00000410308 342 ntBASIC4.21□□□□□ -1.74
ECM1Q16610 AL445584.1-201ENST00000431451 330 ntBASIC4.21□□□□□ -1.74
ECM1Q16610 POLR2KP2-201ENST00000438155 177 ntBASIC4.21□□□□□ -1.74
ECM1Q16610 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC4.21□□□□□ -1.74
ECM1Q16610 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.21□□□□□ -1.74
ECM1Q16610 SNORA31.16-201ENST00000516773 139 ntBASIC4.21□□□□□ -1.74
ECM1Q16610 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.21□□□□□ -1.74
ECM1Q16610 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ECM1Q16610 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ECM1Q16610 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.21□□□□□ -1.74
ECM1Q16610 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
ECM1Q16610 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ECM1Q16610 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
ECM1Q16610 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ECM1Q16610 AC007256.1-201ENST00000392253 2765 ntBASIC4.2□□□□□ -1.74
ECM1Q16610 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.2□□□□□ -1.74
ECM1Q16610 AL109809.4-201ENST00000603520 2185 ntBASIC4.2□□□□□ -1.74
ECM1Q16610 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ECM1Q16610 RNA5SP205-201ENST00000364653 136 ntBASIC4.2□□□□□ -1.74
ECM1Q16610 Y_RNA.570-201ENST00000384750 101 ntBASIC4.2□□□□□ -1.74
ECM1Q16610 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms