Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.62□□□□□ -2.15
CDH4P55283 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.62□□□□□ -2.15
CDH4P55283 AC121247.2-201ENST00000604776 136 ntBASIC1.62□□□□□ -2.15
CDH4P55283 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
CDH4P55283 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.62□□□□□ -2.15
CDH4P55283 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.62□□□□□ -2.15
CDH4P55283 AC245060.5-201ENST00000610778 3293 ntBASIC1.62□□□□□ -2.15
CDH4P55283 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
CDH4P55283 Y_RNA.201-201ENST00000364052 96 ntBASIC1.61□□□□□ -2.15
CDH4P55283 RNU6-1303P-201ENST00000364841 107 ntBASIC1.61□□□□□ -2.15
CDH4P55283 RNU6-160P-201ENST00000384591 107 ntBASIC1.61□□□□□ -2.15
CDH4P55283 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.61□□□□□ -2.15
CDH4P55283 AC009310.1-201ENST00000414414 451 ntBASIC1.61□□□□□ -2.15
CDH4P55283 PIGFP2-201ENST00000421400 651 ntBASIC1.61□□□□□ -2.15
CDH4P55283 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.61□□□□□ -2.15
CDH4P55283 AL669831.1-202ENST00000428504 417 ntBASIC1.61□□□□□ -2.15
CDH4P55283 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.61□□□□□ -2.15
CDH4P55283 GTF2IP13-201ENST00000438487 386 ntBASIC1.61□□□□□ -2.15
CDH4P55283 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.61□□□□□ -2.15
CDH4P55283 PPP1R2P5-201ENST00000457256 603 ntBASIC1.61□□□□□ -2.15
CDH4P55283 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.61□□□□□ -2.15
CDH4P55283 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.61□□□□□ -2.15
CDH4P55283 AC098862.1-201ENST00000504991 413 ntBASIC1.61□□□□□ -2.15
CDH4P55283 MTND3P5-201ENST00000512798 333 ntBASIC1.61□□□□□ -2.15
CDH4P55283 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.61□□□□□ -2.15
CDH4P55283 RNU6-970P-201ENST00000516312 107 ntBASIC1.61□□□□□ -2.15
CDH4P55283 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.61□□□□□ -2.15
CDH4P55283 OSBPL9P5-201ENST00000542581 171 ntBASIC1.61□□□□□ -2.15
CDH4P55283 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.61□□□□□ -2.15
CDH4P55283 MTND3P12-201ENST00000559068 328 ntBASIC1.61□□□□□ -2.15
CDH4P55283 SNORD53B-201ENST00000577887 78 ntBASIC1.61□□□□□ -2.15
CDH4P55283 AL034555.1-201ENST00000604816 211 ntBASIC1.61□□□□□ -2.15
CDH4P55283 BX248123.2-201ENST00000606318 124 ntBASIC1.61□□□□□ -2.15
CDH4P55283 AC006566.1-201ENST00000608943 513 ntBASIC1.61□□□□□ -2.15
CDH4P55283 AC068944.2-201ENST00000610373 403 ntBASIC1.61□□□□□ -2.15
CDH4P55283 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
CDH4P55283 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.6□□□□□ -2.15
CDH4P55283 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
CDH4P55283 RNU6-181P-201ENST00000363225 107 ntBASIC1.6□□□□□ -2.15
CDH4P55283 RNU6-348P-201ENST00000384386 107 ntBASIC1.6□□□□□ -2.15
CDH4P55283 SNORA12-201ENST00000391162 147 ntBASIC1.6□□□□□ -2.15
CDH4P55283 AL357139.1-201ENST00000407792 426 ntBASIC1.6□□□□□ -2.15
CDH4P55283 RN7SKP142-201ENST00000411236 328 ntBASIC1.6□□□□□ -2.15
CDH4P55283 RNU6-293P-201ENST00000411259 106 ntBASIC1.6□□□□□ -2.15
CDH4P55283 MTCO2P34-201ENST00000421994 607 ntBASIC1.6□□□□□ -2.15
CDH4P55283 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CDH4P55283 AC133104.1-201ENST00000429100 218 ntBASIC1.6□□□□□ -2.15
CDH4P55283 AMD1P1-201ENST00000457220 922 ntBASIC1.6□□□□□ -2.15
CDH4P55283 AC145146.1-201ENST00000496370 254 ntBASIC1.6□□□□□ -2.15
CDH4P55283 AC008834.1-201ENST00000511612 175 ntBASIC1.6□□□□□ -2.15
CDH4P55283 RNVU1-2-201ENST00000516326 135 ntBASIC1.6□□□□□ -2.15
CDH4P55283 RNU6-445P-201ENST00000516949 107 ntBASIC1.6□□□□□ -2.15
CDH4P55283 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.6□□□□□ -2.15
CDH4P55283 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.6□□□□□ -2.15
CDH4P55283 Z84480.1-201ENST00000605131 311 ntBASIC1.6□□□□□ -2.15
CDH4P55283 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CDH4P55283 AL590240.4-201ENST00000616908 390 ntBASIC1.6□□□□□ -2.15
CDH4P55283 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
CDH4P55283 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.59□□□□□ -2.15
CDH4P55283 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CDH4P55283 CBX3P1-201ENST00000325243 554 ntBASIC1.59□□□□□ -2.15
CDH4P55283 RNU6-1285P-201ENST00000363480 105 ntBASIC1.59□□□□□ -2.15
CDH4P55283 RNU6-457P-201ENST00000363999 107 ntBASIC1.59□□□□□ -2.15
CDH4P55283 RNA5SP493-201ENST00000364115 91 ntBASIC1.59□□□□□ -2.15
CDH4P55283 RNU6-1029P-201ENST00000384109 107 ntBASIC1.59□□□□□ -2.15
CDH4P55283 RNU6-997P-201ENST00000384725 107 ntBASIC1.59□□□□□ -2.15
CDH4P55283 MIR517C-201ENST00000385103 95 ntBASIC1.59□□□□□ -2.15
CDH4P55283 SNORA48.1-201ENST00000390879 135 ntBASIC1.59□□□□□ -2.15
CDH4P55283 SNORA17.3-201ENST00000391159 129 ntBASIC1.59□□□□□ -2.15
CDH4P55283 AL033519.2-201ENST00000403958 392 ntBASIC1.59□□□□□ -2.15
CDH4P55283 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.59□□□□□ -2.15
CDH4P55283 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.59□□□□□ -2.15
CDH4P55283 AL596276.1-201ENST00000434465 418 ntBASIC1.59□□□□□ -2.15
CDH4P55283 AC243964.1-201ENST00000441814 261 ntBASIC1.59□□□□□ -2.15
CDH4P55283 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.59□□□□□ -2.15
CDH4P55283 USP9YP29-201ENST00000445112 563 ntBASIC1.59□□□□□ -2.15
CDH4P55283 AL035666.1-201ENST00000446195 348 ntBASIC1.59□□□□□ -2.15
CDH4P55283 RPS29P15-201ENST00000458329 171 ntBASIC1.59□□□□□ -2.15
CDH4P55283 RNU7-182P-201ENST00000459009 62 ntBASIC1.59□□□□□ -2.15
CDH4P55283 AC087884.1-201ENST00000469738 328 ntBASIC1.59□□□□□ -2.15
CDH4P55283 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.59□□□□□ -2.15
CDH4P55283 RNA5SP503-201ENST00000517047 117 ntBASIC1.59□□□□□ -2.15
CDH4P55283 RNA5SP490-201ENST00000517141 136 ntBASIC1.59□□□□□ -2.15
CDH4P55283 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.59□□□□□ -2.15
CDH4P55283 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.59□□□□□ -2.15
CDH4P55283 AP005435.4-201ENST00000529514 284 ntBASIC1.59□□□□□ -2.15
CDH4P55283 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.59□□□□□ -2.15
CDH4P55283 MIR4285-201ENST00000581001 85 ntBASIC1.59□□□□□ -2.15
CDH4P55283 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.59□□□□□ -2.15
CDH4P55283 AL590229.1-201ENST00000603497 542 ntBASIC1.59□□□□□ -2.15
CDH4P55283 AC107304.1-201ENST00000604229 296 ntBASIC1.59□□□□□ -2.15
CDH4P55283 AC018889.1-201ENST00000605372 397 ntBASIC1.59□□□□□ -2.15
CDH4P55283 AC073114.1-201ENST00000612027 490 ntBASIC1.59□□□□□ -2.15
CDH4P55283 AC136475.10-201ENST00000620253 385 ntBASIC1.59□□□□□ -2.15
CDH4P55283 SEPT14P19-203ENST00000633205 211 ntBASIC1.59□□□□□ -2.15
CDH4P55283 SNORD98-201ENST00000636377 67 ntBASIC1.59□□□□□ -2.15
CDH4P55283 AC233981.2-201ENST00000611524 1614 ntBASIC1.58□□□□□ -2.16
CDH4P55283 RNU4-15P-201ENST00000362613 141 ntBASIC1.58□□□□□ -2.16
CDH4P55283 RNU6-60P-201ENST00000364792 103 ntBASIC1.58□□□□□ -2.16
CDH4P55283 RNU4-48P-201ENST00000365559 182 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms