Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RAB28P5-201ENST00000427490 651 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 MTCYBP32-201ENST00000427945 1084 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 SNRPEP9-201ENST00000436794 238 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 MTND2P4-201ENST00000445034 1004 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC-0.05□□□□□ -2.42
HSPG2P98160 AC097473.1-201ENST00000508142 408 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 ARL2BPP5-201ENST00000523141 481 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC-0.05□□□□□ -2.42
HSPG2P98160 AC079598.5-201ENST00000547460 117 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 AC022523.2-201ENST00000561045 150 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC-0.05□□□□□ -2.42
HSPG2P98160 AL590229.1-201ENST00000603497 542 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 AC007363.1-201ENST00000604736 620 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 AC130324.3-201ENST00000614165 542 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 MIR548AZ-201ENST00000616567 95 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 AL163051.2-201ENST00000618976 735 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 AC100810.6-201ENST00000638068 285 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 CASC19-280ENST00000642102 1351 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 RNA5SP259-201ENST00000365541 109 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 MTCYBP15-201ENST00000433123 1127 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 BRK1P2-201ENST00000442875 223 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC-0.05□□□□□ -2.42
HSPG2P98160 FCF1P6-201ENST00000456841 595 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 HMGB1P29-201ENST00000505659 499 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC-0.05□□□□□ -2.42
HSPG2P98160 SNORA31.2-201ENST00000516019 134 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC-0.05□□□□□ -2.42
HSPG2P98160 AP003066.2-201ENST00000529375 555 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 AL355297.3-201ENST00000604082 446 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 AL365434.2-201ENST00000607979 234 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 7SK.10-201ENST00000621414 298 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 AC080188.3-201ENST00000624842 748 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 AC010615.1-201ENST00000594254 1764 ntBASIC-0.05□□□□□ -2.42
HSPG2P98160 RNU4-48P-201ENST00000365559 182 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
HSPG2P98160 SNORA36.2-201ENST00000384004 127 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 RNU6-167P-201ENST00000384292 106 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 USP9YP22-201ENST00000438971 294 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 NDUFA5P7-201ENST00000452914 242 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 BTF3P15-201ENST00000455606 336 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 RNA5SP269-201ENST00000459032 137 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 RNU6-333P-201ENST00000459117 107 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC-0.06□□□□□ -2.42
HSPG2P98160 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.06□□□□□ -2.42
HSPG2P98160 RNU6-165P-201ENST00000517170 99 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 SUMO2P16-201ENST00000519475 264 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC-0.06□□□□□ -2.42
HSPG2P98160 LARP7P1-201ENST00000605576 316 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC-0.06□□□□□ -2.42
HSPG2P98160 uc_338.34-201ENST00000617467 174 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 AC119674.1-220ENST00000641502 1048 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 AC092268.1-201ENST00000342691 405 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC-0.06□□□□□ -2.42
HSPG2P98160 RNU6-23P-201ENST00000363283 107 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 RNU6-529P-201ENST00000363383 104 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 RNA5SP275-201ENST00000363936 118 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 RNU6-1019P-201ENST00000364424 107 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 SNORA72.2-201ENST00000365028 127 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 RNU6-1274P-201ENST00000384557 107 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 MIR520A-201ENST00000384862 85 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 ELOCP9-201ENST00000418624 239 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC-0.06□□□□□ -2.42
HSPG2P98160 AL929288.2-201ENST00000446368 407 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 AP000797.1-201ENST00000478870 387 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC-0.06□□□□□ -2.42
HSPG2P98160 RN7SKP258-201ENST00000517151 304 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC-0.06□□□□□ -2.42
HSPG2P98160 VN1R88P-201ENST00000596787 292 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 BNIP3P31-201ENST00000604515 566 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 AC097065.2-201ENST00000608159 533 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 MIR371B-201ENST00000638082 66 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 SNORD114-9-201ENST00000364370 72 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 RAP1BP3-201ENST00000407180 549 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 AL592310.1-201ENST00000414330 671 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC-0.06□□□□□ -2.42
HSPG2P98160 SKA2P1-201ENST00000425592 390 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC-0.06□□□□□ -2.42
HSPG2P98160 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC-0.06□□□□□ -2.42
HSPG2P98160 MTND1P22-201ENST00000510572 951 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 AC024589.1-201ENST00000512207 263 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 RNA5SP227-201ENST00000516184 113 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
HSPG2P98160 BPTFP1-201ENST00000579209 492 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.06□□□□□ -2.42
HSPG2P98160 SUMO2P14-201ENST00000604488 293 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 AC009269.6-201ENST00000621778 588 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 ZNF849P-201ENST00000594711 1566 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 RNU6-1280P-201ENST00000365211 107 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 TMSB4XP8-201ENST00000402089 135 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 TMSB4XP6-201ENST00000415187 135 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 AC096531.1-201ENST00000419107 107 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 AL590556.1-201ENST00000423231 483 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 TMSB4XP1-201ENST00000424567 135 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.06□□□□□ -2.42
HSPG2P98160 SUMO1P1-201ENST00000497904 306 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 AC105185.1-201ENST00000518705 535 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 AC007751.1-201ENST00000529260 376 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms