Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 SNORA5B-201ENST00000363786 132 ntBASIC3.05□□□□□ -1.92
COPAP53621 SNORD42.2-201ENST00000365570 69 ntBASIC3.05□□□□□ -1.92
COPAP53621 RNU6-1040P-201ENST00000383974 107 ntBASIC3.05□□□□□ -1.92
COPAP53621 RNU6-622P-201ENST00000384272 103 ntBASIC3.05□□□□□ -1.92
COPAP53621 RNU6-331P-201ENST00000384724 107 ntBASIC3.05□□□□□ -1.92
COPAP53621 RNU6-174P-201ENST00000410406 106 ntBASIC3.05□□□□□ -1.92
COPAP53621 RNU6-1140P-201ENST00000410517 106 ntBASIC3.05□□□□□ -1.92
COPAP53621 RNA5SP344-201ENST00000411081 104 ntBASIC3.05□□□□□ -1.92
COPAP53621 RPL23AP94-201ENST00000512518 302 ntBASIC3.05□□□□□ -1.92
COPAP53621 RNA5SP384-201ENST00000516615 116 ntBASIC3.05□□□□□ -1.92
COPAP53621 CKS1BP7-201ENST00000522230 235 ntBASIC3.05□□□□□ -1.92
COPAP53621 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.05□□□□□ -1.92
COPAP53621 MTCO3P13-201ENST00000577757 781 ntBASIC3.05□□□□□ -1.92
COPAP53621 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.05□□□□□ -1.92
COPAP53621 RPS15AP11-201ENST00000594193 385 ntBASIC3.05□□□□□ -1.92
COPAP53621 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.05□□□□□ -1.92
COPAP53621 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.05□□□□□ -1.92
COPAP53621 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.05□□□□□ -1.92
COPAP53621 AC099654.10-201ENST00000640395 161 ntBASIC3.05□□□□□ -1.92
COPAP53621 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
COPAP53621 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.05□□□□□ -1.92
COPAP53621 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.04□□□□□ -1.92
COPAP53621 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
COPAP53621 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
COPAP53621 Y_RNA.128-201ENST00000363391 112 ntBASIC3.04□□□□□ -1.92
COPAP53621 Y_RNA.197-201ENST00000364004 102 ntBASIC3.04□□□□□ -1.92
COPAP53621 Y_RNA.445-201ENST00000384168 102 ntBASIC3.04□□□□□ -1.92
COPAP53621 AP000275.1-201ENST00000411943 390 ntBASIC3.04□□□□□ -1.92
COPAP53621 Z98742.2-201ENST00000431564 187 ntBASIC3.04□□□□□ -1.92
COPAP53621 MIR2053-201ENST00000459295 91 ntBASIC3.04□□□□□ -1.92
COPAP53621 AC103975.1-201ENST00000482506 483 ntBASIC3.04□□□□□ -1.92
COPAP53621 RPL36AP48-201ENST00000485521 314 ntBASIC3.04□□□□□ -1.92
COPAP53621 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.04□□□□□ -1.92
COPAP53621 SCARNA17.1-201ENST00000516211 143 ntBASIC3.04□□□□□ -1.92
COPAP53621 SNORA31.6-201ENST00000516241 130 ntBASIC3.04□□□□□ -1.92
COPAP53621 SCARNA17.2-201ENST00000516334 143 ntBASIC3.04□□□□□ -1.92
COPAP53621 RNU6-264P-201ENST00000517134 104 ntBASIC3.04□□□□□ -1.92
COPAP53621 MIR4513-201ENST00000581077 86 ntBASIC3.04□□□□□ -1.92
COPAP53621 SCARNA17.4-201ENST00000614296 143 ntBASIC3.04□□□□□ -1.92
COPAP53621 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
COPAP53621 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.04□□□□□ -1.92
COPAP53621 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.04□□□□□ -1.92
COPAP53621 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.04□□□□□ -1.92
COPAP53621 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.04□□□□□ -1.92
COPAP53621 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
COPAP53621 MTND4P27-201ENST00000450813 1354 ntBASIC3.03□□□□□ -1.92
COPAP53621 AC009541.1-201ENST00000438279 2662 ntBASIC3.03□□□□□ -1.92
COPAP53621 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.03□□□□□ -1.92
COPAP53621 SNORD114-19-201ENST00000363072 75 ntBASIC3.03□□□□□ -1.92
COPAP53621 RNU6-1083P-201ENST00000384022 107 ntBASIC3.03□□□□□ -1.92
COPAP53621 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
COPAP53621 MIR548P-201ENST00000408336 84 ntBASIC3.03□□□□□ -1.92
COPAP53621 RNA5SP274-201ENST00000410484 108 ntBASIC3.03□□□□□ -1.92
COPAP53621 EIF4EP2-201ENST00000422816 654 ntBASIC3.03□□□□□ -1.92
COPAP53621 BX276092.3-201ENST00000424182 230 ntBASIC3.03□□□□□ -1.92
COPAP53621 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.03□□□□□ -1.92
COPAP53621 AC022018.1-201ENST00000430685 241 ntBASIC3.03□□□□□ -1.92
COPAP53621 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.03□□□□□ -1.92
COPAP53621 AL135938.1-201ENST00000443141 297 ntBASIC3.03□□□□□ -1.92
COPAP53621 RPL39P29-201ENST00000447779 157 ntBASIC3.03□□□□□ -1.92
COPAP53621 Y_RNA.631-201ENST00000459607 101 ntBASIC3.03□□□□□ -1.92
COPAP53621 AC112771.1-201ENST00000463581 102 ntBASIC3.03□□□□□ -1.92
COPAP53621 RPS29P27-201ENST00000463711 170 ntBASIC3.03□□□□□ -1.92
COPAP53621 AIG1P1-201ENST00000503376 148 ntBASIC3.03□□□□□ -1.92
COPAP53621 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.03□□□□□ -1.92
COPAP53621 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.03□□□□□ -1.92
COPAP53621 RNU6-976P-201ENST00000516086 111 ntBASIC3.03□□□□□ -1.92
COPAP53621 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.03□□□□□ -1.92
COPAP53621 MIR4765-201ENST00000585007 77 ntBASIC3.03□□□□□ -1.92
COPAP53621 AC007792.1-201ENST00000623023 402 ntBASIC3.03□□□□□ -1.92
COPAP53621 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
COPAP53621 AL109809.4-201ENST00000603520 2185 ntBASIC3.02□□□□□ -1.93
COPAP53621 AL365361.1-201ENST00000566942 3481 ntBASIC3.02□□□□□ -1.93
COPAP53621 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
COPAP53621 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
COPAP53621 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
COPAP53621 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
COPAP53621 Y_RNA.123-201ENST00000363338 102 ntBASIC3.02□□□□□ -1.93
COPAP53621 RNU6-1222P-201ENST00000384615 107 ntBASIC3.02□□□□□ -1.93
COPAP53621 SNORA41-201ENST00000384675 132 ntBASIC3.02□□□□□ -1.93
COPAP53621 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.02□□□□□ -1.93
COPAP53621 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.02□□□□□ -1.93
COPAP53621 AL031659.1-201ENST00000447075 539 ntBASIC3.02□□□□□ -1.93
COPAP53621 FO393415.2-201ENST00000480085 343 ntBASIC3.02□□□□□ -1.93
COPAP53621 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.02□□□□□ -1.93
COPAP53621 AC091826.1-201ENST00000514065 313 ntBASIC3.02□□□□□ -1.93
COPAP53621 RNU6-470P-201ENST00000515954 104 ntBASIC3.02□□□□□ -1.93
COPAP53621 AC109329.2-201ENST00000519658 482 ntBASIC3.02□□□□□ -1.93
COPAP53621 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.02□□□□□ -1.93
COPAP53621 MIR4672-201ENST00000583126 81 ntBASIC3.02□□□□□ -1.93
COPAP53621 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.02□□□□□ -1.93
COPAP53621 AC006023.1-201ENST00000603944 259 ntBASIC3.02□□□□□ -1.93
COPAP53621 AL449363.1-201ENST00000617815 186 ntBASIC3.02□□□□□ -1.93
COPAP53621 AL359854.1-201ENST00000614203 1594 ntBASIC3.02□□□□□ -1.93
COPAP53621 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
COPAP53621 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.01□□□□□ -1.93
COPAP53621 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
COPAP53621 RNU6-461P-201ENST00000364195 107 ntBASIC3.01□□□□□ -1.93
COPAP53621 Y_RNA.395-201ENST00000383945 109 ntBASIC3.01□□□□□ -1.93
COPAP53621 AL590004.1-201ENST00000405321 300 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms