Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 RNU6-847P-201ENST00000411115 108 ntBASIC3.28□□□□□ -1.88
WNT3AP56704 RPL23AP95-201ENST00000426806 265 ntBASIC3.28□□□□□ -1.88
WNT3AP56704 SETP5-201ENST00000437270 562 ntBASIC3.28□□□□□ -1.88
WNT3AP56704 AL714022.1-201ENST00000439897 151 ntBASIC3.28□□□□□ -1.88
WNT3AP56704 RPL39P29-201ENST00000447779 157 ntBASIC3.28□□□□□ -1.88
WNT3AP56704 AC115115.1-201ENST00000449927 248 ntBASIC3.28□□□□□ -1.88
WNT3AP56704 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.28□□□□□ -1.88
WNT3AP56704 AP002884.2-201ENST00000471647 395 ntBASIC3.28□□□□□ -1.88
WNT3AP56704 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.28□□□□□ -1.88
WNT3AP56704 SCARNA20.6-201ENST00000517251 106 ntBASIC3.28□□□□□ -1.88
WNT3AP56704 AC093023.1-201ENST00000547375 507 ntBASIC3.28□□□□□ -1.88
WNT3AP56704 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.28□□□□□ -1.88
WNT3AP56704 MIR3128-201ENST00000581957 66 ntBASIC3.28□□□□□ -1.88
WNT3AP56704 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.28□□□□□ -1.88
WNT3AP56704 AC008739.3-201ENST00000603262 127 ntBASIC3.28□□□□□ -1.88
WNT3AP56704 AL359198.2-201ENST00000611836 194 ntBASIC3.28□□□□□ -1.88
WNT3AP56704 AC011476.5-201ENST00000615594 130 ntBASIC3.28□□□□□ -1.88
WNT3AP56704 U6.104-201ENST00000637979 90 ntBASIC3.28□□□□□ -1.88
WNT3AP56704 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
WNT3AP56704 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
WNT3AP56704 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.89
WNT3AP56704 AL353743.1-202ENST00000431724 1695 ntBASIC3.27□□□□□ -1.89
WNT3AP56704 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
WNT3AP56704 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.27□□□□□ -1.89
WNT3AP56704 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
WNT3AP56704 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.27□□□□□ -1.89
WNT3AP56704 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.27□□□□□ -1.89
WNT3AP56704 Y_RNA.14-201ENST00000362415 103 ntBASIC3.27□□□□□ -1.89
WNT3AP56704 Y_RNA.60-201ENST00000362831 98 ntBASIC3.27□□□□□ -1.89
WNT3AP56704 RNU6-1141P-201ENST00000364520 107 ntBASIC3.27□□□□□ -1.89
WNT3AP56704 RNU6-17P-201ENST00000384245 107 ntBASIC3.27□□□□□ -1.89
WNT3AP56704 RNU6-611P-201ENST00000384276 104 ntBASIC3.27□□□□□ -1.89
WNT3AP56704 RNU6-18P-201ENST00000384527 107 ntBASIC3.27□□□□□ -1.89
WNT3AP56704 RNU6-19P-201ENST00000384718 107 ntBASIC3.27□□□□□ -1.89
WNT3AP56704 MIR487A-201ENST00000385009 80 ntBASIC3.27□□□□□ -1.89
WNT3AP56704 MIR153-2-201ENST00000385225 87 ntBASIC3.27□□□□□ -1.89
WNT3AP56704 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.27□□□□□ -1.89
WNT3AP56704 RNU2-20P-201ENST00000410425 191 ntBASIC3.27□□□□□ -1.89
WNT3AP56704 RN7SKP27-201ENST00000410684 333 ntBASIC3.27□□□□□ -1.89
WNT3AP56704 PTGES3P4-201ENST00000426243 356 ntBASIC3.27□□□□□ -1.89
WNT3AP56704 AC017083.1-201ENST00000428093 483 ntBASIC3.27□□□□□ -1.89
WNT3AP56704 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.27□□□□□ -1.89
WNT3AP56704 snoU13.6-201ENST00000458785 104 ntBASIC3.27□□□□□ -1.89
WNT3AP56704 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.27□□□□□ -1.89
WNT3AP56704 AP000870.1-201ENST00000472927 406 ntBASIC3.27□□□□□ -1.89
WNT3AP56704 TRBVB-201ENST00000477100 408 ntBASIC3.27□□□□□ -1.89
WNT3AP56704 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.27□□□□□ -1.89
WNT3AP56704 AC016632.1-201ENST00000503994 196 ntBASIC3.27□□□□□ -1.89
WNT3AP56704 AP002770.2-201ENST00000543613 532 ntBASIC3.27□□□□□ -1.89
WNT3AP56704 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.27□□□□□ -1.89
WNT3AP56704 AL355877.2-201ENST00000603670 358 ntBASIC3.27□□□□□ -1.89
WNT3AP56704 RMST_6.1-201ENST00000611980 203 ntBASIC3.27□□□□□ -1.89
WNT3AP56704 AC091903.1-201ENST00000624322 454 ntBASIC3.27□□□□□ -1.89
WNT3AP56704 MTND5P6-201ENST00000422338 1798 ntBASIC3.27□□□□□ -1.89
WNT3AP56704 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
WNT3AP56704 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.27□□□□□ -1.89
WNT3AP56704 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
WNT3AP56704 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
WNT3AP56704 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.26□□□□□ -1.89
WNT3AP56704 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
WNT3AP56704 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
WNT3AP56704 RNU6-879P-201ENST00000364328 108 ntBASIC3.26□□□□□ -1.89
WNT3AP56704 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
WNT3AP56704 Y_RNA.439-201ENST00000384119 94 ntBASIC3.26□□□□□ -1.89
WNT3AP56704 MIR215-201ENST00000384858 110 ntBASIC3.26□□□□□ -1.89
WNT3AP56704 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
WNT3AP56704 SNORA11-201ENST00000408789 128 ntBASIC3.26□□□□□ -1.89
WNT3AP56704 AL159169.1-201ENST00000421119 127 ntBASIC3.26□□□□□ -1.89
WNT3AP56704 SDAD1P3-201ENST00000427380 333 ntBASIC3.26□□□□□ -1.89
WNT3AP56704 AC244670.1-201ENST00000436879 112 ntBASIC3.26□□□□□ -1.89
WNT3AP56704 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.26□□□□□ -1.89
WNT3AP56704 RNU7-23P-201ENST00000459465 62 ntBASIC3.26□□□□□ -1.89
WNT3AP56704 HMGB1P35-201ENST00000503360 598 ntBASIC3.26□□□□□ -1.89
WNT3AP56704 SNORA64.4-201ENST00000516632 81 ntBASIC3.26□□□□□ -1.89
WNT3AP56704 CKS1BP7-201ENST00000522230 235 ntBASIC3.26□□□□□ -1.89
WNT3AP56704 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.26□□□□□ -1.89
WNT3AP56704 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.26□□□□□ -1.89
WNT3AP56704 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.26□□□□□ -1.89
WNT3AP56704 AC023824.2-201ENST00000566185 400 ntBASIC3.26□□□□□ -1.89
WNT3AP56704 MIR2682-201ENST00000580305 110 ntBASIC3.26□□□□□ -1.89
WNT3AP56704 AC090897.2-201ENST00000581715 130 ntBASIC3.26□□□□□ -1.89
WNT3AP56704 AL356157.2-201ENST00000605122 111 ntBASIC3.26□□□□□ -1.89
WNT3AP56704 AL442067.1-201ENST00000613261 223 ntBASIC3.26□□□□□ -1.89
WNT3AP56704 MIR376A1-201ENST00000616574 68 ntBASIC3.26□□□□□ -1.89
WNT3AP56704 MIR6075-201ENST00000620782 95 ntBASIC3.26□□□□□ -1.89
WNT3AP56704 U6.98-201ENST00000637157 84 ntBASIC3.26□□□□□ -1.89
WNT3AP56704 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
WNT3AP56704 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.26□□□□□ -1.89
WNT3AP56704 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
WNT3AP56704 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.26□□□□□ -1.89
WNT3AP56704 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.26□□□□□ -1.89
WNT3AP56704 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
WNT3AP56704 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
WNT3AP56704 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
WNT3AP56704 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
WNT3AP56704 ZNF826P-207ENST00000622273 1910 ntBASIC3.25□□□□□ -1.89
WNT3AP56704 RNU6-212P-201ENST00000362642 104 ntBASIC3.25□□□□□ -1.89
WNT3AP56704 SNORD56.3-201ENST00000363507 71 ntBASIC3.25□□□□□ -1.89
WNT3AP56704 Y_RNA.143-201ENST00000363520 106 ntBASIC3.25□□□□□ -1.89
WNT3AP56704 SNORD115-32-201ENST00000364079 82 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms