Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 RNU6-1290P-201ENST00000362957 109 ntBASIC3.82□□□□□ -1.8
ERVFC1P60507 RNU5B-2P-201ENST00000363036 113 ntBASIC3.82□□□□□ -1.8
ERVFC1P60507 Y_RNA.217-201ENST00000364214 105 ntBASIC3.82□□□□□ -1.8
ERVFC1P60507 RNU6-923P-201ENST00000364753 107 ntBASIC3.82□□□□□ -1.8
ERVFC1P60507 MIR329-1-201ENST00000385028 80 ntBASIC3.82□□□□□ -1.8
ERVFC1P60507 SNORD17-201ENST00000390930 237 ntBASIC3.82□□□□□ -1.8
ERVFC1P60507 UBA52P6-201ENST00000399822 382 ntBASIC3.82□□□□□ -1.8
ERVFC1P60507 OOSP1P1-201ENST00000423265 274 ntBASIC3.82□□□□□ -1.8
ERVFC1P60507 RPL27AP8-201ENST00000424277 446 ntBASIC3.82□□□□□ -1.8
ERVFC1P60507 RPL23AP95-201ENST00000426806 265 ntBASIC3.82□□□□□ -1.8
ERVFC1P60507 AC007919.1-201ENST00000429380 217 ntBASIC3.82□□□□□ -1.8
ERVFC1P60507 AC243964.1-201ENST00000441814 261 ntBASIC3.82□□□□□ -1.8
ERVFC1P60507 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.82□□□□□ -1.8
ERVFC1P60507 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.82□□□□□ -1.8
ERVFC1P60507 Y_RNA.641-201ENST00000459414 105 ntBASIC3.82□□□□□ -1.8
ERVFC1P60507 AP001486.1-201ENST00000463339 476 ntBASIC3.82□□□□□ -1.8
ERVFC1P60507 KC877373.1-201ENST00000479066 408 ntBASIC3.82□□□□□ -1.8
ERVFC1P60507 AL049873.1-201ENST00000480540 376 ntBASIC3.82□□□□□ -1.8
ERVFC1P60507 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.82□□□□□ -1.8
ERVFC1P60507 AP004607.1-201ENST00000524456 203 ntBASIC3.82□□□□□ -1.8
ERVFC1P60507 CYCSP39-201ENST00000565821 309 ntBASIC3.82□□□□□ -1.8
ERVFC1P60507 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.82□□□□□ -1.8
ERVFC1P60507 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.82□□□□□ -1.8
ERVFC1P60507 AC136601.2-201ENST00000604356 474 ntBASIC3.82□□□□□ -1.8
ERVFC1P60507 AP002826.1-201ENST00000608835 315 ntBASIC3.82□□□□□ -1.8
ERVFC1P60507 U4.6-201ENST00000621618 127 ntBASIC3.82□□□□□ -1.8
ERVFC1P60507 IGHVIII-44-202ENST00000636235 289 ntBASIC3.82□□□□□ -1.8
ERVFC1P60507 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.82□□□□□ -1.8
ERVFC1P60507 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.82□□□□□ -1.8
ERVFC1P60507 AC118273.1-201ENST00000525324 3006 ntBASIC3.82□□□□□ -1.8
ERVFC1P60507 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
ERVFC1P60507 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.82□□□□□ -1.8
ERVFC1P60507 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
ERVFC1P60507 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ERVFC1P60507 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ERVFC1P60507 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.82□□□□□ -1.8
ERVFC1P60507 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.81□□□□□ -1.8
ERVFC1P60507 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.81□□□□□ -1.8
ERVFC1P60507 AF127577.6-201ENST00000623352 2191 ntBASIC3.81□□□□□ -1.8
ERVFC1P60507 SNORD115-8-201ENST00000363856 82 ntBASIC3.81□□□□□ -1.8
ERVFC1P60507 SNORA38.1-201ENST00000364172 131 ntBASIC3.81□□□□□ -1.8
ERVFC1P60507 SNORD115-38-201ENST00000365037 82 ntBASIC3.81□□□□□ -1.8
ERVFC1P60507 RNU6-1175P-201ENST00000365200 107 ntBASIC3.81□□□□□ -1.8
ERVFC1P60507 SNORA29-201ENST00000384183 140 ntBASIC3.81□□□□□ -1.8
ERVFC1P60507 U8.10-201ENST00000384260 133 ntBASIC3.81□□□□□ -1.8
ERVFC1P60507 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
ERVFC1P60507 RNU6-159P-201ENST00000391080 106 ntBASIC3.81□□□□□ -1.8
ERVFC1P60507 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ERVFC1P60507 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.81□□□□□ -1.8
ERVFC1P60507 SNRPEP9-201ENST00000436794 238 ntBASIC3.81□□□□□ -1.8
ERVFC1P60507 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ERVFC1P60507 U3.44-201ENST00000458938 192 ntBASIC3.81□□□□□ -1.8
ERVFC1P60507 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.81□□□□□ -1.8
ERVFC1P60507 RNY3P16-201ENST00000516338 101 ntBASIC3.81□□□□□ -1.8
ERVFC1P60507 RNU1-103P-201ENST00000516502 125 ntBASIC3.81□□□□□ -1.8
ERVFC1P60507 RPL21P9-201ENST00000556149 474 ntBASIC3.81□□□□□ -1.8
ERVFC1P60507 MIR7112-201ENST00000616126 65 ntBASIC3.81□□□□□ -1.8
ERVFC1P60507 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.81□□□□□ -1.8
ERVFC1P60507 IPO8P1-201ENST00000455509 3109 ntBASIC3.81□□□□□ -1.8
ERVFC1P60507 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
ERVFC1P60507 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
ERVFC1P60507 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.8□□□□□ -1.8
ERVFC1P60507 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
ERVFC1P60507 RNU6-600P-201ENST00000362524 99 ntBASIC3.8□□□□□ -1.8
ERVFC1P60507 RNU6-527P-201ENST00000363425 104 ntBASIC3.8□□□□□ -1.8
ERVFC1P60507 RNU6-961P-201ENST00000363893 105 ntBASIC3.8□□□□□ -1.8
ERVFC1P60507 Y_RNA.262-201ENST00000364641 102 ntBASIC3.8□□□□□ -1.8
ERVFC1P60507 SNORD32A-201ENST00000364805 84 ntBASIC3.8□□□□□ -1.8
ERVFC1P60507 Y_RNA.308-201ENST00000365043 101 ntBASIC3.8□□□□□ -1.8
ERVFC1P60507 SNORD6-201ENST00000365444 73 ntBASIC3.8□□□□□ -1.8
ERVFC1P60507 RNU6-142P-201ENST00000384019 107 ntBASIC3.8□□□□□ -1.8
ERVFC1P60507 RNU6-541P-201ENST00000384709 110 ntBASIC3.8□□□□□ -1.8
ERVFC1P60507 MTHFD2P2-201ENST00000407725 247 ntBASIC3.8□□□□□ -1.8
ERVFC1P60507 AL590383.1-201ENST00000428602 75 ntBASIC3.8□□□□□ -1.8
ERVFC1P60507 POLR2KP2-201ENST00000438155 177 ntBASIC3.8□□□□□ -1.8
ERVFC1P60507 SNRPGP3-201ENST00000469405 227 ntBASIC3.8□□□□□ -1.8
ERVFC1P60507 TRBV12-2-201ENST00000489763 344 ntBASIC3.8□□□□□ -1.8
ERVFC1P60507 BTF3L4P4-201ENST00000506381 449 ntBASIC3.8□□□□□ -1.8
ERVFC1P60507 RNU6-1198P-201ENST00000516904 67 ntBASIC3.8□□□□□ -1.8
ERVFC1P60507 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.8□□□□□ -1.8
ERVFC1P60507 AL391261.3-201ENST00000557194 520 ntBASIC3.8□□□□□ -1.8
ERVFC1P60507 AC012493.2-201ENST00000595083 291 ntBASIC3.8□□□□□ -1.8
ERVFC1P60507 KLKP1-201ENST00000595979 403 ntBASIC3.8□□□□□ -1.8
ERVFC1P60507 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ERVFC1P60507 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ERVFC1P60507 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
ERVFC1P60507 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ERVFC1P60507 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
ERVFC1P60507 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ERVFC1P60507 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ERVFC1P60507 AL079305.1-201ENST00000623159 3008 ntBASIC3.79□□□□□ -1.8
ERVFC1P60507 AL109809.4-201ENST00000603520 2185 ntBASIC3.79□□□□□ -1.8
ERVFC1P60507 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.79□□□□□ -1.8
ERVFC1P60507 RNU6-942P-201ENST00000363002 107 ntBASIC3.79□□□□□ -1.8
ERVFC1P60507 Y_RNA.272-201ENST00000364696 102 ntBASIC3.79□□□□□ -1.8
ERVFC1P60507 Y_RNA.319-201ENST00000365138 92 ntBASIC3.79□□□□□ -1.8
ERVFC1P60507 Z98749.2-208ENST00000381646 500 ntBASIC3.79□□□□□ -1.8
ERVFC1P60507 MIR518D-201ENST00000385014 87 ntBASIC3.79□□□□□ -1.8
ERVFC1P60507 Y_RNA.597-201ENST00000410463 100 ntBASIC3.79□□□□□ -1.8
ERVFC1P60507 RNU6-735P-201ENST00000410612 107 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms